Carg23837 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23837
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Thioesterase domain containing protein
Location	Carg_Chr02: 4271251 .. 4272519 (+)
RNA-Seq Expression	Carg23837
Synteny	Carg23837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCCTCGAATCTTTCTGCGTCGGACGTCCAAACAAGAAACTGTCCATCCCGAAAATAAGGATCCACCGTCCATTGGGAGGCGCGTGCGATATCAATTGTTTTAATTGGTGGAGCACCAAACCCTCATGCTCCTGCGTCGCACTGGATAATTCAATGAATCTGACCTATTCTGATAGCTAAGATCGAAGACGAGAGGTGAAAAGGAAACCATGGAGAAGGCGAAGCAGCTTTTGGAATTGACTCCGGAGGAATCGGACGCCGTCGAGAAACTCGACGGCCGGCGGAATATTGCCGGAGATTCTTGCTTCTACACATTCTTTTCTTTCAGAGGCATCCTTGTCAATCGCGTCGAACCAGGACTCATCGTTTGTACTCTCAAGGTCCCCCCGCGCCTCACAGTAAGAACACTCGACTCTCTGTTAGACTGTTAGATCCTTCGCCGTTTATTTGCCCTAATTTTGGAGGTATTTCTGAATTCTGATGAAAACGCTGCGAAATCGATTGACGATCGGTTATTCTGCGAGCGAATCACTCGATGAAGAAAGAGGGAGGCTGATTTTTCAAATTAAGCACTCAAATCACTCGATCGAAATCGAAACCGAAATCAAATTACTCGATGGAAAAGTTTCTCGGAACGATTGAATTTGTATCGTATTGTTCAATCGAGTTCGAAATCTGTGGGGAGTGCTTTTATTTTCCTTAATTGCAACGCCTCTTGTCATCGATTTGTCGTTTCAGGATCGATCGGGGAAGCTGGCTTCAGGTGCGATCGCAAACCTAGTCGATGAAATTGGCAGCGCCGTAATCTACGATGAGCCCCCACCGACGCTGGTTTCTGTGGACATTTCGATCGCATACTTGTCGACCGCCGATGTCGATGTACGTATTATCCTCTCTTCTGCTACTCAGATTCACTTCACGAGCCCTAAAACAAACAAGCAAGAACAATGAAATCTAAACTGTTTGTGAAAATTGCAGGATGAATTGGAAATAACGTCGAGGCTGTTAGGGCAGAAAGAGCGTTACAATGGAGCCAGTGTGATTATTAAGAACAAAACGACTGGAGAAATTGTTGCAGAAGGAAGGCACTCGTTCTTCAGAATACGATCGAAAATGTGAGTGAAAGTAGAGAAATTCATTTGAACACTGATTTTCTGATCCACCATTCTTGGCAGACATAATCATATTCAAAATTTATATTGAGCATAGTTTGTTCATCACTACCAGTGCTAAATAACAATGTAACATAATAATTTTTTTTTT

mRNA sequence

ATGGGATTCCTCGAATCTTTCTGCGTCGGACGTCCAAACAAGAAACTGTCCATCCCGAAAATAAGGATCCACCGTCCATTGGGAGGCGCGTGCGATATCAATTGTTTTAATTGGTGGAGCACCAAACCCTCATGCTCCTGCGTCGCACTGGATAATTCAATGAATCTGACCTATTCTGATAGCTAAGATCGAAGACGAGAGGTGAAAAGGAAACCATGGAGAAGGCGAAGCAGCTTTTGGAATTGACTCCGGAGGAATCGGACGCCGTCGAGAAACTCGACGGCCGGCGGAATATTGCCGGAGATTCTTGCTTCTACACATTCTTTTCTTTCAGAGGCATCCTTGTCAATCGCGTCGAACCAGGACTCATCGTTTGTACTCTCAAGGTCCCCCCGCGCCTCACAGATCGATCGGGGAAGCTGGCTTCAGGTGCGATCGCAAACCTAGTCGATGAAATTGGCAGCGCCGTAATCTACGATGAGCCCCCACCGACGCTGGTTTCTGTGGACATTTCGATCGCATACTTGTCGACCGCCGATGTCGATGATGAATTGGAAATAACGTCGAGGCTGTTAGGGCAGAAAGAGCGTTACAATGGAGCCAGTGTGATTATTAAGAACAAAACGACTGGAGAAATTGTTGCAGAAGGAAGGCACTCGTTCTTCAGAATACGATCGAAAATGTGAGTGAAAGTAGAGAAATTCATTTGAACACTGATTTTCTGATCCACCATTCTTGGCAGACATAATCATATTCAAAATTTATATTGAGCATAGTTTGTTCATCACTACCAGTGCTAAATAACAATGTAACATAATAATTTTTTTTTT

Coding sequence (CDS)

ATGGAGAAGGCGAAGCAGCTTTTGGAATTGACTCCGGAGGAATCGGACGCCGTCGAGAAACTCGACGGCCGGCGGAATATTGCCGGAGATTCTTGCTTCTACACATTCTTTTCTTTCAGAGGCATCCTTGTCAATCGCGTCGAACCAGGACTCATCGTTTGTACTCTCAAGGTCCCCCCGCGCCTCACAGATCGATCGGGGAAGCTGGCTTCAGGTGCGATCGCAAACCTAGTCGATGAAATTGGCAGCGCCGTAATCTACGATGAGCCCCCACCGACGCTGGTTTCTGTGGACATTTCGATCGCATACTTGTCGACCGCCGATGTCGATGATGAATTGGAAATAACGTCGAGGCTGTTAGGGCAGAAAGAGCGTTACAATGGAGCCAGTGTGATTATTAAGAACAAAACGACTGGAGAAATTGTTGCAGAAGGAAGGCACTCGTTCTTCAGAATACGATCGAAAATGTGA

Protein sequence

MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPPRLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLLGQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM

Homology

[Close]

BLAST of Carg23837 vs. NCBI nr
Match: KAG6605429.1 (Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035378.1 Acyl-coenzyme A thioesterase 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 2.7e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP
Sbjct: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 157
           GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM
Sbjct: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 156

[Close]

BLAST of Carg23837 vs. NCBI nr
Match: XP_022948156.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita moschata])

HSP 1 Score: 298.9 bits (764), Expect = 2.6e-77
Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEKAKQLLELTPEESDAVEKLDGR NIAGDSCFYTFFSFRGI VNRVEPGLIVCTLKVPP
Sbjct: 1   MEKAKQLLELTPEESDAVEKLDGRPNIAGDSCFYTFFSFRGIRVNRVEPGLIVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAY STADVDDELEITSRLL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYFSTADVDDELEITSRLL 120

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 157
           GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM
Sbjct: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 156

[Close]

BLAST of Carg23837 vs. NCBI nr
Match: XP_023532314.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEKAKQLLELTPEE+DAVEKLDGRRNIAGDSCFYTFFSFRGI VNRVEPGLIVCTLKVPP
Sbjct: 1   MEKAKQLLELTPEEADAVEKLDGRRNIAGDSCFYTFFSFRGIRVNRVEPGLIVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKLASGAIANLVDEIGS VIYDEPPPTLVSVDISIAYLSTA+VDDELEITSRLL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGSTVIYDEPPPTLVSVDISIAYLSTANVDDELEITSRLL 120

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 157
           GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM
Sbjct: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 156

[Close]

BLAST of Carg23837 vs. NCBI nr
Match: KAG6570673.1 (Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEK KQLLEL+ EE++AVEKLD R   AG+SCFYTFF+ RGI V+R EPGL+VCTLKVPP
Sbjct: 1   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKL+SGAIANLVDE+G AVIYDE  P  VSVD+SI+Y+STADVDDELEI SRLL
Sbjct: 61  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 120

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIR 154
           GQK RY+G SV+IKNK TGEIVAEGRHS F IR
Sbjct: 121 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIR 153

[Close]

BLAST of Carg23837 vs. NCBI nr
Match: XP_022943771.1 (uncharacterized protein LOC111448424 [Cucurbita moschata] >KAG7010519.1 Acyl-coenzyme A thioesterase 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEK KQLLEL+ EE++AVEKLD R   AG+SCFYTFF+ RGI V+R EPGL+VCTLKVPP
Sbjct: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKL+SGAIANLVDE+G AVIYDE  P  VSVD+SI+Y+STADVDDELEI SRLL
Sbjct: 69  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 128

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIR 154
           GQK RY+G SV+IKNK TGEIVAEGRHS F IR
Sbjct: 129 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIR 161

[Close]

BLAST of Carg23837 vs. ExPASy Swiss-Prot
Match: Q9CQR4 (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-12
Identity = 40/101 (39.60%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 49  PGLIVCTLKVPPRLTDRSGKLASGAIANLVDEIGS-AVIYDEPPPTLVSVDISIAYLSTA 108
           P  ++C +KV  + T++ G L  G  A LVD I + A++  E     VSVD++I Y+S A
Sbjct: 35  PEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSVDMNITYMSPA 94

Query: 109 DVDDELEITSRLLGQKERYNGASVIIKNKTTGEIVAEGRHS 149
            + +E+ IT+ +L Q +    ASV + NKTTG+++A+GRH+
Sbjct: 95  KIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135

[Close]

BLAST of Carg23837 vs. ExPASy Swiss-Prot
Match: Q9NPJ3 (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 49  PGLIVCTLKVPPRLTDRSGKLASGAIANLVDEIGS-AVIYDEPPPTLVSVDISIAYLSTA 108
           PG ++C +KV    T+  G L  G  A LVD I + A++  E     VSVD++I Y+S A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 109 DVDDELEITSRLLGQKERYNGASVIIKNKTTGEIVAEGRHS 149
            + +++ IT+ +L Q +     SV + NK TG+++A+GRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Carg23837 vs. ExPASy Swiss-Prot
Match: Q5R833 (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 49  PGLIVCTLKVPPRLTDRSGKLASGAIANLVDEIGS-AVIYDEPPPTLVSVDISIAYLSTA 108
           PG ++C +KV    T+  G L  G  A LVD I + A++  E     VSVD++I Y+S A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 109 DVDDELEITSRLLGQKERYNGASVIIKNKTTGEIVAEGRHS 149
            + +++ IT+ +L Q +     SV + NK TG+++A+GRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Carg23837 vs. ExPASy TrEMBL
Match: A0A6J1G8H0 (acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111451820 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEKAKQLLELTPEESDAVEKLDGR NIAGDSCFYTFFSFRGI VNRVEPGLIVCTLKVPP
Sbjct: 1   MEKAKQLLELTPEESDAVEKLDGRPNIAGDSCFYTFFSFRGIRVNRVEPGLIVCTLKVPP 60

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAY STADVDDELEITSRLL
Sbjct: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYFSTADVDDELEITSRLL 120

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 157
           GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM
Sbjct: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIRSKM 156

[Close]

BLAST of Carg23837 vs. ExPASy TrEMBL
Match: A0A6J1FSM4 (uncharacterized protein LOC111448424 OS=Cucurbita moschata OX=3662 GN=LOC111448424 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.4e-58
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEK KQLLEL+ EE++AVEKLD R   AG+SCFYTFF+ RGI V+R EPGL+VCTLKVPP
Sbjct: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKL+SGAIANLVDE+G AVIYDE  P  VSVD+SI+Y+STADVDDELEI SRLL
Sbjct: 69  RLTDRSGKLSSGAIANLVDEVGCAVIYDEALPEPVSVDMSISYMSTADVDDELEIVSRLL 128

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIR 154
           GQK RY+G SV+IKNK TGEIVAEGRHS F IR
Sbjct: 129 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIR 161

[Close]

BLAST of Carg23837 vs. ExPASy TrEMBL
Match: A0A6J1JFG8 (uncharacterized protein LOC111484536 OS=Cucurbita maxima OX=3661 GN=LOC111484536 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.4e-57
Identity = 116/153 (75.82%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEK KQLLEL+ EE++AVEKLD R   AG+SCFYTFF+ RGI V+R EPGL+VCTLKVPP
Sbjct: 9   MEKTKQLLELSQEEANAVEKLDVRPRKAGESCFYTFFALRGIRVDRSEPGLVVCTLKVPP 68

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDR+GKL+SGAIANLVDE+G A+IYDE  P  VS+D+SI+Y+STADVDDELEI SRLL
Sbjct: 69  RLTDRTGKLSSGAIANLVDEVGCAIIYDEALPEPVSIDMSISYMSTADVDDELEIVSRLL 128

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIR 154
           GQK RY+G SV+IKNK TGEIVAEGRHS F IR
Sbjct: 129 GQKGRYSGTSVVIKNKGTGEIVAEGRHSLFSIR 161

[Close]

BLAST of Carg23837 vs. ExPASy TrEMBL
Match: A0A5A7V7K8 (Putative acyl-CoA thioesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00440 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.2e-57
Identity = 118/153 (77.12%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEKAKQLLELT EE+DAV+KL  R    G SCFYTFF+ RGI V+RVEPGL+VCTLKVPP
Sbjct: 35  MEKAKQLLELTKEETDAVQKLPVRPKKPGQSCFYTFFALRGIQVDRVEPGLVVCTLKVPP 94

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKLASGAIANLVDEIG AVIYDE  P  VSVD+SI+Y+S+ADVDDELEI S+LL
Sbjct: 95  RLTDRSGKLASGAIANLVDEIGCAVIYDEALPEPVSVDMSISYMSSADVDDELEIVSKLL 154

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIR 154
           GQK RY+G  V+IKNK  GEIVAEGRHS F IR
Sbjct: 155 GQKGRYSGTRVVIKNKRNGEIVAEGRHSLFSIR 187

[Close]

BLAST of Carg23837 vs. ExPASy TrEMBL
Match: A0A1S3CM40 (uncharacterized protein LOC103502041 OS=Cucumis melo OX=3656 GN=LOC103502041 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.2e-57
Identity = 118/153 (77.12%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEKAKQLLELT EE+DAV+KL  R    G SCFYTFF+ RGI V+RVEPGL+VCTLKVPP
Sbjct: 35  MEKAKQLLELTKEETDAVQKLPVRPKKPGQSCFYTFFALRGIQVDRVEPGLVVCTLKVPP 94

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDRSGKLASGAIANLVDEIG AVIYDE  P  VSVD+SI+Y+S+ADVDDELEI S+LL
Sbjct: 95  RLTDRSGKLASGAIANLVDEIGCAVIYDEALPEPVSVDMSISYMSSADVDDELEIVSKLL 154

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFFRIR 154
           GQK RY+G  V+IKNK  GEIVAEGRHS F IR
Sbjct: 155 GQKGRYSGTRVVIKNKRNGEIVAEGRHSLFSIR 187

[Close]

BLAST of Carg23837 vs. TAIR 10
Match: AT2G29590.1 (Thioesterase superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-38
Identity = 83/150 (55.33%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 1   MEKAKQLLELTPEESDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLKVPP 60
           MEK  + L+L+ E  D  E       +     FY  FS RGI VNRVEPG I C+ KVP 
Sbjct: 2   MEKIMEYLQLSDEVVDDGEAPRVEEFLGEGKSFYENFSLRGIRVNRVEPGFISCSFKVPL 61

Query: 61  RLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDISIAYLSTADVDDELEITSRLL 120
           RLTDR   LA+GAIANLVDE+G A+++ E  P  VSVD+SIA+LS A + +ELEITSRLL
Sbjct: 62  RLTDRDKNLANGAIANLVDEVGGALVHGEGLPMSVSVDMSIAFLSKAKLGEELEITSRLL 121

Query: 121 GQKERYNGASVIIKNKTTGEIVAEGRHSFF 151
           G++  Y G  V+++NK TGEI+AEGRHS F
Sbjct: 122 GERGGYKGTIVVVRNKMTGEIIAEGRHSMF 151

[Close]

BLAST of Carg23837 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-20
Identity = 64/161 (39.75%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 1   MEKAKQLLELTPEE---SDAVEKLDGRRNIAGDSCFYTFFSFRGILVNRVEPGLIVCTLK 60
           +E  K+ LE   +E      V KL  R        F   F   G+ V+ +EPG IVC++K
Sbjct: 3   LESVKKYLEGDEDEKAKEPMVAKLPHR--------FLERFVTNGLKVDLIEPGRIVCSMK 62

Query: 61  VPPRLTDRSGKLASGAIANLVDEIGSAVIYDE-PPPTLVSVDISIAYLSTADVDDELEIT 120
           +PP L +    L  GA A LVD IGSAVIY      + VSV+I+++YL  A +D+E+EI 
Sbjct: 63  IPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSVEINVSYLDAAFLDEEIEIE 122

Query: 121 SRLLGQKERYNGASVIIKNKTTGEIVAEGRHS-FFRIRSKM 157
           S+ L   +     SV ++ KTTG+I+A+GRH+ +F  RS +
Sbjct: 123 SKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of Carg23837 vs. TAIR 10
Match: AT3G16175.1 (Thioesterase superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 32/107 (29.91%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 40  RGILVNRVEPGLIVCTLKVPPRLTDRSGKLASGAIANLVDEIGSAVIYDEPPPTLVSVDI 99
           +G+ +  V  G++ C L V   +    G   +G I  ++D IG++ +Y       +SVD+
Sbjct: 31  KGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDSIGASAVYSSGGGLHISVDL 90

Query: 100 SIAYLSTADVDDELEITSRLLGQKERYNGASVIIKNKTTGEIVAEGR 147
           + ++ STA + + +EI +R+ G       A + I+ +T+GEI+A GR
Sbjct: 91  NSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSGEIIATGR 137

The following BLAST results are available for this feature:

BLAST of Carg23837 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605429.1	2.7e-79	100.00	Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022948156.1	2.6e-77	98.08	acyl-coenzyme A thioesterase 13-like [Cucurbita moschata]	[more]
XP_023532314.1	3.3e-77	97.44	acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo]	[more]
KAG6570673.1	1.3e-57	77.78	Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943771.1	1.3e-57	77.78	uncharacterized protein LOC111448424 [Cucurbita moschata] >KAG7010519.1 Acyl-coe...	[more]

BLAST of Carg23837 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQR4	3.9e-12	39.60	Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1	[more]
Q9NPJ3	4.3e-11	37.62	Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1	[more]
Q5R833	4.3e-11	37.62	Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1	[more]

BLAST of Carg23837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8H0	1.2e-77	98.08	acyl-coenzyme A thioesterase 13-like OS=Cucurbita moschata OX=3662 GN=LOC1114518...	[more]
A0A6J1FSM4	6.4e-58	77.78	uncharacterized protein LOC111448424 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JFG8	2.4e-57	75.82	uncharacterized protein LOC111484536 OS=Cucurbita maxima OX=3661 GN=LOC111484536...	[more]
A0A5A7V7K8	9.2e-57	77.12	Putative acyl-CoA thioesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CM40	9.2e-57	77.12	uncharacterized protein LOC103502041 OS=Cucumis melo OX=3656 GN=LOC103502041 PE=...	[more]

BLAST of Carg23837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29590.1	1.9e-38	55.33	Thioesterase superfamily protein	[more]
AT1G04290.1	8.9e-20	39.75	Thioesterase superfamily protein	[more]
AT3G16175.1	1.3e-10	29.91	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 72..125 e-value: 1.2E-4 score: 22.3
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 24..154 e-value: 2.7E-24 score: 87.7
None	No IPR available	PANTHER	PTHR21660:SF8	OS02G0521700 PROTEIN	coord: 2..156
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 41..151 e-value: 4.71276E-15 score: 64.8866
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 2..156
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 31..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23837-RA	Carg23837-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0047617	acyl-CoA hydrolase activity