Carg24422 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24422
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WEB family protein At3g51220
Location	Carg_Chr04: 10823149 .. 10824262 (-)
RNA-Seq Expression	Carg24422
Synteny	Carg24422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAGTTCCCATATAAAGATGGAGCCATTACTTGATGTAGAAGGCAAGAAAGAGTATACATTTAAGCTACAGTGGAGATTGGACCTGCTGCTGTACCAGAAAATCAAATATTTGGAGATTCAACTACAACCAACCAAAAGCAGCTGCTTAATGAACTGCTAAATCCGTTGCAGCCATGGAGAGAGGTATGTCACTGACCCATGTTTGATTATGTGCTGACAATAATGCATGTTTAGCTTCATTCCTTTTCTTACTTTCATAGCTTCATATTATGTTATAACCTCCACCTCTCTATCTGTTGGCTGGTCATTTTCGACCACCATCTTCCCCACACAGCATGATGGTGATGTTTTTTTTTTGTCTTAACCTTGAAACAACAGCCATCCCCCCTTCTCTCTCTCTTTACGTTTAAAGCTAAAGCAAAGACCTCAATTCTCCCACCTAACCAATCATCAAATACACCATATCCTCCCACACCCTCTCCCCACACGTCCCATGGAAGACCCTGAAATGCCTAATCAAAGCTCTGCCTCCATTGTTGACACCTCCCGCCCCTTCCGCTCTGTCAAAGAAGCCGTTGCAGTGTTTGGCGAACGTCTTCTAGTCGGAGAAGCTTACTCGTCGTCGCCAAAGCCATGTCCCAATGCCCCATTGGCTGAAACAGGCACATGGGATTCTTTGTTAAGCTCCACAACAACACTAAAGGAAGAGAAAGAACATGAAGTGTTGGATACACTGAAGAAACTTGAGGCAGAGCTGGAGGAGACTAAGGAAGAGTTGAGGTTGTTGAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCTTCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCGGAAGCGGAGGCGGCGGCGGCGGCGAAAGCTGTGGCGACGAGAAGAATCACAATGGGATGTGAGAGTGGAAGGATAGAAGAAGAAATGAGGAGAACAGAGCCATTGGCTCAGATATTGAGATTTGGAGGGAAAAAGGAGAAGAAAAAGGTAAAGAAAAAGCCAATAATTCCACTGGTTGGAGATTTGTTGATGAGATTAAGGAGAAAAGGGAGTCTCACTTCTTCATTCAAATCCTTCGAT

mRNA sequence

TTGGAGTTCCCATATAAAGATGGAGCCATTACTTGATGTAGAAGGCAAGAAAGAGTATACATTTAAGCTACAGTGGAGATTGGACCTGCTGCTGTACCAGAAAATCAAATATTTGGAGATTCAACTACAACCAACCAAAAGCAGCTGCTTAATGAACTGCTAAATCCGTTGCAGCCATGGAGAGAGCTAAAGCAAAGACCTCAATTCTCCCACCTAACCAATCATCAAATACACCATATCCTCCCACACCCTCTCCCCACACGTCCCATGGAAGACCCTGAAATGCCTAATCAAAGCTCTGCCTCCATTGTTGACACCTCCCGCCCCTTCCGCTCTGTCAAAGAAGCCGTTGCAGTGTTTGGCGAACGTCTTCTAGTCGGAGAAGCTTACTCGTCGTCGCCAAAGCCATGTCCCAATGCCCCATTGGCTGAAACAGGCACATGGGATTCTTTGTTAAGCTCCACAACAACACTAAAGGAAGAGAAAGAACATGAAGTGTTGGATACACTGAAGAAACTTGAGGCAGAGCTGGAGGAGACTAAGGAAGAGTTGAGGTTGTTGAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCTTCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCGGAAGCGGAGGCGGCGGCGGCGGCGAAAGCTGTGGCGACGAGAAGAATCACAATGGGATGTGAGAGTGGAAGGATAGAAGAAGAAATGAGGAGAACAGAGCCATTGGCTCAGATATTGAGATTTGGAGGGAAAAAGGAGAAGAAAAAGGTAAAGAAAAAGCCAATAATTCCACTGGTTGGAGATTTGTTGATGAGATTAAGGAGAAAAGGGAGTCTCACTTCTTCATTCAAATCCTTCGAT

Coding sequence (CDS)

ATGGAAGACCCTGAAATGCCTAATCAAAGCTCTGCCTCCATTGTTGACACCTCCCGCCCCTTCCGCTCTGTCAAAGAAGCCGTTGCAGTGTTTGGCGAACGTCTTCTAGTCGGAGAAGCTTACTCGTCGTCGCCAAAGCCATGTCCCAATGCCCCATTGGCTGAAACAGGCACATGGGATTCTTTGTTAAGCTCCACAACAACACTAAAGGAAGAGAAAGAACATGAAGTGTTGGATACACTGAAGAAACTTGAGGCAGAGCTGGAGGAGACTAAGGAAGAGTTGAGGTTGTTGAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCTTCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCGGAAGCGGAGGCGGCGGCGGCGGCGAAAGCTGTGGCGACGAGAAGAATCACAATGGGATGTGAGAGTGGAAGGATAGAAGAAGAAATGAGGAGAACAGAGCCATTGGCTCAGATATTGAGATTTGGAGGGAAAAAGGAGAAGAAAAAGGTAAAGAAAAAGCCAATAATTCCACTGGTTGGAGATTTGTTGATGAGATTAAGGAGAAAAGGGAGTCTCACTTCTTCATTCAAATCCTTCGAT

Protein sequence

MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWDSLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKPIIPLVGDLLMRLRRKGSLTSSFKSFD

Homology

[Close]

BLAST of Carg24422 vs. NCBI nr
Match: KAG7032386.1 (WEB family protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.9 bits (969), Expect = 5.7e-101
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSLTSSFKSFD
Sbjct: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 206

[Close]

BLAST of Carg24422 vs. NCBI nr
Match: KAG6601626.1 (WEB family protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLV EAYSS PKPCPNAPLAETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVEEAYSSLPKPCPNAPLAETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSLTSSFKSFD
Sbjct: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 206

[Close]

BLAST of Carg24422 vs. NCBI nr
Match: XP_022957117.1 (WEB family protein At3g51220 [Cucurbita moschata])

HSP 1 Score: 368.6 bits (945), Expect = 3.5e-98
Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLV EAYSS PKPCPNAPLAETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVEEAYSSLPKPCPNAPLAETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           S LAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP
Sbjct: 121 SNLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSLTSSFKSF+
Sbjct: 181 IIPLVGDLLMRLRRKGSLTSSFKSFN 206

[Close]

BLAST of Carg24422 vs. NCBI nr
Match: XP_023544273.1 (WEB family protein At3g51220 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPC NAPLAETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCANAPLAETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEM+RTE L QILRFGGKKEKKKVKKKP
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMKRTEALTQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSL+SSFKSF+
Sbjct: 181 IIPLVGDLLMRLRRKGSLSSSFKSFN 206

[Close]

BLAST of Carg24422 vs. NCBI nr
Match: XP_022998394.1 (WEB family protein At3g51220 [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPC NAPL+ETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCANAPLSETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTT+KEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTVKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           SKLAEAEAEAAAAAKAVATRRITMGCE+GRIEEEM+RTE LAQILRFGGKKEKKKVKKKP
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCENGRIEEEMKRTEALAQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSL+SSFKSFD
Sbjct: 181 IIPLVGDLLMRLRRKGSLSSSFKSFD 206

[Close]

BLAST of Carg24422 vs. ExPASy Swiss-Prot
Match: F4I0N3 (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.0e-05
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAE-TGTWDSLLSSTTTLKEEK 74
           +DT+ PFR+VKEAVA+FGER+L  + YS+  K   +    + +G    L  +   LK  K
Sbjct: 10  IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVMHDEKWEDPSGIKIELQETRYDLKRAK 69

Query: 75  EH--EVLDTLKKLEAELEETKEELRLLK 100
           E   ++ ++L  L+ ELE TK+EL+ L+
Sbjct: 70  EESIQMRNSLSCLKEELERTKQELQKLR 97

[Close]

BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A6J1GY99 (WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLV EAYSS PKPCPNAPLAETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVEEAYSSLPKPCPNAPLAETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           S LAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP
Sbjct: 121 SNLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSLTSSFKSF+
Sbjct: 181 IIPLVGDLLMRLRRKGSLTSSFKSFN 206

[Close]

BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A6J1KE80 (WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPC NAPL+ETGTWD
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCANAPLSETGTWD 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SLLSSTTT+KEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTVKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKP 180
           SKLAEAEAEAAAAAKAVATRRITMGCE+GRIEEEM+RTE LAQILRFGGKKEKKKVKKKP
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCENGRIEEEMKRTEALAQILRFGGKKEKKKVKKKP 180

Query: 181 IIPLVGDLLMRLRRKGSLTSSFKSFD 207
           IIPLVGDLLMRLRRKGSL+SSFKSFD
Sbjct: 181 IIPLVGDLLMRLRRKGSLSSSFKSFD 206

[Close]

BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A1S3BDZ1 (LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC103488845 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71
Identity = 172/229 (75.11%), Postives = 187/229 (81.66%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPE+P+QSSAS VDTSRPFRSVKEAVAVFGERLLVG+AYSSSPKP  +APL E GTW+
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           ++ SSTTT+KEEKEH VLD+LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  AMPSSTTTIKEEKEH-VLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTE------------PLAQILR-- 180
           SKL  AEAEAAAAAKA ATRRI  GCE GRIEEEM+R+E             LAQIL   
Sbjct: 121 SKL--AEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFG 180

Query: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGS----LTSSFKSFD 207
                FGGKKEKKK K+KPIIPLVGDLL+ LR+KGS    L SSF SF+
Sbjct: 181 DKIGYFGGKKEKKK-KEKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 225

[Close]

BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A0A0KPW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 9.9e-67
Identity = 162/223 (72.65%), Postives = 179/223 (80.27%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPE+P+Q+SAS VDTSRPFRSVKEAVAVFGERLLVG+AYSSSPKP  +APL E GTW+
Sbjct: 1   MEDPEIPSQTSASAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           ++ SSTTT+KEEKEH VL +LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  AMPSSTTTIKEEKEH-VLVSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTE------------PLAQILR-- 180
           SKL  AEAEAAAA KA A RRI     SGRIEEEM+R+E             LAQIL   
Sbjct: 121 SKL--AEAEAAAAGKAAAARRIV---TSGRIEEEMKRSELKMRRMEETDSPTLAQILSFG 180

Query: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGSLTSSFKS 205
                FGGKKEKKK+KKKPIIPLVGDLL+ LR+KGS  +  +S
Sbjct: 181 DKIGYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSENDLRS 217

[Close]

BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A5A7SSG4 (NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002690 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.7e-66
Identity = 161/221 (72.85%), Postives = 178/221 (80.54%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWD 60
           MEDPE+P+QSSAS VDTSRPFRSVKEAVAVFGERLLVG+AYSSSPKP  +APL E GTW+
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           ++ SSTTT+KEEKEH VLD+LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  AMPSSTTTIKEEKEH-VLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTE------------PLAQILR-- 180
           SKL  AEAEAAAAAKA ATRRI  GCE GRIEEEM+R+E             LAQIL   
Sbjct: 121 SKL--AEAEAAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFG 180

Query: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGSLTSSF 203
                FGGKKEKKK+KKKPIIPL     ++ ++K SL + F
Sbjct: 181 DKIGYFGGKKEKKKIKKKPIIPL-RRRTVKNKKKQSLKTPF 217

[Close]

BLAST of Carg24422 vs. TAIR 10
Match: AT1G58070.1 (unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi - 19; Plants - 78; Viruses - 4; Other Eukaryotes - 68 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 9.3e-25
Identity = 101/266 (37.97%), Postives = 138/266 (51.88%), Query Frame = 0


Query: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVG------EAYSSSP--------- 60
           +E+ E  NQ     VDTSRPF SVKEAVA+FG+R+++        + S+SP         
Sbjct: 3   IEEMEGNNQVEEHHVDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRSINQ 62

Query: 61  --KP------------CPNA------------PLAETGTWDSLLSSTTTLKEEK------ 120
             KP             P A            P+A      +  SS++  K+        
Sbjct: 63  NAKPRSPGLSQTVKLVIPTASPSISQTAKLVSPIASPSISQTASSSSSPWKQRSLLPPSP 122

Query: 121 ---EHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAEA 180
              + E++D LKKLEAE+ ETK E+++LKERE +TEVALA+LNAELHKN SK+A+AEA+A
Sbjct: 123 QGPKEEIMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNKSKIAKAEADA 182

Query: 181 AAAAKAVATRRITM-------GCESGRIEEEMRRTE----PLAQIL--------RFGGKK 198
           A  + A  T+ ++          E  R +E MR+ +     LAQIL         +    
Sbjct: 183 AGKSAAAMTKSVSFKDTKEKENGEDQRRKELMRKMQKEYPSLAQILDSNKGNRDGYFANT 242

[Close]

BLAST of Carg24422 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 48.9 bits (115), Expect = 5.7e-06
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAE-TGTWDSLLSSTTTLKEEK 74
           +DT+ PFR+VKEAVA+FGER+L  + YS+  K   +    + +G    L  +   LK  K
Sbjct: 10  IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVMHDEKWEDPSGIKIELQETRYDLKRAK 69

Query: 75  EH--EVLDTLKKLEAELEETKEELRLLK 100
           E   ++ ++L  L+ ELE TK+EL+ L+
Sbjct: 70  EESIQMRNSLSCLKEELERTKQELQKLR 97

[Close]

BLAST of Carg24422 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAE------TGTWDSLLSSTTT 74
           +DT+ PFR+VKEAVA+FGER+L  + YS+  K      + +      +G    L  +   
Sbjct: 9   IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVAMKIQMHDEKWEDPSGIKIELQETRYD 68

Query: 75  LKEEKEH--EVLDTLKKLEAELEETKEELRLLK 100
           LK  KE   ++ ++L  L+ ELE TK+EL+ L+
Sbjct: 69  LKRAKEESIQMRNSLSCLKEELERTKQELQKLR 101

The following BLAST results are available for this feature:

BLAST of Carg24422 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032386.1	5.7e-101	100.00	WEB family protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601626.1	2.4e-99	99.03	WEB family protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022957117.1	3.5e-98	98.06	WEB family protein At3g51220 [Cucurbita moschata]	[more]
XP_023544273.1	2.9e-97	97.09	WEB family protein At3g51220 [Cucurbita pepo subsp. pepo]	[more]
XP_022998394.1	2.9e-97	96.60	WEB family protein At3g51220 [Cucurbita maxima]	[more]

BLAST of Carg24422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I0N3	8.0e-05	39.77	WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 S...	[more]

BLAST of Carg24422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY99	1.7e-98	98.06	WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 ...	[more]
A0A6J1KE80	1.4e-97	96.60	WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV...	[more]
A0A1S3BDZ1	1.7e-71	75.11	LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KPW0	9.9e-67	72.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1	[more]
A0A5A7SSG4	1.7e-66	72.85	NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G0...	[more]

BLAST of Carg24422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58070.1	9.3e-25	37.97	unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; B...	[more]
AT1G75720.2	5.7e-06	39.77	Plant protein of unknown function (DUF827)	[more]
AT1G75720.1	9.6e-06	37.63	Plant protein of unknown function (DUF827)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..129
None	No IPR available	PANTHER	PTHR32054	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	coord: 7..198
None	No IPR available	PANTHER	PTHR32054:SF11	EXPRESSED PROTEIN	coord: 7..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24422-RA	Carg24422-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009904	chloroplast accumulation movement
biological_process	GO:0009903	chloroplast avoidance movement
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding