Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACAAGTGCATGAACACCCACATCTTGGGCATGCTCTCCTCAGAAATGAAGTACCCGCTGAAGAGGAAAAACCCGGCCAGCAGAACCGTCACCAGCGACAAGCCGGCGATGAAGTTCGGAGATAAGGCGTGTGTTGGCGACGTGGGTGAGGCGGAGGTCGGCGAGAAGGGAGTCGACAGTGGCCTGGATTTGGGATTTACTAGGGAGGAGAAGGCGGGCGGCGAAGGCGAATGTTTCGGAGACG GTTAAGAGAGGGAGACAGGCGTCGTGTTGAGGAACGTAGGTGGAGAGTTTGCGGAAAGTGGAAAGGTTCAGAGTGGAGGAGTTGAGAAGAACGGCTCCATGAGTCGGGGTGGTTCGAGCGGCGAGGATATCAAGAAGAGTGGATTTTCCGGCGCCGCTTGGGCCGACAATGGCGAGAATTTGAGAAGGATGCGCTGTGAATGA mRNA sequence
ATGGACAACAAGTGCATGAACACCCACATCTTGGGCATGCTCTCCTCAGAAATGAAGTACCCGCTGAAGAGGAAAAACCCGGCCAGCAGAACCGTCACCAGCGACAAGCCGGCGATGAAGTTCGGAGATAAGGCGTGTGTTGGCGACGTGGGTGAGGCGGAGGTCGGCGAGAAGGGAGTCGACAGTGGCCTGGATTTGGGATTTACTAGGGAGGAGAAGGCGGGCGGCGAAGGCGAATGTTTCGGAGACGAGAGGGAGACAGGCGTCGTGTTGAGGAACGTAGGTGGAGAGTTTGCGGAAAGTGGAAAGGTTCAGAGTGGAGGAGTTGAGAAGAACGGCTCCATGAGTCGGGGTGGTTCGAGCGGCGAGGATATCAAGAAGAGTGGATTTTCCGGCGCCGCTTGGGCCGACAATGGCGAGAATTTGAGAAGGATGCGCTGTGAATGA Coding sequence (CDS)
ATGGACAACAAGTGCATGAACACCCACATCTTGGGCATGCTCTCCTCAGAAATGAAGTACCCGCTGAAGAGGAAAAACCCGGCCAGCAGAACCGTCACCAGCGACAAGCCGGCGATGAAGTTCGGAGATAAGGCGTGTGTTGGCGACGTGGGTGAGGCGGAGGTCGGCGAGAAGGGAGTCGACAGTGGCCTGGATTTGGGATTTACTAGGGAGGAGAAGGCGGGCGGCGAAGGCGAATGTTTCGGAGACGAGAGGGAGACAGGCGTCGTGTTGAGGAACGTAGGTGGAGAGTTTGCGGAAAGTGGAAAGGTTCAGAGTGGAGGAGTTGAGAAGAACGGCTCCATGAGTCGGGGTGGTTCGAGCGGCGAGGATATCAAGAAGAGTGGATTTTCCGGCGCCGCTTGGGCCGACAATGGCGAGAATTTGAGAAGGATGCGCTGTGAATGA Protein sequence
MDNKCMNTHILGMLSSEMKYPLKRKNPASRTVTSDKPAMKFGDKACVGDVGEAEVGEKGVDSGLDLGFTREEKAGGEGECFGDERETGVVLRNVGGEFAESGKVQSGGVEKNGSMSRGGSSGEDIKKSGFSGAAWADNGENLRRMRCE
Homology
BLAST of Carg22143 vs. NCBI nr
Match:
KAG6574211.1 (hypothetical protein SDJN03_28098, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 170.6 bits (431), Expect = 9.9e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MDNKCMNTHILGMLSSEMKYPLKRKNPASRTVTSDKPAMKFGDKACVGDVGEAEVGEKGV 60 MDNKCMNTHILGMLSSEMKYPLKRKNPASRTVTSDKPAMKFGDKACVGDVGEAEVGEKGV Sbjct: 11 MDNKCMNTHILGMLSSEMKYPLKRKNPASRTVTSDKPAMKFGDKACVGDVGEAEVGEKGV 70 Query: 61 DSGLDLGFTREEKAGGEGECFGD 84 DSGLDLGFTREEKAGGEGECFGD Sbjct: 71 DSGLDLGFTREEKAGGEGECFGD 93
BLAST of Carg22143 vs. NCBI nr
Match:
RDX84802.1 (hypothetical protein CR513_34091, partial [Mucuna pruriens])
HSP 1 Score: 76.6 bits (187), Expect = 2.0e-10
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 47 VGDVGEAEVGEKGVDSGLDLGFTREEKAGGEGECFGD--ERETGVVLRNVGGEFAESGKV 106 VG VGE+E GE+G D G ++G EE GGE E FGD ERE G+VL +VGGE +E G Sbjct: 68 VGQVGESEFGEEGGDGGAEVGVGFEE-LGGEEEGFGDGEEREAGIVLGDVGGELSEGGGD 127 Query: 107 QSGGVEKNGSMSRGGSSGEDIKKSGFSGAAWADNGENLRRMRC 148 + GGVE ++ + E++++ SG+AWA +G++L R+ C Sbjct: 128 ERGGVEPELTVGGESAGRENVQEGRLSGSAWAHHGQDLARLGC 169
BLAST of Carg22143 vs. ExPASy TrEMBL
Match:
A0A371G2M3 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_34091 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 9.5e-11
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 47 VGDVGEAEVGEKGVDSGLDLGFTREEKAGGEGECFGD--ERETGVVLRNVGGEFAESGKV 106 VG VGE+E GE+G D G ++G EE GGE E FGD ERE G+VL +VGGE +E G Sbjct: 68 VGQVGESEFGEEGGDGGAEVGVGFEE-LGGEEEGFGDGEEREAGIVLGDVGGELSEGGGD 127 Query: 107 QSGGVEKNGSMSRGGSSGEDIKKSGFSGAAWADNGENLRRMRC 148 + GGVE ++ + E++++ SG+AWA +G++L R+ C Sbjct: 128 ERGGVEPELTVGGESAGRENVQEGRLSGSAWAHHGQDLARLGC 169
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAG6574211.1 9.9e-39 100.00 hypothetical protein SDJN03_28098, partial [Cucurbita argyrosperma subsp. sorori... [more]
RDX84802.1 2.0e-10 45.63 hypothetical protein CR513_34091, partial [Mucuna pruriens] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A371G2M3 9.5e-11 45.63 Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_34091 P... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
A T G G A C A A C A A G T G C A T G A A C A C C C A C A T C T T G G G C A T G C T C T C C T C A G A A A T G A A G T A C C C G C T G A A G A G G A A A A A C C C G G C C A G C A G A A C C G T C A C C A G C G A C A A G C C G G C G A T G A A G T T C G G A G A T A A G G C G T G T G T T G G C G A C G T G G G T G A G G C G G A G G T C G G C G A G A A G G G A G T C G A C A G T G G C C T G G A T T T G G G A T T T A C T A G G G A G G A G A A G G C G G G C G G C G A A G G C G A A T G T T T C G G A G A C G A G A G G G A G A C A G G C G T C G T G T T G A G G A A C G T A G G T G G A G A G T T T G C G G A A A G T G G A A A G G T T C A G A G T G G A G G A G T T G A G A A G A A C G G C T C C A T G A G T C G G G G T G G T T C G A G C G G C G A G G A T A T C A A G A A G A G T G G A T T T T C C G G C G C C G C T T G G G C C G A C A A T G G C G A G A A T T T G A G A A G G A T G C G C T G T G A A T G A 50 100 150 200 250 300 350 400 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 107..121
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 101..135
Relationships
The following mRNA feature(s) are a part of this gene: