Carg24568 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24568
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Non-specific lipid-transfer protein-like protein
Location	Carg_Chr19: 2101645 .. 2102671 (+)
RNA-Seq Expression	Carg24568
Synteny	Carg24568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCCCCACTTCTCCTTTCCCATTTCCCCCACTGACCTTTCCCTTTCTCTCTTTCCTCTCAGAAATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCGCTCTGGCTGTCTTCTCTCTAGATCTCTCCGCTGTCTCCGCCGCTCACGATGCTCCAGCGCCGGCTGTGGACTGCTCCAGCCTCATCCTTAACATGGCCGACTGCCTCTCCTTTGTCTCCAACGACAGTACCACCACCAAGCCCGAAGGATCCTGCTGCACTGGCCTCAAGACTGTTCTCAAAGCCGACGCTGACTGCCTCTGCCAGGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTCTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATGTAAGACTAATTCCTCCAAATTGCTCTTTCAATTTCGATTTTGAGAAAAATGAAACCCTAGGTAAATGAGGAACTGATCTATTTGAGTGAAATCTTTGATTTCTTTTTGTTTTCTCAGTGTCGAACTCTCCTGCTGGTTCTCCTGGTACGATTTCTTCTCTAAACGCTTTTCGATTAGTCTTAATCTTAGTCTGATGATACCGATCTGGATTTCGGAATGTTTGTGAGGAAATGTCTGAGCGTTTATTCTATTTGCATGCAGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCAGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGGTGTCAGTTGGATCTGTAATCGGCGCCATAGGAGTTGCTCTGTTGAGCAGTTTCTGAGGGGCATGCGGCGTCGTTTTGGTTGGGAGAGAAGGAGAATTTGGGGAAAATTAAATTTGTTTTCTGTGTTTTTATTTTGTGGAAGGGAAAATTTGTTGGCAGTGTTTGGCTTTGGGTTCCTTTCTCTATGGGTATAATTTATGGCGTGTGACTCAAAGCAGATTATAATATTTAATTTTTTTAGTCTTTC

mRNA sequence

ACTTCCCCACTTCTCCTTTCCCATTTCCCCCACTGACCTTTCCCTTTCTCTCTTTCCTCTCAGAAATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCGCTCTGGCTGTCTTCTCTCTAGATCTCTCCGCTGTCTCCGCCGCTCACGATGCTCCAGCGCCGGCTGTGGACTGCTCCAGCCTCATCCTTAACATGGCCGACTGCCTCTCCTTTGTCTCCAACGACAGTACCACCACCAAGCCCGAAGGATCCTGCTGCACTGGCCTCAAGACTGTTCTCAAAGCCGACGCTGACTGCCTCTGCCAGGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTCTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATTGTCGAACTCTCCTGCTGGTTCTCCTGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCAGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGGTGTCAGTTGGATCTGTAATCGGCGCCATAGGAGTTGCTCTGTTGAGCAGTTTCTGAGGGGCATGCGGCGTCGTTTTGGTTGGGAGAGAAGGAGAATTTGGGGAAAATTAAATTTGTTTTCTGTGTTTTTATTTTGTGGAAGGGAAAATTTGTTGGCAGTGTTTGGCTTTGGGTTCCTTTCTCTATGGGTATAATTTATGGCGTGTGACTCAAAGCAGATTATAATATTTAATTTTTTTAGTCTTTC

Coding sequence (CDS)

ATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCGCTCTGGCTGTCTTCTCTCTAGATCTCTCCGCTGTCTCCGCCGCTCACGATGCTCCAGCGCCGGCTGTGGACTGCTCCAGCCTCATCCTTAACATGGCCGACTGCCTCTCCTTTGTCTCCAACGACAGTACCACCACCAAGCCCGAAGGATCCTGCTGCACTGGCCTCAAGACTGTTCTCAAAGCCGACGCTGACTGCCTCTGCCAGGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTCTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATTGTCGAACTCTCCTGCTGGTTCTCCTGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCAGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGGTGTCAGTTGGATCTGTAATCGGCGCCATAGGAGTTGCTCTGTTGAGCAGTTTCTGA

Protein sequence

MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF

Homology

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BLAST of Carg24568 vs. NCBI nr
Match: XP_022963887.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7011413.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 179
           AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF
Sbjct: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 178

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BLAST of Carg24568 vs. NCBI nr
Match: KAG6571687.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.2 bits (814), Expect = 4.6e-83
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALFA+AVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MATAKLFLALFAVAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 179
           AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF
Sbjct: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 178

[Close]

BLAST of Carg24568 vs. NCBI nr
Match: XP_022967631.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-81
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALFALAV SLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 179
           AG PAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVS+GSVIGAIGV LL SF
Sbjct: 121 AGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 178

[Close]

BLAST of Carg24568 vs. NCBI nr
Match: XP_023553599.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 7.4e-81
Identity = 173/178 (97.19%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALF+LAV SLDLS VSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 179
           A SPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAM+SVGSVIGAIGVALLSSF
Sbjct: 121 ASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF 178

[Close]

BLAST of Carg24568 vs. NCBI nr
Match: XP_038888277.1 (non-specific lipid transfer protein GPI-anchored 31 [Benincasa hispida])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 149/175 (85.14%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALFAL   ++  SAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKP+
Sbjct: 1   MATAKLFLALFALPFLAVHFSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCC+GLKTVLKADADCLC+AFKNSAQLGVVLNV+KALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GSCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVSKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALL 176
           AGSPA+ P  SPKS  A AP VN PTAAP PGKSAA+GA+VSVG+VI AIGVALL
Sbjct: 121 AGSPAVTPTASPKSTVAEAPVVNVPTAAPAPGKSAASGALVSVGAVIAAIGVALL 175

[Close]

BLAST of Carg24568 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.3e-31
Identity = 91/187 (48.66%), Postives = 121/187 (64.71%), Query Frame = 0


Query: 1   MATAKLFLA---LFALAVFSL-DLSAVSAAH---DAPAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + + SL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPAGSPAIAP---ANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAI 178
           C LS +P+ +P +AP   A  P++   +AP        P  G   ++    S  +V+ A+
Sbjct: 121 CGLSVAPSTAPGLAPGVAAAGPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAV 180

[Close]

BLAST of Carg24568 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0


Query: 33  AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVL 92
           AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV++   +CLC+AFKNS  LG+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 93  NVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAPANSPKSEA---AIAPAVNEPTAAP 152
           +++KA SLP+ CKV+AP ++ C LS S    PA AP  SP + A   A++   N  T   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAPGLSPTAGAGAPALSSGANAATPVS 143

Query: 153 GPGKSAATGAMVSVGSVIGAIGVALLSSF 179
            P  S A+   VS   V   I +AL+SSF
Sbjct: 144 SPRSSDASLLSVSFAFV---IFMALISSF 168

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BLAST of Carg24568 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.1e-16
Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 29  APAP---AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNS 88
           APAP   + DCS++I +M DCL ++   S  TKPE SCCTG++TVL+ +  C+C    ++
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 89  AQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAPANSPKSEAAIAPAVNEP 148
            ++G+ LN T+AL+ P ACK+S  A  +C +  S A +P  +P         ++P+   P
Sbjct: 98  GEMGIELNSTRALATPKACKLSI-APPHCGIITSGATTPGASP---------VSPSAGAP 157

Query: 149 TAAPGPGKSAATGA 160
           T +P   KS  T A
Sbjct: 158 TTSPSAAKSPETSA 161

[Close]

BLAST of Carg24568 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-16
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 30  PAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLG 89
           P+ + DCSS+I +M DCLSF++  ST   P  +CC G+KTVL     CLC A ++S ++G
Sbjct: 39  PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMG 98

Query: 90  VVLNVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAP 149
            VL+ TKAL++P  C V  P   NC +S   A +P             ++P V  PT +P
Sbjct: 99  FVLDDTKALAMPKICNV--PIDPNCDVSTPAASTP-------------VSPPVESPTTSP 150

Query: 150 GPGKSAA 157
              KS A
Sbjct: 159 SSAKSPA 150

[Close]

BLAST of Carg24568 vs. ExPASy Swiss-Prot
Match: Q6ASY2 (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 72/188 (38.30%), Postives = 96/188 (51.06%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSL----DLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60
           MA A    A+  L V  L     +   +A+  APAPAVDC++  L +ADCL +V+   T 
Sbjct: 1   MAVAARAAAVACLLVVGLAAVAGVDGATASSPAPAPAVDCTAEALKLADCLDYVTPGKTA 60

Query: 61  -TKPEGSCCTGLKTVLK--ADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            ++P   CC  +K  LK  A   CLC AF  S  L + +N+T+AL LPAAC   A A S 
Sbjct: 61  PSRPSKLCCGEVKGALKDSAAVGCLCAAF-TSKTLPLPINITRALHLPAACGADASAFSK 120

Query: 121 CKLSNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVI---GAI 179
           C    +PA SP++AP  S  S  A         AAP  G +AA   M S  +V+    A+
Sbjct: 121 CL---APAPSPSVAPGTSSGSGGA--------AAAPAKGAAAARSPMASTTAVLVVAAAV 176

[Close]

BLAST of Carg24568 vs. ExPASy TrEMBL
Match: A0A6J1HGE8 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111464062 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 179
           AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF
Sbjct: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 178

[Close]

BLAST of Carg24568 vs. ExPASy TrEMBL
Match: A0A6J1HSQ0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111467072 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MATAKLFLALFALAV SLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 179
           AG PAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVS+GSVIGAIGV LL SF
Sbjct: 121 AGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 178

[Close]

BLAST of Carg24568 vs. ExPASy TrEMBL
Match: A0A5A7SQU3 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002610 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.8e-64
Identity = 139/177 (78.53%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT  LFLA+F+L+  +L  S +SAA+DAPAPAVDCSSLILNMADCLSFVSNDSTTTKP+
Sbjct: 1   MATTNLFLAIFSLSFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSS 178
           A SPA+ P+ +PKS  A +P +NEPT AP PGKS ATGA+ SVGSV+ AIGVALL S
Sbjct: 121 ASSPAVTPSATPKSAEAASPVMNEPTGAPAPGKSGATGALASVGSVMAAIGVALLCS 177

[Close]

BLAST of Carg24568 vs. ExPASy TrEMBL
Match: A0A1S3C000 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucumis melo OX=3656 GN=LOC103495438 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.8e-64
Identity = 139/177 (78.53%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT  LFLA+F+L+  +L  S +SAA+DAPAPAVDCSSLILNMADCLSFVSNDSTTTKP+
Sbjct: 1   MATTNLFLAIFSLSFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSS 178
           A SPA+ P+ +PKS  A +P +NEPT AP PGKS ATGA+ SVGSV+ AIGVALL S
Sbjct: 121 ASSPAVTPSATPKSAEAASPVMNEPTGAPAPGKSGATGALASVGSVMAAIGVALLCS 177

[Close]

BLAST of Carg24568 vs. ExPASy TrEMBL
Match: A0A6J1CK38 (non-specific lipid-transfer protein-like protein At5g64080 OS=Momordica charantia OX=3673 GN=LOC111012165 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.0e-60
Identity = 138/183 (75.41%), Postives = 150/183 (81.97%), Query Frame = 0


Query: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MA  KL LAL ALAV +++ S V+ AHDAP PAVDCSSLILNMADCLSFVSNDSTTTKPE
Sbjct: 1   MAATKLSLALCALAVLAVNFSGVAPAHDAPPPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           GSCCTGLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAA+NCKLS SP
Sbjct: 61  GSCCTGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSTSP 120

Query: 121 AGSPAIAPANSPKSEAAIAPAV-----NEPTAAPGPGKSAATGAMVSVGSVIGAIGVALL 179
           AGSPA+ P +SP    A AP +     +EP  AP PGKSAA+   VSVGS+I AIG AL 
Sbjct: 121 AGSPALTPKSSPGPSTAAAPEIGAPTTSEPAPAPAPGKSAASAVFVSVGSLIAAIGAALF 180

[Close]

BLAST of Carg24568 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 5.2e-32
Identity = 91/187 (48.66%), Postives = 121/187 (64.71%), Query Frame = 0


Query: 1   MATAKLFLA---LFALAVFSL-DLSAVSAAH---DAPAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + + SL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPAGSPAIAP---ANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAI 178
           C LS +P+ +P +AP   A  P++   +AP        P  G   ++    S  +V+ A+
Sbjct: 121 CGLSVAPSTAPGLAPGVAAAGPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAV 180

[Close]

BLAST of Carg24568 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 90/184 (48.91%), Postives = 120/184 (65.22%), Query Frame = 0


Query: 1   MATAKLFLA---LFALAVFSL-DLSAVSAAH---DAPAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + + SL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVA 178
           C LS +P+ +P +A A  P++   +AP        P  G   ++    S  +V+ A+   
Sbjct: 121 CGLSVAPSTAPGVAAA-GPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAVLFV 176

[Close]

BLAST of Carg24568 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0


Query: 33  AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVL 92
           AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV++   +CLC+AFKNS  LG+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 93  NVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAPANSPKSEA---AIAPAVNEPTAAP 152
           +++KA SLP+ CKV+AP ++ C LS S    PA AP  SP + A   A++   N  T   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAPGLSPTAGAGAPALSSGANAATPVS 143

Query: 153 GPGKSAATGAMVSVGSVIGAIGVALLSSF 179
            P  S A+   VS   V   I +AL+SSF
Sbjct: 144 SPRSSDASLLSVSFAFV---IFMALISSF 168

[Close]

BLAST of Carg24568 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 33  AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVL 92
           AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV++   +CLC+AFKNS  LG+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 93  NVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAP 129
           +++KA SLP+ CKV+AP ++ C LS S    PA AP
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAP 118

[Close]

BLAST of Carg24568 vs. TAIR 10
Match: AT4G08670.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.6e-17
Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 29  APAP---AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNS 88
           APAP   + DCS++I +M DCL ++   S  TKPE SCCTG++TVL+ +  C+C    ++
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 89  AQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGSPAIAPANSPKSEAAIAPAVNEP 148
            ++G+ LN T+AL+ P ACK+S  A  +C +  S A +P  +P         ++P+   P
Sbjct: 98  GEMGIELNSTRALATPKACKLSI-APPHCGIITSGATTPGASP---------VSPSAGAP 157

Query: 149 TAAPGPGKSAATGA 160
           T +P   KS  T A
Sbjct: 158 TTSPSAAKSPETSA 161

The following BLAST results are available for this feature:

BLAST of Carg24568 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963887.1	2.1e-83	100.00	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] ...	[more]
KAG6571687.1	4.6e-83	99.44	Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022967631.1	5.7e-81	97.19	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima]	[more]
XP_023553599.1	7.4e-81	97.19	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp...	[more]
XP_038888277.1	1.6e-67	85.14	non-specific lipid transfer protein GPI-anchored 31 [Benincasa hispida]	[more]

BLAST of Carg24568 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI9	7.3e-31	48.66	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	1.9e-26	52.35	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	5.1e-16	38.81	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]
Q2PE60	6.6e-16	40.16	Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3...	[more]
Q6ASY2	2.0e-12	38.30	Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Carg24568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGE8	1.0e-83	100.00	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata...	[more]
A0A6J1HSQ0	2.7e-81	97.19	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima O...	[more]
A0A5A7SQU3	6.8e-64	78.53	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3C000	6.8e-64	78.53	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucumis melo OX=36...	[more]
A0A6J1CK38	2.0e-60	75.41	non-specific lipid-transfer protein-like protein At5g64080 OS=Momordica charanti...	[more]

BLAST of Carg24568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64080.1	5.2e-32	48.66	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.2	1.2e-31	48.91	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	1.3e-27	52.35	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	1.5e-26	62.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G08670.1	3.6e-17	38.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 58..72 score: 31.08 coord: 35..51 score: 22.53 coord: 91..108 score: 37.26
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..114 e-value: 2.5E-8 score: 43.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 22..114 e-value: 6.6E-15 score: 55.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 34..120 e-value: 1.9E-15 score: 58.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..116
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..176
None	No IPR available	PANTHER	PTHR33044:SF181	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 6..176
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 43..106 e-value: 1.37503E-13 score: 60.5183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24568-RA	Carg24568-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding