Carg21150 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTCCTTCGTTCATCTGGTTCCGGCATCTCTGCGATGGCGACTTCCGATTCAAAACCCGACGATCGGTCTATTTCGTCGCCGGAAACTGAGTTGTTGCCGGAATCTGAATCGCAGCTCTCAGTTCTGGTCTACGGTACGCTTCTTCGTTTTTCTTTCTCTCTCTATTTGTGGGTAATGTTAACAAACAAGCTGCTAGAAGGGAGAGAAAAGATTACCTACACGCGAACTTGATGATTCTGGTTTATTCATTACTAATAAATGAATTGATATCATCCTTTTATTGACAATGAAATTTTACAGTTTTCATATAAAGGATTTAAAAAGCATGCACTCATCGAAATATTACATGAAGTCGAGGGAATGCAAATTGTATGATGACATGTTTAGATTCTACTGCATGCTTTCAATAAATTCTATTAAGAACTTTGTGCCAGCGAAAGATGACTATTTTTACATGCGTAACCAATTTTTCATAATAGAGCGTTCTCCCAGTCGTCAAATTTAAATATATTCTAGTTTGGTGACATTATCTGTTCTTTGTCGCCCACCAATACCATTTATCTTCCCATTCCTCTTCTGCCCATTATTTTCTGAATCTTCTCTCGTAACGACACTCAACTTAATTGCATAACACTTAATAATAGTACGTCTACGTCCTAATGCTGCTTTAGTCTTCTCGTTATCAACTGTTTTCAGTGAAATTGATCGAAACACTGCTTGAATATTTGAAGACATGGAAAAGTGCAGGCGTTCTGCTCTCGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACTTGCTCAACAACGGAGGGGGAACGCTGTAA ATGGAACTCCTTCGTTCATCTGGTTCCGGCATCTCTGCGATGGCGACTTCCGATTCAAAACCCGACGATCGGTCTATTTCGTCGCCGGAAACTGAGTTGTTGCCGGAATCTGAATCGCAGCTCTCAGTTCTGGTCTACGACATGGAAAAGTGCAGGCGTTCTGCTCTCGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACTTGCTCAACAACGGAGGGGGAACGCTGTAA ATGGAACTCCTTCGTTCATCTGGTTCCGGCATCTCTGCGATGGCGACTTCCGATTCAAAACCCGACGATCGGTCTATTTCGTCGCCGGAAACTGAGTTGTTGCCGGAATCTGAATCGCAGCTCTCAGTTCTGGTCTACGACATGGAAAAGTGCAGGCGTTCTGCTCTCGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACTTGCTCAACAACGGAGGGGGAACGCTGTAA MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGGTL Homology
BLAST of Carg21150 vs. NCBI nr
Match: KAG7037542.1 (hypothetical protein SDJN02_01170, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164.5 bits (415), Expect = 4.2e-37 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Carg21150 vs. NCBI nr
Match: XP_023524409.1 (uncharacterized protein LOC111788313 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 102.8 bits (255), Expect = 1.5e-18 Identity = 66/113 (58.41%), Postives = 73/113 (64.60%), Query Frame = 0
BLAST of Carg21150 vs. NCBI nr
Match: XP_004136463.2 (uncharacterized protein LOC101215419 [Cucumis sativus] >KAE8651370.1 hypothetical protein Csa_001898 [Cucumis sativus]) HSP 1 Score: 100.1 bits (248), Expect = 9.7e-18 Identity = 58/101 (57.43%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of Carg21150 vs. NCBI nr
Match: XP_022937053.1 (uncharacterized protein LOC111443468 [Cucurbita moschata]) HSP 1 Score: 97.8 bits (242), Expect = 4.8e-17 Identity = 60/105 (57.14%), Postives = 69/105 (65.71%), Query Frame = 0
BLAST of Carg21150 vs. NCBI nr
Match: XP_023535872.1 (uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.4 bits (241), Expect = 6.3e-17 Identity = 60/105 (57.14%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of Carg21150 vs. ExPASy TrEMBL
Match: A0A0A0LJE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881050 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.7e-18 Identity = 58/101 (57.43%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of Carg21150 vs. ExPASy TrEMBL
Match: A0A6J1FEZ1 (uncharacterized protein LOC111443468 OS=Cucurbita moschata OX=3662 GN=LOC111443468 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.3e-17 Identity = 60/105 (57.14%), Postives = 69/105 (65.71%), Query Frame = 0
BLAST of Carg21150 vs. ExPASy TrEMBL
Match: A0A5A7TBQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007070 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.8e-17 Identity = 59/104 (56.73%), Postives = 66/104 (63.46%), Query Frame = 0
BLAST of Carg21150 vs. ExPASy TrEMBL
Match: A0A1S3CR82 (uncharacterized protein LOC103503784 OS=Cucumis melo OX=3656 GN=LOC103503784 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.8e-17 Identity = 59/104 (56.73%), Postives = 66/104 (63.46%), Query Frame = 0
BLAST of Carg21150 vs. ExPASy TrEMBL
Match: A0A6J1IGC1 (uncharacterized protein LOC111476676 OS=Cucurbita maxima OX=3661 GN=LOC111476676 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16 Identity = 59/105 (56.19%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of Carg21150 vs. TAIR 10
Match: AT5G25570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06 Identity = 21/39 (53.85%), Postives = 32/39 (82.05%), Query Frame = 0
BLAST of Carg21150 vs. TAIR 10
Match: AT5G25570.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06 Identity = 21/39 (53.85%), Postives = 32/39 (82.05%), Query Frame = 0
BLAST of Carg21150 vs. TAIR 10
Match: AT5G25570.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages. ) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06 Identity = 21/39 (53.85%), Postives = 32/39 (82.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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