Carg22674 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22674
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr12: 8713071 .. 8715940 (+)
RNA-Seq Expression	Carg22674
Synteny	Carg22674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGAACTCTCTTGTTGCAGCGGTAGCAAATCCACACTGCTTTCCGACAAATTTGAAACAGAAACGCCCAATTTTGTTCCAGCAGAGACGCCCCGCAGGTCGAGCGTCGGCTCGTAAGGTACGCCTCAATCACTGAAGTAATTTAGCAGTTTGAATTCAGATTCTGATGATTAATTTTCAGTTTCTTCCGCTTTTATCGTCATTTGTTGGTTTGTGGTTAGATTAAATTTGGGCGGAAATGGAAAATTGTGATAAATGCGCGGATGTTCTATTATCAGGTTATCCAGAACTCGAATGAGAATATTGTGTGTATGAACTGCTGTGATGATTGATTGTTAATGTAGATTAAGCCTAAGTTCTGAAGAATCGGTTCTGAATGTGTTGTCTTGAAACTTGGAGATGATTAATTGTATGAACTGTTAAGTAGTCTGATCGGGGACTTTGATGTTACTAGGGATTGTTCTTGTAAATAAAATTGAAGCAAAAGGTCCTCTTTGAAGTGGCTTGCTCATGATATGATGAGGGTCTGAGGGTGTGTGTGGATGCCAGGTTAAATCTCCTTTAGGACCATGTTAGGCTAGTGGCTTAGACGTTCGTTCCAATGTTGAGTTATTCTTGATATGTTGAGTTAGAGTAAATCTAATCCTTTGATTTATTCTTGACGTTTCAAGATTGATGATAACTCTCTGCAAGAACTTAGCAGGGCATAGTTTAGGCATTATCAATACTTAAAATTAAAATCACGTTCTTTCATTTTTAATTAAGATTTAGATCAGTTTGGGTTTGGTTTTTGATCATGTCTAGAGGTAAGAGCCCTAGCCCTTGGAAAGACCTCACTAATTGGCTTTCGTTGTTATCTGATAATTATTTGAAGTTGGGGATCGGTCAAGTCACTGATCTTTTTCTGGAAGAACAATGTGTGGGGACTGTGCCCCTTGTGGAGTTTGTCTAGGATGTACTTGTTGATATTACTCTTCACTGACCTATGGCTGTGGCTATGGCTGTGGCTATGGCTATAGCTATGGCTTTTACTGGGAAAGCTGTTGCATGAAATACATTATTAAGGAGAGATGAGATTTATGCAATTGCTGGCCAGTATGGTCCTCTTTGAGCTTTCCCTTGAGGTTTTTAAAACTCGTCTGCTAGGGAGAGGTTTCCACACTCATATAAAGAATGTTTTGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCATTCCCTTCGGGGTCCAGTGCCCTTCCTGGTACACCGCCTCGTGTCCACCCCCTTTCGGGACTCAGTCTCCTCGCTAGCACGTCGTTCGGTGTCTGGCTCTGATATCATTTGGAACGGCCCAAGCCCAATACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGTTTCTCCTCAAGTTTTTTAAAACTCGTCTGCTAGGGAGAGGTTTCCACACTCTTATAAAGACATGGGATCTCACAATTTATGAGTGGACAGATAACGCATTCGATTCAAGGAAAATACTCTGAGATGAAGGCATATTAACAAAAGGACTTACATATCACAATTATTTCTTGGGGAAATCCGTACAGCTAATGGTTCTCTGTACAATTTAGATCCTTAAAGTAACAAAACAGAAATAGAGTGATTTATTTACTGATGAACATGTTATAGATATTTTTCACTTCCCTAATTTTGTTTATTTTATACGCAATGTACTTAGGATAGATACTCCGGCAGAACAAAGAAAAAGGAAGCTTTGCTGGCGATGATTTTTCTATCAACCATTCCCAAGTGATTGAGAAATTGAGCCAAAGAAGAACGCCTGTTTTAGCTCAAGAGATTTTCTTGGAGCTGAAATCTGAAGATTTTCCATTAAACAACTCGACGTTGTCTTCTCTTATGGTACGGTACATAGATGGCGGTCTTCTCCTCCAAGCAGAAGCAATTTGGGAAGAAATGTTAAACAGTTGTTTCGTGCCTTCCGTTTTAGTAATTTCAAAGTTACTTAACACGTACGGAAAGATGAGACGCTTCGACGATATAATTAAAGTTCTGGATCAGGTAAAGCTAAGGTATTTACACTTACTGCCTGAAGCATACTCATTAGCCATATCATGTTTTGGGAAGCATGGTCAATTAGAATTGATGGAAAACACTTTGAGGGAAATGGTTTCCAGTGGTGTTCCAGTTGATTCCCGTACAGGAAATTCCTTTATTGTATACTACAGCATTTTTGGTTCTCTGATGGAGATGGAAACCGCCTATGGCCGCCTTAAAAGGTCTCGGTTTCTAATTGAGAAGGAAGGCATCCTAGCAATGGCGTTCGCCTACATAAGGGAAAGAAAATTTTACAGATTAGGGGAATTCCTTAGGGATGTTGGTCTTAGAAGGAAAAACGTGGGGAATCTGTTATGGAATCTTCTACTTTTATCTTATGCTGCCAATTTCAAAATGAAAAGCTTGCAGCGTGAGTTTCTGGCAATGGTTGAAGCTGGATTTAATCCGGATATTACAACGTTTAATATTAGAGCTATGGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGAAACACGTGAAGATCGAACCCGATCTCGTGACGTACGGTTGTGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGGAATTTGGAATTCGTTTTGAGCAAAATGAATCCAGATCAACCTCCAATATCATTAACAGATCCGTTTGTTTTTGAGGCATTGGGTAAAGGAGATTTCCACATGAGCTCTGAGGCGTTCATGCAGTTCCAGAAGCAGAAGAAATGGACTTACAGAGAGTTGATATCATTGTATCTGAAAAAGCAACACAGGAGAGATCAAGTCTTTTGGAATTACTAG

mRNA sequence

ATGGAATTGAACTCTCTTGTTGCAGCGGTAGCAAATCCACACTGCTTTCCGACAAATTTGAAACAGAAACGCCCAATTTTGTTCCAGCAGAGACGCCCCGCAGGTCGAGCGTCGGCTCGTAAGATACTCCGGCAGAACAAAGAAAAAGGAAGCTTTGCTGGCGATGATTTTTCTATCAACCATTCCCAAGTGATTGAGAAATTGAGCCAAAGAAGAACGCCTGTTTTAGCTCAAGAGATTTTCTTGGAGCTGAAATCTGAAGATTTTCCATTAAACAACTCGACGTTGTCTTCTCTTATGGTACGGTACATAGATGGCGGTCTTCTCCTCCAAGCAGAAGCAATTTGGGAAGAAATGTTAAACAGTTGTTTCGTGCCTTCCGTTTTAGTAATTTCAAAGTTACTTAACACGTACGGAAAGATGAGACGCTTCGACGATATAATTAAAGTTCTGGATCAGGTAAAGCTAAGGTATTTACACTTACTGCCTGAAGCATACTCATTAGCCATATCATGTTTTGGGAAGCATGGTCAATTAGAATTGATGGAAAACACTTTGAGGGAAATGGTTTCCAGTGGTGTTCCAGTTGATTCCCGTACAGGAAATTCCTTTATTGTATACTACAGCATTTTTGGTTCTCTGATGGAGATGGAAACCGCCTATGGCCGCCTTAAAAGGTCTCGGTTTCTAATTGAGAAGGAAGGCATCCTAGCAATGGCGTTCGCCTACATAAGGGAAAGAAAATTTTACAGATTAGGGGAATTCCTTAGGGATGTTGGTCTTAGAAGGAAAAACGTGGGGAATCTGTTATGGAATCTTCTACTTTTATCTTATGCTGCCAATTTCAAAATGAAAAGCTTGCAGCGTGAGTTTCTGGCAATGGTTGAAGCTGGATTTAATCCGGATATTACAACGTTTAATATTAGAGCTATGGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGAAACACGTGAAGATCGAACCCGATCTCGTGACGTACGGTTGTGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGGAATTTGGAATTCGTTTTGAGCAAAATGAATCCAGATCAACCTCCAATATCATTAACAGATCCGTTTGTTTTTGAGGCATTGGGTAAAGGAGATTTCCACATGAGCTCTGAGGCGTTCATGCAGTTCCAGAAGCAGAAGAAATGGACTTACAGAGAGTTGATATCATTGTATCTGAAAAAGCAACACAGGAGAGATCAAGTCTTTTGGAATTACTAG

Coding sequence (CDS)

ATGGAATTGAACTCTCTTGTTGCAGCGGTAGCAAATCCACACTGCTTTCCGACAAATTTGAAACAGAAACGCCCAATTTTGTTCCAGCAGAGACGCCCCGCAGGTCGAGCGTCGGCTCGTAAGATACTCCGGCAGAACAAAGAAAAAGGAAGCTTTGCTGGCGATGATTTTTCTATCAACCATTCCCAAGTGATTGAGAAATTGAGCCAAAGAAGAACGCCTGTTTTAGCTCAAGAGATTTTCTTGGAGCTGAAATCTGAAGATTTTCCATTAAACAACTCGACGTTGTCTTCTCTTATGGTACGGTACATAGATGGCGGTCTTCTCCTCCAAGCAGAAGCAATTTGGGAAGAAATGTTAAACAGTTGTTTCGTGCCTTCCGTTTTAGTAATTTCAAAGTTACTTAACACGTACGGAAAGATGAGACGCTTCGACGATATAATTAAAGTTCTGGATCAGGTAAAGCTAAGGTATTTACACTTACTGCCTGAAGCATACTCATTAGCCATATCATGTTTTGGGAAGCATGGTCAATTAGAATTGATGGAAAACACTTTGAGGGAAATGGTTTCCAGTGGTGTTCCAGTTGATTCCCGTACAGGAAATTCCTTTATTGTATACTACAGCATTTTTGGTTCTCTGATGGAGATGGAAACCGCCTATGGCCGCCTTAAAAGGTCTCGGTTTCTAATTGAGAAGGAAGGCATCCTAGCAATGGCGTTCGCCTACATAAGGGAAAGAAAATTTTACAGATTAGGGGAATTCCTTAGGGATGTTGGTCTTAGAAGGAAAAACGTGGGGAATCTGTTATGGAATCTTCTACTTTTATCTTATGCTGCCAATTTCAAAATGAAAAGCTTGCAGCGTGAGTTTCTGGCAATGGTTGAAGCTGGATTTAATCCGGATATTACAACGTTTAATATTAGAGCTATGGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGAAACACGTGAAGATCGAACCCGATCTCGTGACGTACGGTTGTGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGGAATTTGGAATTCGTTTTGAGCAAAATGAATCCAGATCAACCTCCAATATCATTAACAGATCCGTTTGTTTTTGAGGCATTGGGTAAAGGAGATTTCCACATGAGCTCTGAGGCGTTCATGCAGTTCCAGAAGCAGAAGAAATGGACTTACAGAGAGTTGATATCATTGTATCTGAAAAAGCAACACAGGAGAGATCAAGTCTTTTGGAATTACTAG

Protein sequence

MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRDQVFWNY

Homology

[Close]

BLAST of Carg22674 vs. NCBI nr
Match: KAG7020945.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 846.7 bits (2186), Expect = 9.0e-242
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN
Sbjct: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV
Sbjct: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 426

[Close]

BLAST of Carg22674 vs. NCBI nr
Match: XP_022937749.1 (pentatricopeptide repeat-containing protein At3g42630 [Cucurbita moschata])

HSP 1 Score: 841.3 bits (2172), Expect = 3.8e-240
Identity = 423/426 (99.30%), Postives = 424/426 (99.53%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDD SIN
Sbjct: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDSSIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPVDSRTGNSFI YYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 181 LMENTLREMVSSGVPVDSRTGNSFIAYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGN+LWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNMLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV
Sbjct: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 426

[Close]

BLAST of Carg22674 vs. NCBI nr
Match: XP_023536679.1 (pentatricopeptide repeat-containing protein At3g42630 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 838.2 bits (2164), Expect = 3.2e-239
Identity = 420/426 (98.59%), Postives = 425/426 (99.77%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN
Sbjct: 2   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 61

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELK E+FPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 62  HSQVIEKLSQRRTPVLAQEIFLELKPEEFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 121

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVK+RYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 122 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKIRYLHLLPEAYSLAISCFGKHGQLE 181

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 182 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 241

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 242 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 301

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRA+AFSRMDLLWDLHLSLEHMKH+KIEPDLV+YGCVVDAYVDRRLGRNLEFV
Sbjct: 302 PDITTFNIRAVAFSRMDLLWDLHLSLEHMKHMKIEPDLVSYGCVVDAYVDRRLGRNLEFV 361

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 362 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 421

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 422 QVFWNY 427

[Close]

BLAST of Carg22674 vs. NCBI nr
Match: KAG6586124.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 837.0 bits (2161), Expect = 7.1e-239
Identity = 422/426 (99.06%), Postives = 422/426 (99.06%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKE GSFAGDD SIN
Sbjct: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKENGSFAGDDSSIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPVDS TGNSFI YYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 181 LMENTLREMVSSGVPVDSCTGNSFIAYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV
Sbjct: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 426

[Close]

BLAST of Carg22674 vs. NCBI nr
Match: XP_022966074.1 (pentatricopeptide repeat-containing protein At3g42630 [Cucurbita maxima])

HSP 1 Score: 821.2 bits (2120), Expect = 4.0e-234
Identity = 416/426 (97.65%), Postives = 417/426 (97.89%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKR  LFQ RRPAGRASARKILRQNKEKGSFA DD SIN
Sbjct: 1   MELNSLVAAVANPHCFPTNLKQKRSFLFQHRRPAGRASARKILRQNKEKGSFADDDSSIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPV SRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 181 LMENTLREMVSSGVPVGSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYV+RRLGRNLEFV
Sbjct: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVNRRLGRNLEFV 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPI  TD FVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 361 LSKMNPDQPPILSTDLFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 426

[Close]

BLAST of Carg22674 vs. ExPASy Swiss-Prot
Match: Q9M2A1 (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2)

HSP 1 Score: 458.4 bits (1178), Expect = 9.0e-128
Identity = 219/388 (56.44%), Postives = 296/388 (76.29%), Query Frame = 0


Query: 39  ARKILRQNKEKGSFAGDDFSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSS 98
           A+K+++++K    F+     ++++ +++ LSQRR P +A EIFL+ KS +   N  TL +
Sbjct: 28  AKKLIKESKLSRDFSQKIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCA 87

Query: 99  LMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRY 158
           LM+ + + G +L+A  IW+E++NSCFVP V V+SKL++ Y +   FD++ K+   V  R+
Sbjct: 88  LMLCFAENGFVLRARTIWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARH 147

Query: 159 LHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEME 218
             LLP   SLAISCFGK+GQLELME  + EM S GV +++ T N  + YYS FGSL +ME
Sbjct: 148 SKLLPVVSSLAISCFGKNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKME 207

Query: 219 TAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSY 278
            AYGR+K+   +IE+E I A+  AY+++RKFYRL EFL DVGL R+N+GN+LWN +LLSY
Sbjct: 208 KAYGRVKKFGIVIEEEEIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSY 267

Query: 279 AANFKMKSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDL 338
           AA+FKMKSLQREF+ M++AGF+PD+TTFNIRA+AFSRM L WDLHL+LEHM+ + I PDL
Sbjct: 268 AADFKMKSLQREFIGMLDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDL 327

Query: 339 VTYGCVVDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQ 398
           VT+GCVVDAY+D+RL RNLEFV ++MN D  P+ LTDP  FE LGKGDFH+SSEA ++F 
Sbjct: 328 VTFGCVVDAYMDKRLARNLEFVYNRMNLDDSPLVLTDPLAFEVLGKGDFHLSSEAVLEFS 387

Query: 399 KQKKWTYRELISLYLKKQHRRDQVFWNY 427
            +K WTYR+LI +YLKK+ RRDQ+FWNY
Sbjct: 388 PRKNWTYRKLIGVYLKKKLRRDQIFWNY 415

[Close]

BLAST of Carg22674 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-13
Identity = 77/351 (21.94%), Postives = 142/351 (40.46%), Query Frame = 0


Query: 68  LSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPS 127
           +  +R    A+ +F E+       N  T + L+  +   G +  A  ++++M     +P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239

Query: 128 VLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLR 187
           V+  + L++ Y K+R+ DD  K+L  + L+ L     +Y++ I+   + G+++ +   L 
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299

Query: 188 EMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMAFAYIRER 247
           EM   G  +D  T N+ I  Y   G+  +    +  + R           ++  +  +  
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359

Query: 248 KFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFN 307
              R  EFL  + +R        +  L+  ++    M    R    M + GF+P + T+N
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419

Query: 308 IRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAY-----VDRRLGRNLEFVLS 367
                      + D    LE MK   + PD+V+Y  V+  +     VD  L    E V  
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479

Query: 368 KMNPDQPPI-SLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLY 413
            + PD     SL   F  +   K    +  E         ++TY  LI+ Y
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

[Close]

BLAST of Carg22674 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.6e-13
Identity = 76/313 (24.28%), Postives = 126/313 (40.26%), Query Frame = 0


Query: 92  NNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVL 151
           N  T ++++  Y   G   +A  ++  M  +  VP+    + +L+  GK  R +++IK+L
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444

Query: 152 DQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIVYYSIF 211
             +K          ++  ++  G  G  + +    REM S G   D  T N+ I  Y   
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504

Query: 212 GSLMEMETAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLGE----FLRDVGLRRKNV- 271
           GS ++    YG + R+ F        A+  A  R+   +R GE     ++  G +     
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD-WRSGENVISDMKSKGFKPTETS 564

Query: 272 -----------GNLL-----------------WNLLLLSYAANFKMKSL---QREFLAMV 331
                      GN L                 W LL     ANFK ++L   +R F    
Sbjct: 565 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 624

Query: 332 EAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGR 369
           + G+ PD+  FN     F+R ++       LE ++   + PDLVTY  ++D YV R    
Sbjct: 625 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 684

[Close]

BLAST of Carg22674 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.6e-10
Identity = 57/277 (20.58%), Postives = 126/277 (45.49%), Query Frame = 0


Query: 77  AQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLN 136
           A ++F E+K+  F  +  T ++L+  Y       +A  +  EM+ + F PS++  + L++
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 137 TYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPV 196
            Y +    D+ +++ +Q+  +        Y+  +S F + G++E   +   EM ++G   
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417

Query: 197 DSRTGNSFIVYYSIFGSLMEMETAYGRLK---RSRFLIEKEGILAMAFAYIRERKFYRLG 256
           +  T N+FI  Y   G   EM   +  +     S  ++    +LA+      + +   + 
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477

Query: 257 EFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFNIRAMAF 316
           + ++  G   +      +N L+ +Y+     +     +  M++AG  PD++T+N    A 
Sbjct: 478 KEMKRAGFVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 537

Query: 317 SRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVD 351
           +R  +       L  M+  + +P+ +TY  ++ AY +
Sbjct: 538 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571

[Close]

BLAST of Carg22674 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.8e-09
Identity = 69/308 (22.40%), Postives = 131/308 (42.53%), Query Frame = 0


Query: 59  INHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEE 118
           +  S +I+   +    + A+E++ E+ +     +  T +SL+  +     L +A  +++ 
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375

Query: 119 MLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQ 178
           M++    P ++  S L+N+Y K +R DD +++  ++  + L      Y+  +  F + G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435

Query: 179 LELMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILA 238
           L   +   +EMVS GVP    T    +      G L +    + ++++SR  +       
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495

Query: 239 MAFAYIRERKF---YRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMV 298
           +        K    + L   L D G++   V    +N+++        +      F  M 
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVV---TYNVMIGGLCKKGSLSEADMLFRKMK 555

Query: 299 EAGFNPDITTFNIRAMA-FSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLG 358
           E G  PD  T+NI   A      L+  + L +E MK      D  T   V+D   DRRL 
Sbjct: 556 EDGCTPDDFTYNILIRAHLGGSGLISSVEL-IEEMKVCGFSADSSTIKMVIDMLSDRRLD 615

Query: 359 RNLEFVLS 363
           ++   +LS
Sbjct: 616 KSFLDMLS 619

[Close]

BLAST of Carg22674 vs. ExPASy TrEMBL
Match: A0A6J1FC40 (pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita moschata OX=3662 GN=LOC111444056 PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 1.8e-240
Identity = 423/426 (99.30%), Postives = 424/426 (99.53%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDD SIN
Sbjct: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDSSIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPVDSRTGNSFI YYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 181 LMENTLREMVSSGVPVDSRTGNSFIAYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGN+LWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNMLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV
Sbjct: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 426

[Close]

BLAST of Carg22674 vs. ExPASy TrEMBL
Match: A0A6J1HSM5 (pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita maxima OX=3661 GN=LOC111465788 PE=4 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 2.0e-234
Identity = 416/426 (97.65%), Postives = 417/426 (97.89%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           MELNSLVAAVANPHCFPTNLKQKR  LFQ RRPAGRASARKILRQNKEKGSFA DD SIN
Sbjct: 1   MELNSLVAAVANPHCFPTNLKQKRSFLFQHRRPAGRASARKILRQNKEKGSFADDDSSIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML
Sbjct: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE
Sbjct: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSGVPV SRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA
Sbjct: 181 LMENTLREMVSSGVPVGSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN
Sbjct: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYV+RRLGRNLEFV
Sbjct: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVNRRLGRNLEFV 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQPPI  TD FVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD
Sbjct: 361 LSKMNPDQPPILSTDLFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 426

[Close]

BLAST of Carg22674 vs. ExPASy TrEMBL
Match: A0A6J1D726 (pentatricopeptide repeat-containing protein At3g42630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018218 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 2.1e-196
Identity = 350/426 (82.16%), Postives = 382/426 (89.67%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           M++NSL A +  P  FP NLKQKR I    RR  GR SARK    +K +GSF  DDF  +
Sbjct: 1   MDMNSLAAMLPLPQIFPANLKQKRLIFSHHRRSVGRTSARK----DKGEGSFVDDDFYAD 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           HSQ+I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YIDGG LLQA+AIWEEML
Sbjct: 61  HSQMIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NS FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPEA+SLAISCFGKHGQLE
Sbjct: 121 NSSFVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LMENTLREMVSSG PV+S TGNSFI++YSIFGSLMEMETAYGRLKRSRFLIEKEGI+AMA
Sbjct: 181 LMENTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAY+R+RKFYRLGEFLRDVGL R+NVGNLLWNLLLLSYAANFKMKSLQREFL MVEAGF+
Sbjct: 241 FAYLRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFH 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PD+TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCVVDAYVDRRLGRNL+F 
Sbjct: 301 PDLTTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFA 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNPDQ P+SLT+ FVFEALGKGDFHMSSEAFMQFQ+QKKWTYRELISLYLK+Q+RRD
Sbjct: 361 LSKMNPDQTPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRD 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 422

[Close]

BLAST of Carg22674 vs. ExPASy TrEMBL
Match: A0A1S3BP30 (pentatricopeptide repeat-containing protein At3g42630-like OS=Cucumis melo OX=3656 GN=LOC103492176 PE=4 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 6.1e-196
Identity = 349/426 (81.92%), Postives = 382/426 (89.67%), Query Frame = 0


Query: 1   MELNSLVAAVANPHCFPTNLKQKRPILFQQRRPAGRASARKILRQNKEKGSFAGDDFSIN 60
           M+++ LV  VANP+CFP N KQ+RP+L  QR  A RAS+ KI +Q+ E GS     F+IN
Sbjct: 1   MKMDFLVTTVANPYCFPRNFKQERPMLSHQRHTACRASSCKIFQQHNE-GSSVDYGFNIN 60

Query: 61  HSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEML 120
           +SQVI+KLS+RR P LA+EIFLELKSE FPLNNSTLS++MV YID G  LQA+A+WEEML
Sbjct: 61  NSQVIKKLSRRRMPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEML 120

Query: 121 NSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLE 180
           NSCF PSV VISKL N YGKM  FD I KVLDQVKLRY HLLPEAYSLAISCFGKH QLE
Sbjct: 121 NSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLE 180

Query: 181 LMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMA 240
           LME+TLREMVSSG  V+S TGNSFI+YYS+FGSL+EMETAYGRLKRSRFLIEK+GI+AMA
Sbjct: 181 LMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMA 240

Query: 241 FAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFN 300
           FAYIR+RKFYRLGEFLRDVGL RKNVGNLLWNLLLLSYAANFKMKSLQREFL MVEAGFN
Sbjct: 241 FAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFN 300

Query: 301 PDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFV 360
           PD+TTFNIRA+AFSRMDLLWDLHLSLEHMKH+ IEPDLVTYGCVVDAYVDRRLGRNLEF+
Sbjct: 301 PDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFI 360

Query: 361 LSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRD 420
           LSKMNP QPP+SLTD FVFEALGKGDFHMSSEAFMQF+KQKKWTYRELISLYLKKQHRR+
Sbjct: 361 LSKMNPVQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKQHRRN 420

Query: 421 QVFWNY 427
           QVFWNY
Sbjct: 421 QVFWNY 425

[Close]

BLAST of Carg22674 vs. ExPASy TrEMBL
Match: A0A6J1D9V6 (pentatricopeptide repeat-containing protein At3g42630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018218 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 8.1e-180
Identity = 317/363 (87.33%), Postives = 343/363 (94.49%), Query Frame = 0


Query: 64  VIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSC 123
           +I+KLS+RR PVLAQEIF ELKSE  PL NSTLS+LM  YIDGG LLQA+AIWEEMLNS 
Sbjct: 1   MIKKLSERRLPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWEEMLNSS 60

Query: 124 FVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELME 183
           FVPSV +ISKL +T+GKM RFDDIIKVLDQVKLRY HLLPEA+SLAISCFGKHGQLELME
Sbjct: 61  FVPSVNLISKLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELME 120

Query: 184 NTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMAFAY 243
           NTLREMVSSG PV+S TGNSFI++YSIFGSLMEMETAYGRLKRSRFLIEKEGI+AMAFAY
Sbjct: 121 NTLREMVSSGFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAY 180

Query: 244 IRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDI 303
           +R+RKFYRLGEFLRDVGL R+NVGNLLWNLLLLSYAANFKMKSLQREFL MVEAGF+PD+
Sbjct: 181 LRKRKFYRLGEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDL 240

Query: 304 TTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFVLSK 363
           TTFNIRA+AFSRMDLLWDLHLSLEHM+HVKIEPDLVTYGCVVDAYVDRRLGRNL+F LSK
Sbjct: 241 TTFNIRALAFSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSK 300

Query: 364 MNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRDQVF 423
           MNPDQ P+SLT+ FVFEALGKGDFHMSSEAFMQFQ+QKKWTYRELISLYLK+Q+RRDQVF
Sbjct: 301 MNPDQTPVSLTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVF 360

Query: 424 WNY 427
           WNY
Sbjct: 361 WNY 363

[Close]

BLAST of Carg22674 vs. TAIR 10
Match: AT3G42630.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 458.4 bits (1178), Expect = 6.4e-129
Identity = 219/388 (56.44%), Postives = 296/388 (76.29%), Query Frame = 0


Query: 39  ARKILRQNKEKGSFAGDDFSINHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSS 98
           A+K+++++K    F+     ++++ +++ LSQRR P +A EIFL+ KS +   N  TL +
Sbjct: 28  AKKLIKESKLSRDFSQKIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCA 87

Query: 99  LMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRY 158
           LM+ + + G +L+A  IW+E++NSCFVP V V+SKL++ Y +   FD++ K+   V  R+
Sbjct: 88  LMLCFAENGFVLRARTIWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARH 147

Query: 159 LHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEME 218
             LLP   SLAISCFGK+GQLELME  + EM S GV +++ T N  + YYS FGSL +ME
Sbjct: 148 SKLLPVVSSLAISCFGKNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKME 207

Query: 219 TAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSY 278
            AYGR+K+   +IE+E I A+  AY+++RKFYRL EFL DVGL R+N+GN+LWN +LLSY
Sbjct: 208 KAYGRVKKFGIVIEEEEIRAVVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSY 267

Query: 279 AANFKMKSLQREFLAMVEAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDL 338
           AA+FKMKSLQREF+ M++AGF+PD+TTFNIRA+AFSRM L WDLHL+LEHM+ + I PDL
Sbjct: 268 AADFKMKSLQREFIGMLDAGFSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDL 327

Query: 339 VTYGCVVDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQ 398
           VT+GCVVDAY+D+RL RNLEFV ++MN D  P+ LTDP  FE LGKGDFH+SSEA ++F 
Sbjct: 328 VTFGCVVDAYMDKRLARNLEFVYNRMNLDDSPLVLTDPLAFEVLGKGDFHLSSEAVLEFS 387

Query: 399 KQKKWTYRELISLYLKKQHRRDQVFWNY 427
            +K WTYR+LI +YLKK+ RRDQ+FWNY
Sbjct: 388 PRKNWTYRKLIGVYLKKKLRRDQIFWNY 415

[Close]

BLAST of Carg22674 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 8.1e-15
Identity = 77/351 (21.94%), Postives = 142/351 (40.46%), Query Frame = 0


Query: 68  LSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPS 127
           +  +R    A+ +F E+       N  T + L+  +   G +  A  ++++M     +P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239

Query: 128 VLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLR 187
           V+  + L++ Y K+R+ DD  K+L  + L+ L     +Y++ I+   + G+++ +   L 
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299

Query: 188 EMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMAFAYIRER 247
           EM   G  +D  T N+ I  Y   G+  +    +  + R           ++  +  +  
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359

Query: 248 KFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFN 307
              R  EFL  + +R        +  L+  ++    M    R    M + GF+P + T+N
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419

Query: 308 IRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAY-----VDRRLGRNLEFVLS 367
                      + D    LE MK   + PD+V+Y  V+  +     VD  L    E V  
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479

Query: 368 KMNPDQPPI-SLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLY 413
            + PD     SL   F  +   K    +  E         ++TY  LI+ Y
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

[Close]

BLAST of Carg22674 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 6.8e-14
Identity = 76/313 (24.28%), Postives = 126/313 (40.26%), Query Frame = 0


Query: 92  NNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVL 151
           N  T ++++  Y   G   +A  ++  M  +  VP+    + +L+  GK  R +++IK+L
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444

Query: 152 DQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPVDSRTGNSFIVYYSIF 211
             +K          ++  ++  G  G  + +    REM S G   D  T N+ I  Y   
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504

Query: 212 GSLMEMETAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLGE----FLRDVGLRRKNV- 271
           GS ++    YG + R+ F        A+  A  R+   +R GE     ++  G +     
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD-WRSGENVISDMKSKGFKPTETS 564

Query: 272 -----------GNLL-----------------WNLLLLSYAANFKMKSL---QREFLAMV 331
                      GN L                 W LL     ANFK ++L   +R F    
Sbjct: 565 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 624

Query: 332 EAGFNPDITTFNIRAMAFSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGR 369
           + G+ PD+  FN     F+R ++       LE ++   + PDLVTY  ++D YV R    
Sbjct: 625 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 684

[Close]

BLAST of Carg22674 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 5.4e-11
Identity = 57/277 (20.58%), Postives = 126/277 (45.49%), Query Frame = 0


Query: 77  AQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISKLLN 136
           A ++F E+K+  F  +  T ++L+  Y       +A  +  EM+ + F PS++  + L++
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 137 TYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLREMVSSGVPV 196
            Y +    D+ +++ +Q+  +        Y+  +S F + G++E   +   EM ++G   
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417

Query: 197 DSRTGNSFIVYYSIFGSLMEMETAYGRLK---RSRFLIEKEGILAMAFAYIRERKFYRLG 256
           +  T N+FI  Y   G   EM   +  +     S  ++    +LA+      + +   + 
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477

Query: 257 EFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFNIRAMAF 316
           + ++  G   +      +N L+ +Y+     +     +  M++AG  PD++T+N    A 
Sbjct: 478 KEMKRAGFVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 537

Query: 317 SRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVD 351
           +R  +       L  M+  + +P+ +TY  ++ AY +
Sbjct: 538 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571

[Close]

BLAST of Carg22674 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-10
Identity = 69/308 (22.40%), Postives = 131/308 (42.53%), Query Frame = 0


Query: 59  INHSQVIEKLSQRRTPVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEE 118
           +  S +I+   +    + A+E++ E+ +     +  T +SL+  +     L +A  +++ 
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375

Query: 119 MLNSCFVPSVLVISKLLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQ 178
           M++    P ++  S L+N+Y K +R DD +++  ++  + L      Y+  +  F + G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435

Query: 179 LELMENTLREMVSSGVPVDSRTGNSFIVYYSIFGSLMEMETAYGRLKRSRFLIEKEGILA 238
           L   +   +EMVS GVP    T    +      G L +    + ++++SR  +       
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495

Query: 239 MAFAYIRERKF---YRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMV 298
           +        K    + L   L D G++   V    +N+++        +      F  M 
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVV---TYNVMIGGLCKKGSLSEADMLFRKMK 555

Query: 299 EAGFNPDITTFNIRAMA-FSRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLG 358
           E G  PD  T+NI   A      L+  + L +E MK      D  T   V+D   DRRL 
Sbjct: 556 EDGCTPDDFTYNILIRAHLGGSGLISSVEL-IEEMKVCGFSADSSTIKMVIDMLSDRRLD 615

Query: 359 RNLEFVLS 363
           ++   +LS
Sbjct: 616 KSFLDMLS 619

The following BLAST results are available for this feature:

BLAST of Carg22674 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020945.1	9.0e-242	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022937749.1	3.8e-240	99.30	pentatricopeptide repeat-containing protein At3g42630 [Cucurbita moschata]	[more]
XP_023536679.1	3.2e-239	98.59	pentatricopeptide repeat-containing protein At3g42630 [Cucurbita pepo subsp. pep...	[more]
KAG6586124.1	7.1e-239	99.06	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022966074.1	4.0e-234	97.65	pentatricopeptide repeat-containing protein At3g42630 [Cucurbita maxima]	[more]

BLAST of Carg22674 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2A1	9.0e-128	56.44	Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	1.1e-13	21.94	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
O64624	9.6e-13	24.28	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]
Q9LYZ9	7.6e-10	20.58	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX...	[more]
Q6NQ83	3.8e-09	22.40	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]

BLAST of Carg22674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC40	1.8e-240	99.30	pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HSM5	2.0e-234	97.65	pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita maxima OX=366...	[more]
A0A6J1D726	2.1e-196	82.16	pentatricopeptide repeat-containing protein At3g42630 isoform X1 OS=Momordica ch...	[more]
A0A1S3BP30	6.1e-196	81.92	pentatricopeptide repeat-containing protein At3g42630-like OS=Cucumis melo OX=36...	[more]
A0A6J1D9V6	8.1e-180	87.33	pentatricopeptide repeat-containing protein At3g42630 isoform X2 OS=Momordica ch...	[more]

BLAST of Carg22674 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42630.1	6.4e-129	56.44	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	8.1e-15	21.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G18940.1	6.8e-14	24.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02860.1	5.4e-11	20.58	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22470.1	2.7e-10	22.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 294..351 e-value: 0.006 score: 16.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 165..197 e-value: 5.0E-5 score: 21.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 165..194 e-value: 0.0014 score: 18.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 162..196 score: 8.681407
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..246 e-value: 1.3E-22 score: 82.6 coord: 247..422 e-value: 1.1E-10 score: 43.4
None	No IPR available	PANTHER	PTHR47493	OS08G0520200 PROTEIN	coord: 19..426
None	No IPR available	PANTHER	PTHR47493:SF1	OS08G0520200 PROTEIN	coord: 19..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22674-RA	Carg22674-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding