Carg24422 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGGAGTTCCCATATAAAGATGGAGCCATTACTTGATGTAGAAGGCAAGAAAGAGTATACATTTAAGCTACAGTGGAGATTGGACCTGCTGCTGTACCAGAAAATCAAATATTTGGAGATTCAACTACAACCAACCAAAAGCAGCTGCTTAATGAACTGCTAAATCCGTTGCAGCCATGGAGAGAGGTATGTCACTGACCCATGTTTGATTATGTGCTGACAATAATGCATGTTTAGCTTCATTCCTTTTCTTACTTTCATAGCTTCATATTATGTTATAACCTCCACCTCTCTATCTGTTGGCTGGTCATTTTCGACCACCATCTTCCCCACACAGCATGATGGTGATGTTTTTTTTTTGTCTTAACCTTGAAACAACAGCCATCCCCCCTTCTCTCTCTCTTTACGTTTAAAGCTAAAGCAAAGACCTCAATTCTCCCACCTAACCAATCATCAAATACACCATATCCTCCCACACCCTCTCCCCACACGTCCCATGGAAGACCCTGAAATGCCTAATCAAAGCTCTGCCTCCATTGTTGACACCTCCCGCCCCTTCCGCTCTGTCAAAGAAGCCGTTGCAGTGTTTGGCGAACGTCTTCTAGTCGGAGAAGCTTACTCGTCGTCGCCAAAGCCATGTCCCAATGCCCCATTGGCTGAAACAGGCACATGGGATTCTTTGTTAAGCTCCACAACAACACTAAAGGAAGAGAAAGAACATGAAGTGTTGGATACACTGAAGAAACTTGAGGCAGAGCTGGAGGAGACTAAGGAAGAGTTGAGGTTGTTGAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCTTCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCGGAAGCGGAGGCGGCGGCGGCGGCGAAAGCTGTGGCGACGAGAAGAATCACAATGGGATGTGAGAGTGGAAGGATAGAAGAAGAAATGAGGAGAACAGAGCCATTGGCTCAGATATTGAGATTTGGAGGGAAAAAGGAGAAGAAAAAGGTAAAGAAAAAGCCAATAATTCCACTGGTTGGAGATTTGTTGATGAGATTAAGGAGAAAAGGGAGTCTCACTTCTTCATTCAAATCCTTCGAT TTGGAGTTCCCATATAAAGATGGAGCCATTACTTGATGTAGAAGGCAAGAAAGAGTATACATTTAAGCTACAGTGGAGATTGGACCTGCTGCTGTACCAGAAAATCAAATATTTGGAGATTCAACTACAACCAACCAAAAGCAGCTGCTTAATGAACTGCTAAATCCGTTGCAGCCATGGAGAGAGCTAAAGCAAAGACCTCAATTCTCCCACCTAACCAATCATCAAATACACCATATCCTCCCACACCCTCTCCCCACACGTCCCATGGAAGACCCTGAAATGCCTAATCAAAGCTCTGCCTCCATTGTTGACACCTCCCGCCCCTTCCGCTCTGTCAAAGAAGCCGTTGCAGTGTTTGGCGAACGTCTTCTAGTCGGAGAAGCTTACTCGTCGTCGCCAAAGCCATGTCCCAATGCCCCATTGGCTGAAACAGGCACATGGGATTCTTTGTTAAGCTCCACAACAACACTAAAGGAAGAGAAAGAACATGAAGTGTTGGATACACTGAAGAAACTTGAGGCAGAGCTGGAGGAGACTAAGGAAGAGTTGAGGTTGTTGAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCTTCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCGGAAGCGGAGGCGGCGGCGGCGGCGAAAGCTGTGGCGACGAGAAGAATCACAATGGGATGTGAGAGTGGAAGGATAGAAGAAGAAATGAGGAGAACAGAGCCATTGGCTCAGATATTGAGATTTGGAGGGAAAAAGGAGAAGAAAAAGGTAAAGAAAAAGCCAATAATTCCACTGGTTGGAGATTTGTTGATGAGATTAAGGAGAAAAGGGAGTCTCACTTCTTCATTCAAATCCTTCGAT ATGGAAGACCCTGAAATGCCTAATCAAAGCTCTGCCTCCATTGTTGACACCTCCCGCCCCTTCCGCTCTGTCAAAGAAGCCGTTGCAGTGTTTGGCGAACGTCTTCTAGTCGGAGAAGCTTACTCGTCGTCGCCAAAGCCATGTCCCAATGCCCCATTGGCTGAAACAGGCACATGGGATTCTTTGTTAAGCTCCACAACAACACTAAAGGAAGAGAAAGAACATGAAGTGTTGGATACACTGAAGAAACTTGAGGCAGAGCTGGAGGAGACTAAGGAAGAGTTGAGGTTGTTGAAGGAAAGGGAAGAAGATACAGAAGTGGCATTGGCTTCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCGGAAGCGGAGGCGGCGGCGGCGGCGAAAGCTGTGGCGACGAGAAGAATCACAATGGGATGTGAGAGTGGAAGGATAGAAGAAGAAATGAGGAGAACAGAGCCATTGGCTCAGATATTGAGATTTGGAGGGAAAAAGGAGAAGAAAAAGGTAAAGAAAAAGCCAATAATTCCACTGGTTGGAGATTTGTTGATGAGATTAAGGAGAAAAGGGAGTCTCACTTCTTCATTCAAATCCTTCGAT MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCPNAPLAETGTWDSLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTEPLAQILRFGGKKEKKKVKKKPIIPLVGDLLMRLRRKGSLTSSFKSFD Homology
BLAST of Carg24422 vs. NCBI nr
Match: KAG7032386.1 (WEB family protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377.9 bits (969), Expect = 5.7e-101 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Carg24422 vs. NCBI nr
Match: KAG6601626.1 (WEB family protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99 Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Carg24422 vs. NCBI nr
Match: XP_022957117.1 (WEB family protein At3g51220 [Cucurbita moschata]) HSP 1 Score: 368.6 bits (945), Expect = 3.5e-98 Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Carg24422 vs. NCBI nr
Match: XP_023544273.1 (WEB family protein At3g51220 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97 Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Carg24422 vs. NCBI nr
Match: XP_022998394.1 (WEB family protein At3g51220 [Cucurbita maxima]) HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97 Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Carg24422 vs. ExPASy Swiss-Prot
Match: F4I0N3 (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 8.0e-05 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A6J1GY99 (WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98 Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A6J1KE80 (WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97 Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0
BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A1S3BDZ1 (LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC103488845 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71 Identity = 172/229 (75.11%), Postives = 187/229 (81.66%), Query Frame = 0
BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A0A0KPW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 9.9e-67 Identity = 162/223 (72.65%), Postives = 179/223 (80.27%), Query Frame = 0
BLAST of Carg24422 vs. ExPASy TrEMBL
Match: A0A5A7SSG4 (NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002690 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.7e-66 Identity = 161/221 (72.85%), Postives = 178/221 (80.54%), Query Frame = 0
BLAST of Carg24422 vs. TAIR 10
Match: AT1G58070.1 (unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi - 19; Plants - 78; Viruses - 4; Other Eukaryotes - 68 (source: NCBI BLink). ) HSP 1 Score: 111.3 bits (277), Expect = 9.3e-25 Identity = 101/266 (37.97%), Postives = 138/266 (51.88%), Query Frame = 0
BLAST of Carg24422 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 48.9 bits (115), Expect = 5.7e-06 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Carg24422 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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