Carg25383 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25383
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	KH domain-containing protein
Location	Carg_Chr16: 5236892 .. 5240540 (-)
RNA-Seq Expression	Carg25383
Synteny	Carg25383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCCCTTTCTTTCTGCAAAGGTACGCTTCTTTCTCTATCTGGGTCGCTCTGTTCTTCGTTGGATATCTTAATTTCACTCTTCTTCTCCACTTATTAACCCAATTCCACTTCTGGGTTCCTTCTATTTTGTTGTGTTCTTCAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTTCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGGTAATTTCCCTTTCTCTGTTTCTCAATTCTTCATCATGATTTGCTTTTTGTTTTGTTTTTTTTTGTTTTTTGGACTGCTTGATTCAGATTCCTTGTTTGATTGATCATGTCATTCTGTTTTTATCCCACTTTTTAACTCTCTTGTGTTGGTTTGATCATCTTTGTCATTGCATTTGAATACTGACTAGAAGCCCTATTGAGCTTTTAGTGATGTTGTGTTGTGTGACAATGGCAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGGTGGGGTTATAAGATCTCTACTATTGCATTATGTTGTTGCAATACTTATTATTGTTTCTTGTAGTTTGGATTATTTGTTCCTTTGAAGTTTATTATGGGTAGACACTGTTTTCTTGATCATTTGAACAAATTTAATTACAACCGAGCATACGATTAGAGAAGCAAACGAGTAACGATCAATTGGGAAGAAGTTTTTTACTCCCTCGACTCGAGAATGGACTGGTATGTGAATTATATATCGAAAATACATGAGATTAGATGATCGGAACTGAAGTTTCGTGGAGAGGCTACGAACAAGGGGACATTTTGTGGCTATGTATTGCAATGGGAATGTTGTCTGAGGAGAGGTTGGAAGTCAGTCTTTGTGACACGGAGTTAAGCGTTCTCATTGTTTGTTGGCAGCTATTAAATACTAGCCTTATCTTATATCATTGAGTTGTAATGTGGGTCGGGTCAATCTAAGTTTAAGCTTAGCCTGTTATTAGAGCTAGACACTGGGTGGTGTGCTAGCGAGGACGATGGGCCTCCAAGGAGGGTGGGTTGTGAAATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACTTGTTCTAAAAACCTTGAGGGAATGCTCGGAAGGGAAACCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCGGTTACACTAAGGCCTACTATGTCCAAGAGCGTTTCATTTTCTCTGTGTGGATGGAGCCAAAGATGAATCCTATTGGCCTACTCGATACTTTGTCAAGTCGTAATTAATTAGACAAAATCAATTACCATAAGATGACGTTAACTTGTGATGATGTCATGAATCTGAGACATGAGACATGAGACATGATCGTGAGAAAAGTTCCCAATGACGGGTAATTTTTCATGAATAGCTAGCCATTTATCTTCGGAGTCGTCATCTTACACGAGTATTTGCTTAGTCAGTTGCATGTGCACTCCTTATATAAGACGAGCATTCTCTTAGTCAATTGCATGTGCACGCCTTATTTATTACATCTCATTTCAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACAAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATATATATTTGTCCTTGATCTACTTCTTTTCCGTGTTGCTAGTTTTTCGATATGAACGCTTTCTCGTTGATCCCTATTTTCTTTGTATAAGGATATTTTTCTAAAAATGGAAAACTTAAACTTTCTTTTAAATGAATGAAAGAATACAATACAGAAAGACAATAGCCTAGATTTGAGATACAAGTGTTTCGAGTTATTAAATTTTCATCTCGAGGGCTTGAATTCAGACCTTTGTAGGGTATCTCCAAACATCCCGAGCCATTACTACTGGGGAATTCCTTGGTTCTAACCTATGTATCCTTAAAATAGAATAAGTAGTTCTTCGTGTTTTGAAACAGAACCATAGAATAAGTAACGTATCTATGACAACATGTGTGCAACACTTGGACACTCTATGTAACAACCTAAGCTCACCGCTAGCAGATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTCCCTTATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTTCAAGGTTTGGACACTCTATGTAACAGCCTAAGTCCACCACTAGCAGATATTGTCCTCTTTGGGCATTCCCTCAAAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGGCTCGTTCTCCTCCCCAATCGATGTGGGATCTCATAATAAATAGACACGAACGGTAATAGAACAAAAATTAATAGATTTTTGGAGTGAAATACATTAAACTCATACATGCATACATTTCAATAAATGTGTACTTGTCGTATCCGTGTCCTTGATTTTTTTTAGAAACCCGTGCTTAATGACATGTTTACGGCAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACGTGAGTCGATATTCTTACGTTAGGTGATGATATTACTGACCTTTTGCCTCTCTGATGTTCATAGTTTGTTGCTTAAATCATGTCAGTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTGGAGGTACTAAAAGTTTTGAATCTCCTAGTCCTAACTTAAATCTTCAATAGTACTTACAATGGATCTGAATGTTGTGTGCTTTAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGTATGAACTAAACAACGCCCACATCGACTAAACCTCTGATCGTTTTATTATGAAGTCGTGTTCTTATGGAGTTGTTGTGTATTCCAGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAAGGTAAGGTAAGGTAAGGTAAGGTAAGGAGTAATGACGAGCTTCGTGGTCGACACTGTGTCGGTTGAAACCACCTTGAGAGCTTTTGGTGCCTTCTTGTCTTCAGCAGATGGTCAAGAATTTTGCTGATTTTGCTGTGCTAAATCTGATAGATAGGCTTATGTTATGCTATTTGGCTGACCACTTTTTCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCCCAATTCAACATTTTTTCATTTTTTTTTTTTTT

mRNA sequence

CCCCCCCCTTTCTTTCTGCAAAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTTCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACAAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTGGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAAGGTAAGGTAAGGTAAGGTAAGGTAAGGAGTAATGACGAGCTTCGTGGTCGACACTGTGTCGGTTGAAACCACCTTGAGAGCTTTTGGTGCCTTCTTGTCTTCAGCAGATGGTCAAGAATTTTGCTGATTTTGCTGTGCTAAATCTGATAGATAGGCTTATGTTATGCTATTTGGCTGACCACTTTTTCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCCCAATTCAACATTTTTTCATTTTTTTTTTTTTT

Coding sequence (CDS)

CCCCCCCCTTTCTTTCTGCAAAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTTCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACAAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTGGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAA

Protein sequence

PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR

Homology

[Close]

BLAST of Carg25383 vs. NCBI nr
Match: KAG7015451.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613.2 bits (1580), Expect = 1.2e-171
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF 60
           PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF
Sbjct: 1   PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF 60

Query: 61  VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME 120
           VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME
Sbjct: 61  VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME 120

Query: 121 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 180
           GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS
Sbjct: 121 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 180

Query: 181 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 240
           LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD
Sbjct: 181 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 240

Query: 241 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 300
           HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG
Sbjct: 241 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 300

Query: 301 R 302
           R
Sbjct: 301 R 301

[Close]

BLAST of Carg25383 vs. NCBI nr
Match: KAG6577363.1 (Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 609.8 bits (1571), Expect = 1.3e-170
Identity = 299/301 (99.34%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF 60
           PPPFFLQSLCVMGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPF
Sbjct: 227 PPPFFLQSLCVMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPF 286

Query: 61  VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME 120
           VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQME
Sbjct: 287 VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQME 346

Query: 121 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 180
           GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS
Sbjct: 347 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 406

Query: 181 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 240
           LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD
Sbjct: 407 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 466

Query: 241 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 300
           HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG
Sbjct: 467 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 526

Query: 301 R 302
           R
Sbjct: 527 R 527

[Close]

BLAST of Carg25383 vs. NCBI nr
Match: XP_022929365.1 (KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita moschata] >XP_022929366.1 KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita moschata] >XP_022929367.1 KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita moschata] >XP_023551891.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 585.9 bits (1509), Expect = 2.0e-163
Identity = 288/290 (99.31%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of Carg25383 vs. NCBI nr
Match: XP_022984815.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima])

HSP 1 Score: 584.3 bits (1505), Expect = 5.9e-163
Identity = 286/290 (98.62%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEI+RLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIKRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQGGIPATP+VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPVVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of Carg25383 vs. NCBI nr
Match: KAG6600718.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580.9 bits (1496), Expect = 6.5e-162
Identity = 286/297 (96.30%), Postives = 291/297 (97.98%), Query Frame = 0


Query: 5   FLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVL 64
           FL+SLC+MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVL
Sbjct: 32  FLRSLCMMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVL 91

Query: 65  PHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGH 124
           PHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGH
Sbjct: 92  PHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGH 151

Query: 125 VHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRV 184
           VH +G LQAHSM WPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRV
Sbjct: 152 VHSLGPLQAHSMAWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRV 211

Query: 185 EALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVA 244
           EALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVA
Sbjct: 212 EALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVA 271

Query: 245 VLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           VLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 272 VLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 327

[Close]

BLAST of Carg25383 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.4e-98
Identity = 190/295 (64.41%), Postives = 227/295 (76.95%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 132 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 191
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 192 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 251
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 252 KPVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 300
           KP+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of Carg25383 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.3e-76
Identity = 164/283 (57.95%), Postives = 196/283 (69.26%), Query Frame = 0


Query: 27  PSSHASPH-RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGL--NQ 86
           PS  ASP  RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++G+  NQ
Sbjct: 12  PSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQ 71

Query: 87  TSVDHERFEH--GSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 146
              D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +M W   
Sbjct: 72  GFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------AMEWQ-- 131

Query: 147 QGGIPATPI---VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 206
             G PA+P    VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRGKG
Sbjct: 132 --GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 191

Query: 207 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 266
           SIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE  D
Sbjct: 192 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 251

Query: 267 QYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
             K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 252 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Carg25383 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.4e-74
Identity = 156/292 (53.42%), Postives = 199/292 (68.15%), Query Frame = 0


Query: 19  GSYFHYP-----PPSSHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 78
           G +  YP     PPS+  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 79  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHG 138
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW   Q      V  
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSV-- 142

Query: 139 MGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEAL 198
             S   + +  P    G+    IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA 
Sbjct: 143 SSSPAPNWLNSPGSSSGL----IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAS 202

Query: 199 TECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLE 258
           T+CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+
Sbjct: 203 TDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 262

Query: 259 SLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 300
            LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 DLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Carg25383 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.0e-72
Identity = 155/282 (54.96%), Postives = 195/282 (69.15%), Query Frame = 0


Query: 27  PSSHASPHRTPSIPLDRE-RYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 86
           P+ + SP +  S P D + +YLAELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 87  ---SVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 146
                D  RF   SP  S    SN        W  +      H   +G  Q  SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGL------HQERLGFPQGTSMDW--- 130

Query: 147 QGG--IPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGS 206
           QG    P++ +VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGS
Sbjct: 131 QGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGS 190

Query: 207 IKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQ 266
           IKD  +E+KL+ KPGYEHL++PLH+L+EAEFP   I++RL HA  V+E LLKPVDE  D 
Sbjct: 191 IKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDF 250

Query: 267 YKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           YK+QQLRELA+LN TLRE+SP    S+SPF++ G+KRAKTG+
Sbjct: 251 YKRQQLRELAMLNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Carg25383 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.3e-71
Identity = 150/282 (53.19%), Postives = 190/282 (67.38%), Query Frame = 0


Query: 26  PPSSHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 85
           PPS+  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 86  GL--NQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMG 145
            L  N T +     +H SP  S G   N R  D+ GW              G    +S  
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGPNWLNS-- 158

Query: 146 WPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGK 205
            P    G+    I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+
Sbjct: 159 -PGSSSGL----IAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 218

Query: 206 GSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELL 265
           GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  
Sbjct: 219 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 278

Query: 266 DQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 300
           D YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of Carg25383 vs. ExPASy TrEMBL
Match: A0A6J1EMX9 (KH domain-containing protein At1g09660/At1g09670-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435962 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 9.8e-164
Identity = 288/290 (99.31%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of Carg25383 vs. ExPASy TrEMBL
Match: A0A6J1J9M0 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=3661 GN=LOC111482986 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.8e-163
Identity = 286/290 (98.62%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEI+RLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIKRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQGGIPATP+VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPVVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of Carg25383 vs. ExPASy TrEMBL
Match: A0A0A0L3B7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.8e-163
Identity = 289/301 (96.01%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF 60
           P   FL+SLCVMGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPF
Sbjct: 100 PSSLFLRSLCVMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPF 159

Query: 61  VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME 120
           VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPPMQME
Sbjct: 160 VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQME 219

Query: 121 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 180
           GSGHVHGMG LQAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS
Sbjct: 220 GSGHVHGMGPLQAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 279

Query: 181 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 240
           LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD
Sbjct: 280 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLD 339

Query: 241 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 300
           HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG
Sbjct: 340 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 399

Query: 301 R 302
           R
Sbjct: 400 R 399

[Close]

BLAST of Carg25383 vs. ExPASy TrEMBL
Match: A0A5D3BT43 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00980 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.5e-159
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPPMQMEGSGHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Carg25383 vs. ExPASy TrEMBL
Match: A0A1S3BST0 (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.5e-159
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPPMQMEGSGHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of Carg25383 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 360.9 bits (925), Expect = 9.8e-100
Identity = 190/295 (64.41%), Postives = 227/295 (76.95%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 132 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 191
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 192 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 251
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 252 KPVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 300
           KP+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of Carg25383 vs. TAIR 10
Match: AT1G09660.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 305.1 bits (780), Expect = 6.4e-83
Identity = 155/243 (63.79%), Postives = 187/243 (76.95%), Query Frame = 0


Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 132 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 191
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 192 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 251
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 247

Query: 252 KPV 254
           KP+
Sbjct: 251 KPM 247

[Close]

BLAST of Carg25383 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-77
Identity = 164/283 (57.95%), Postives = 196/283 (69.26%), Query Frame = 0


Query: 27  PSSHASPH-RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGL--NQ 86
           PS  ASP  RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++G+  NQ
Sbjct: 12  PSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQ 71

Query: 87  TSVDHERFEH--GSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 146
              D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +M W   
Sbjct: 72  GFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------AMEWQ-- 131

Query: 147 QGGIPATPI---VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 206
             G PA+P    VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRGKG
Sbjct: 132 --GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 191

Query: 207 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 266
           SIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE  D
Sbjct: 192 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 251

Query: 267 QYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 302
             K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 252 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Carg25383 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-75
Identity = 156/292 (53.42%), Postives = 199/292 (68.15%), Query Frame = 0


Query: 19  GSYFHYP-----PPSSHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 78
           G +  YP     PPS+  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 79  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHG 138
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW   Q      V  
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSV-- 142

Query: 139 MGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEAL 198
             S   + +  P    G+    IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA 
Sbjct: 143 SSSPAPNWLNSPGSSSGL----IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAS 202

Query: 199 TECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLE 258
           T+CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+
Sbjct: 203 TDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 262

Query: 259 SLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 300
            LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 DLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Carg25383 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 268.5 bits (685), Expect = 6.6e-72
Identity = 150/282 (53.19%), Postives = 190/282 (67.38%), Query Frame = 0


Query: 26  PPSSHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 85
           PPS+  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 86  GL--NQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMG 145
            L  N T +     +H SP  S G   N R  D+ GW              G    +S  
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGPNWLNS-- 158

Query: 146 WPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGK 205
            P    G+    I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+
Sbjct: 159 -PGSSSGL----IAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 218

Query: 206 GSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELL 265
           GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  
Sbjct: 219 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 278

Query: 266 DQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 300
           D YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Carg25383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015451.1	1.2e-171	100.00	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6577363.1	1.3e-170	99.34	Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022929365.1	2.0e-163	99.31	KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita mosc...	[more]
XP_022984815.1	5.9e-163	98.62	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima]	[more]
KAG6600718.1	6.5e-162	96.30	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg25383 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR3	1.4e-98	64.41	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]
Q8GYR4	3.3e-76	57.95	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q0WLR1	2.4e-74	53.42	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q75GR5	5.0e-72	54.96	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	9.3e-71	53.19	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Carg25383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMX9	9.8e-164	99.31	KH domain-containing protein At1g09660/At1g09670-like isoform X1 OS=Cucurbita mo...	[more]
A0A6J1J9M0	2.8e-163	98.62	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=366...	[more]
A0A0A0L3B7	2.8e-163	96.01	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=...	[more]
A0A5D3BT43	5.5e-159	97.24	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BST0	5.5e-159	97.24	KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Carg25383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09660.1	9.8e-100	64.41	RNA-binding KH domain-containing protein	[more]
AT1G09660.2	6.4e-83	63.79	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	2.4e-77	57.95	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.7e-75	53.42	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	6.6e-72	53.19	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 151..251 e-value: 0.0017 score: 27.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 40..283 e-value: 2.1E-68 score: 232.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 157..276
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 45..79 e-value: 3.8E-10 score: 39.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..301
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 18..301
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 156..276 e-value: 3.28574E-51 score: 162.798
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 18..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25383-RA	Carg25383-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding