Carg27890 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCTTGTTGGGATCTATGAGAGCATGGGACACAGTGGTGTATGAGTTCAAGGAGGAGGAGATGAAGAAGGAGAAGAAGGCGTTATTCACAATCCACCAAAGAGTAGATGGCACCACGTTTGAGTTGATCGTCCATGCAAAATCTTCTGAGAATGCTTGGGAGGTCTGGAGAAAGACTTTGATGGTTTAGATAGAGTGAAGAAAATCTGCTTGCAATATTTACCCGTAGATTTTGAGGCTCTACATCAAGAAGATTCAACATCAATATGTGTTTACTTCCATTGTGTAAACTCCATTGTGTAAGAAATGAGAAGACATGACGAGAAGGTAGAAGAAGTACGAGTTGTGGAGAAGATTATGTGATTTTTACACTCAAGGTTTGACTACATTGCTGTGGAAGTTGAAGAATCTAATAAACTTGAAGAAATATTAGTAGAGGAGCTTCAAGACTCTATACAAGTCTATGAAGAAAGAGGCTTAGAGAAAGAAGAAAGAAGACGTATGGAGCAAGCACTGCAAGCCAACTCTTCCCAAAAGATGGATGGCTAG ATGGAGGCCTTGTTGGGATCTATGAGAGCATGGGACACAGTGGTGTATGAGTTCAAGGAGGAGGAGATGAAGAAGGAGAAGAAGGCGTTATTCACAATCCACCAAAGAGTAGATGGCACCACGTTTGAGTTGATCGTCCATGCAAAATCTTCTGAGAATGCTTGGGAGATTTTGAGGCTCTACATCAAGAAGATTCAACATCAATATGTGTTTACTTCCATTGTGTTTGACTACATTGCTGTGGAAGTTGAAGAATCTAATAAACTTGAAGAAATATTAGTAGAGGAGCTTCAAGACTCTATACAAGTCTATGAAGAAAGAGGCTTAGAGAAAGAAGAAAGAAGACGTATGGAGCAAGCACTGCAAGCCAACTCTTCCCAAAAGATGGATGGCTAG ATGGAGGCCTTGTTGGGATCTATGAGAGCATGGGACACAGTGGTGTATGAGTTCAAGGAGGAGGAGATGAAGAAGGAGAAGAAGGCGTTATTCACAATCCACCAAAGAGTAGATGGCACCACGTTTGAGTTGATCGTCCATGCAAAATCTTCTGAGAATGCTTGGGAGATTTTGAGGCTCTACATCAAGAAGATTCAACATCAATATGTGTTTACTTCCATTGTGTTTGACTACATTGCTGTGGAAGTTGAAGAATCTAATAAACTTGAAGAAATATTAGTAGAGGAGCTTCAAGACTCTATACAAGTCTATGAAGAAAGAGGCTTAGAGAAAGAAGAAAGAAGACGTATGGAGCAAGCACTGCAAGCCAACTCTTCCCAAAAGATGGATGGCTAG MEALLGSMRAWDTVVYEFKEEEMKKEKKALFTIHQRVDGTTFELIVHAKSSENAWEILRLYIKKIQHQYVFTSIVFDYIAVEVEESNKLEEILVEELQDSIQVYEERGLEKEERRRMEQALQANSSQKMDG Homology
BLAST of Carg27890 vs. NCBI nr
Match: KAG7023994.1 (hypothetical protein SDJN02_15022, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 247.3 bits (630), Expect = 7.4e-62 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Carg27890 vs. NCBI nr
Match: XP_042418650.1 (uncharacterized protein LOC122006990 [Zingiber officinale]) HSP 1 Score: 72.4 bits (176), Expect = 3.3e-09 Identity = 65/195 (33.33%), Postives = 88/195 (45.13%), Query Frame = 0
BLAST of Carg27890 vs. NCBI nr
Match: XP_019419448.1 (PREDICTED: uncharacterized protein LOC109329946 [Lupinus angustifolius]) HSP 1 Score: 72.0 bits (175), Expect = 4.3e-09 Identity = 47/125 (37.60%), Postives = 80/125 (64.00%), Query Frame = 0
BLAST of Carg27890 vs. NCBI nr
Match: KHN11212.1 (hypothetical protein glysoja_034441, partial [Glycine soja]) HSP 1 Score: 68.2 bits (165), Expect = 6.1e-08 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Carg27890 vs. NCBI nr
Match: XP_019462948.1 (PREDICTED: uncharacterized protein LOC109361872 [Lupinus angustifolius]) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-07 Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0
BLAST of Carg27890 vs. ExPASy TrEMBL
Match: A0A0B2PUL3 (Uncharacterized protein (Fragment) OS=Glycine soja OX=3848 GN=glysoja_034441 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.0e-08 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Carg27890 vs. ExPASy TrEMBL
Match: A0A6A2XI87 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117010pilonHSYRG00118 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07 Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 0
BLAST of Carg27890 vs. ExPASy TrEMBL
Match: A0A6A3ASR7 (TMV resistance protein N-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110377pilonHSYRG00342 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.9e-07 Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 0
BLAST of Carg27890 vs. ExPASy TrEMBL
Match: A0A392NYH4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0025357 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.5e-07 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Carg27890 vs. ExPASy TrEMBL
Match: A0A6I9RF49 (uncharacterized protein LOC105048038 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105048038 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.3e-07 Identity = 59/193 (30.57%), Postives = 86/193 (44.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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