Carg20551 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCCTACCACCCGGAGGGACCCTGCTTGGAGCGATCCTGGAAGCCCACAAGCTTACAAATTCGTGCATTTTGTAGTTTAAAATCCTGCGAAGTTGTGGGGAAATTTTGACTGATTCGAACGCCTACGCCTCCATTTTCAATCTCTGCTTCGATTTTTTCTATATGCATTTTCCCTCGTTTTGTTCGTAATCATAATCAGTTCGGGCGTTTTCAATTTCTTCAATCTTTCCGTCGAAAACGACTCCATTTCTTCGTTTCTGTTTCCTCAATCCCCATTTTCATCGGCTTTCGCATAATCTCTTTTCGTAATTTGTAATTATTTCTAACCTTGTTTTGTTGCACTGTTCTCCGCCTCGGTTTCGTCGCTTGGTTGAGATATTAAGGTACGCGTTTCTGAATTTGGTTCTTTTGTATCAGATTAGCATTTCTGTGCATCGCATTTTGTTTTTGGTTCCGGCGATCGTTTTTCTGCGTCTGTAGGAGTCTGATTCTTTGATTTATAATATATATATATATATATATATATATATATATTTTTTTTTTTCTGGCTTATTTTCTGTGTTTTTCCGTGATTTTATTTGGATCCTGGAAGTTTGTCTTTCATGATTTTGTGATCGGCGTTTGAATTTGCTTGTTGTTTATGCTTTTGATATCGGCATTTCAATGTCAAGACCTCATGAGTTCTGGTTTATGTCAACTGAAAATTGGAGCAAATTGTTCTTGTGCCTTCAGTTCATGTTTAATTCTCTAAGTATCGTCAATGATAATGTTTTGGCCTTCATACAACTATTATCGTTCTAGTCAGATTACGAAATTGTAGTCTCTGTTTATTGATATGAAATTATCCACTTGGAAAGTTTTGCTGAGGTTTTGGGATCATTTGCTATTTTCAGAATGGCTGCTGCAGTATTTCACCAATCTCTTGGGACTTTTCTTCCCCATGGACAAGCTAATGTTGCGAGTAATGTGCCAAAATTGAATTCAAAGTGTTTCAAGGTCGAAATTGGGGTCTTCAGAAAGAATTCTCCTAGATCTAGAAATACTTCTATAAGAGCAATTCAATCATCTTCTTCTCAAACTTCAGTTGTTGATCCCATTTTATCACCTTCAATCAACACCTCTGATGACTCGCAAAAAAAGCAGAGTAAGTTGGTTTGTTTCCAATAATTATAGTTTCTAAGTGAAGTAGAGGTGTTTGTTGGTCTTTCTTTGTATAATTCTTCAACTTATAGGCTGAAGTTCTTGCTTTCTGAAGTATTTTTTATTCTAATGTAATTCTGCACATCATCAGATGAAGCTGCTTTGATCTTGATTCGACACGGAGAATCGTTGTGGAACGAAAAGAACTTATTTACCGGCTGTGTTGATGTGCCACTGACCAGGAAAGGTGTGGAAGAGGCAATTGAAGCTGGCAAGAGAATCAGCAACATACCTGTCGACATGATCTATACGTCGTCGCTCATTCGTGCACAGATGACTGCTATGCTTGCCATGACTCAACATCGTCGTAAGAAGGTAATTAGATATTTTTAAGTGCTTTGAACTTCAAAGTTATTTTTTATGTTACCTTAAGAGTTTTGACACCCTGAATCCCTGAAAGAAGGTATGGAAAAATCTCCTTAGTTAAATTAGAGAAGCAGTTCTGTAATATTTGGATATATCTTCATTTTTATGATCATCAGTATGACCATAATTGGAACGATTCGATTTTTGATACCTCAAATCACAGGTTGCCACGTAAACTCAAGGGTAAAAACGGTGGTAAATTTTTCTTTTGTAAGACGGGAGACTCAAGAACTTTAAAATTTAAATATGCATTCAAAACCAACATAAAGGTATATATGTGGAGTCAAATCAAAATGGTTTTACACAAATTAAAAAAAAAAAAAAAAAAAAAAAAATTACTGCCCTTTTTACCCTTGAGTATATGTGGCGACCTGTGATTTGAGATATCGAAAATCGGGTTGTTATATGTTAAGGATATTTAGTAATGAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAGGGCAAATATTAGATATTTGCTTATTACCATAGGTATCTTTCCATTTATTACTATTTCCATATCCTTGTAATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGGGGTGGTGATTCAGCAAACATTCACATTATAGTTTGGTATCAGAGCTAGACACCGAGGCGGTGTGCCAGCGAAGACGTTGGGCGCCTAAGGAGGGTGGATTGTGAAATCTCACGTTGGTTGGAGAGAGAAACAAAACATTTCTTGTAAGAGTGTGAAAACCTCTCCCTAGTGGACGTATTTTAAAACCTTAGGGAAAGCTCAAAACGAAACATTCCTTATAAGGGTGTGGAAACGTCAACCTAGTGAGTGTGTTTTAAAACTTTGAGGGAAAGCCCGAAAGGAAAAGTCCAAAGAGGACAATATCTACTTTCAGTGGGCTTGGGTGTTACATTTTTTTTTTTGTTTTTTTTTACAAGACCATGTTTTACACCTACAATTGTGTTCTCCCTGATCTACTATTACATTCCTTTTATTAGCTTACCTCTAACTAACTATTCATGCATGCATATAGGTTCCAGTTATCATTCACAACGAAACCGAGCAGGCAAGGGTTTGGAGTCAAATATTTAGTGAAGAAACCATAAAACAATCCATCCCAGTAATAGCATCTTGGCGATTGAATGAAAGAATGTAATTGTCGCCCCTATTTTACCCTCTTTGTTATTAATATTAAACTCGTCAAACGTCTTTCTAAAATAGATGCTGTTTGCAGGTATGGGGAACTACAGGGTCTCAATAAGCAGGAGACCGCTGATAGATATGGTAAAGAACAAGTCCACGAATGGCGTCGGAGTTACGACATTCCTCCCCCAAATGGCGAGAGTTTGGAAATGTGTGCGGAGAGAGCTGTTGCTTATTTTAAAGACCAAGTATGATGACTGCTCTTTTGCTCACGTCTCTTTATATTTGACTGCATCTCGCGCCATTGTTGGAGATCAAGGTTCATCATGTGAGATTCTTTCATCTGACTGCTTAAGTTTTGCCCTGCAGATTGTCCCCCAACTGCAATCTGGAAAGAATGTAATGATAGCAGCACATGGAAACTCATTGAGGTCCATAATCATGTATCTTGACAAACTAACTTCTCAAGAGGTAATATACCATTTCATTACACTGGGTCAACCATTTTATACACCTTACCTTACGTTGTGAGATCCCACGTCGGTTGGAGAGGAGAATGAAGCATTTTTTAGAAGAGTGTGGAAACCTCTCCCCAATAGACGCGTTTTAAAAACTTAGAAGGAAACCCAGAAAGGGAAAGCCCAAAGACAATATCTGCTAGCGGTGGACTTGGGCTGTTATATATGCCGTTGTGTAATAACATGTCAATCAAAAACATCTTTCAGGTTATTAGCTTAGAGCTATCAACTGGAATACCCATGCTCTACATATTTAAAGAAGGAAACTTCATTAGGAGGGGAAGTCCTGCAGGACCTTCTGAGGCAGGCGTTTACGCCTATACCAGGGTACGCGATTTTATCCTTCTTCTTTGTTCTCCCTACCACCATAGGAACGGCCCGGTCTGCCGTGCCCATTTTATCCTTCAACGCTAACTATCTGGTTGTTACGGGTTCGGTGCAAAAGAGATATAAATGATGAAAACGACTCCTATAAGAGAAACATGCTGAGTCCTAACGCTTAGTTTGGCTTTTCATTCTGTCATAGATTTAGTACTAAAACCTGTTTTAATTGGAACTTTTTGCAGCGTTTGGCTCTCTACAGACAGAAGTTAGACGAGATGTTAAATTAAAACAATGTTGCTAAACTACAGGTAACCATCATTCTTCCTCTTTCTTCAATTCATTACAGATCCATTTTGCTGATATATTATGTATATTATCGTTTGTTCTCAGGATATTACTTCCAATTGCACTGCAACTATTAATGACGTGCTTTTGTGGTAATTAGACTGCAATGAAAAGAAAAATTCTCCGACCTAGAAGAAACGAGTTTGATCGTAGTCTTTTCGTTTTTCCTCGGAACTGCAATTATACAACTAGTTTGCAAGTATTCTCCTTCGTTCGTTTGATTGTTCGTTACTATTATTATTATTGTTTGTGGTATTGAATCTCTGTGCCAAACCATGTAAGGTTGAGGTATATACCCATTGTAGTGCTAGGAAAGTGTTCATTAAATAGCTATTGAAAAGTAGATGCTTCTCT AAGCCTACCACCCGGAGGGACCCTGCTTGGAGCGATCCTGGAAGCCCACAAGCTTACAAATTCGTGCATTTTGTAGTTTAAAATCCTGCGAAGTTGTGGGGAAATTTTGACTGATTCGAACGCCTACGCCTCCATTTTCAATCTTTCCGTCGAAAACGACTCCATTTCTTCGTTTCTGTTTCCTCAATCCCCATTTTCATCGGCTTTCGCATAATCTCTTTTCGTAATTTGTAATTATTTCTAACCTTGTTTTGTTGCACTGTTCTCCGCCTCGGTTTCGTCGCTTGGTTGAGATATTAAGAATGGCTGCTGCAGTATTTCACCAATCTCTTGGGACTTTTCTTCCCCATGGACAAGCTAATGTTGCGAGTAATGTGCCAAAATTGAATTCAAAGTGTTTCAAGGTCGAAATTGGGGTCTTCAGAAAGAATTCTCCTAGATCTAGAAATACTTCTATAAGAGCAATTCAATCATCTTCTTCTCAAACTTCAGTTGTTGATCCCATTTTATCACCTTCAATCAACACCTCTGATGACTCGCAAAAAAAGCAGAATGAAGCTGCTTTGATCTTGATTCGACACGGAGAATCGTTGTGGAACGAAAAGAACTTATTTACCGGCTGTGTTGATGTGCCACTGACCAGGAAAGGTGTGGAAGAGGCAATTGAAGCTGGCAAGAGAATCAGCAACATACCTGTCGACATGATCTATACGTCGTCGCTCATTCGTGCACAGATGACTGCTATGCTTGCCATGACTCAACATCGTCGTAAGAAGGTTCCAGTTATCATTCACAACGAAACCGAGCAGGCAAGGGTTTGGAGTCAAATATTTAGTGAAGAAACCATAAAACAATCCATCCCAGTAATAGCATCTTGGCGATTGAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAGCAGGAGACCGCTGATAGATATGGTAAAGAACAAGTCCACGAATGGCGTCGGAGTTACGACATTCCTCCCCCAAATGGCGAGAGTTTGGAAATGTGTGCGGAGAGAGCTGTTGCTTATTTTAAAGACCAAATTGTCCCCCAACTGCAATCTGGAAAGAATGTAATGATAGCAGCACATGGAAACTCATTGAGGTCCATAATCATGTATCTTGACAAACTAACTTCTCAAGAGGTTATTAGCTTAGAGCTATCAACTGGAATACCCATGCTCTACATATTTAAAGAAGGAAACTTCATTAGGAGGGGAAGTCCTGCAGGACCTTCTGAGGCAGGCGTTTACGCCTATACCAGGGATATTACTTCCAATTGCACTGCAACTATTAATGACGTGCTTTTGTGGTAATTAGACTGCAATGAAAAGAAAAATTCTCCGACCTAGAAGAAACGAGTTTGATCGTAGTCTTTTCGTTTTTCCTCGGAACTGCAATTATACAACTAGTTTGCAAGTATTCTCCTTCGTTCGTTTGATTGTTCGTTACTATTATTATTATTGTTTGTGGTATTGAATCTCTGTGCCAAACCATGTAAGGTTGAGGTATATACCCATTGTAGTGCTAGGAAAGTGTTCATTAAATAGCTATTGAAAAGTAGATGCTTCTCT ATGGCTGCTGCAGTATTTCACCAATCTCTTGGGACTTTTCTTCCCCATGGACAAGCTAATGTTGCGAGTAATGTGCCAAAATTGAATTCAAAGTGTTTCAAGGTCGAAATTGGGGTCTTCAGAAAGAATTCTCCTAGATCTAGAAATACTTCTATAAGAGCAATTCAATCATCTTCTTCTCAAACTTCAGTTGTTGATCCCATTTTATCACCTTCAATCAACACCTCTGATGACTCGCAAAAAAAGCAGAATGAAGCTGCTTTGATCTTGATTCGACACGGAGAATCGTTGTGGAACGAAAAGAACTTATTTACCGGCTGTGTTGATGTGCCACTGACCAGGAAAGGTGTGGAAGAGGCAATTGAAGCTGGCAAGAGAATCAGCAACATACCTGTCGACATGATCTATACGTCGTCGCTCATTCGTGCACAGATGACTGCTATGCTTGCCATGACTCAACATCGTCGTAAGAAGGTTCCAGTTATCATTCACAACGAAACCGAGCAGGCAAGGGTTTGGAGTCAAATATTTAGTGAAGAAACCATAAAACAATCCATCCCAGTAATAGCATCTTGGCGATTGAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAGCAGGAGACCGCTGATAGATATGGTAAAGAACAAGTCCACGAATGGCGTCGGAGTTACGACATTCCTCCCCCAAATGGCGAGAGTTTGGAAATGTGTGCGGAGAGAGCTGTTGCTTATTTTAAAGACCAAATTGTCCCCCAACTGCAATCTGGAAAGAATGTAATGATAGCAGCACATGGAAACTCATTGAGGTCCATAATCATGTATCTTGACAAACTAACTTCTCAAGAGGTTATTAGCTTAGAGCTATCAACTGGAATACCCATGCTCTACATATTTAAAGAAGGAAACTTCATTAGGAGGGGAAGTCCTGCAGGACCTTCTGAGGCAGGCGTTTACGCCTATACCAGGGATATTACTTCCAATTGCACTGCAACTATTAATGACGTGCTTTTGTGGTAA MAAAVFHQSLGTFLPHGQANVASNVPKLNSKCFKVEIGVFRKNSPRSRNTSIRAIQSSSSQTSVVDPILSPSINTSDDSQKKQNEAALILIRHGESLWNEKNLFTGCVDVPLTRKGVEEAIEAGKRISNIPVDMIYTSSLIRAQMTAMLAMTQHRRKKVPVIIHNETEQARVWSQIFSEETIKQSIPVIASWRLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFKDQIVPQLQSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGNFIRRGSPAGPSEAGVYAYTRDITSNCTATINDVLLW Homology
BLAST of Carg20551 vs. NCBI nr
Match: KAG7020203.1 (hypothetical protein SDJN02_16886 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 671.4 bits (1731), Expect = 4.1e-189 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
BLAST of Carg20551 vs. NCBI nr
Match: XP_022951567.1 (uncharacterized protein LOC111454345 [Cucurbita moschata] >XP_022951568.1 uncharacterized protein LOC111454345 [Cucurbita moschata]) HSP 1 Score: 638.3 bits (1645), Expect = 3.9e-179 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of Carg20551 vs. NCBI nr
Match: KAG6585283.1 (hypothetical protein SDJN03_18016, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 638.3 bits (1645), Expect = 3.9e-179 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of Carg20551 vs. NCBI nr
Match: XP_023537289.1 (uncharacterized protein LOC111798405 [Cucurbita pepo subsp. pepo] >XP_023537290.1 uncharacterized protein LOC111798405 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 632.9 bits (1631), Expect = 1.6e-177 Identity = 321/324 (99.07%), Postives = 322/324 (99.38%), Query Frame = 0
BLAST of Carg20551 vs. NCBI nr
Match: XP_023001903.1 (uncharacterized protein LOC111495946 [Cucurbita maxima] >XP_023001904.1 uncharacterized protein LOC111495946 [Cucurbita maxima]) HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177 Identity = 320/324 (98.77%), Postives = 322/324 (99.38%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy Swiss-Prot
Match: Q9LM13 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 OS=Arabidopsis thaliana OX=3702 GN=gpmA1 PE=2 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 7.2e-128 Identity = 236/325 (72.62%), Postives = 273/325 (84.00%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy Swiss-Prot
Match: F4I8M8 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2 OS=Arabidopsis thaliana OX=3702 GN=gpmA2 PE=2 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 4.2e-120 Identity = 213/273 (78.02%), Postives = 245/273 (89.74%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy Swiss-Prot
Match: Q6MEW4 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=gpmA PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 6.8e-78 Identity = 137/221 (61.99%), Postives = 175/221 (79.19%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy Swiss-Prot
Match: Q256A6 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=gpmA PE=3 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 3.4e-69 Identity = 132/228 (57.89%), Postives = 176/228 (77.19%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy Swiss-Prot
Match: Q9PLK4 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=gpmA PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 4.9e-68 Identity = 125/220 (56.82%), Postives = 169/220 (76.82%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy TrEMBL
Match: A0A6J1GI25 (Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) OS=Cucurbita moschata OX=3662 GN=LOC111454345 PE=3 SV=1) HSP 1 Score: 638.3 bits (1645), Expect = 1.9e-179 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy TrEMBL
Match: A0A6J1KRX9 (Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) OS=Cucurbita maxima OX=3661 GN=LOC111495946 PE=3 SV=1) HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177 Identity = 320/324 (98.77%), Postives = 322/324 (99.38%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy TrEMBL
Match: A0A6J1BQA7 (Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) OS=Momordica charantia OX=3673 GN=LOC111004782 PE=3 SV=1) HSP 1 Score: 603.2 bits (1554), Expect = 6.7e-169 Identity = 306/324 (94.44%), Postives = 314/324 (96.91%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy TrEMBL
Match: A0A6J1HDT4 (Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) OS=Cucurbita moschata OX=3662 GN=LOC111462603 PE=3 SV=1) HSP 1 Score: 588.6 bits (1516), Expect = 1.7e-164 Identity = 297/326 (91.10%), Postives = 311/326 (95.40%), Query Frame = 0
BLAST of Carg20551 vs. ExPASy TrEMBL
Match: A0A0A0LJU8 (Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) OS=Cucumis sativus OX=3659 GN=Csa_2G308370 PE=3 SV=1) HSP 1 Score: 577.0 bits (1486), Expect = 5.1e-161 Identity = 294/327 (89.91%), Postives = 308/327 (94.19%), Query Frame = 0
BLAST of Carg20551 vs. TAIR 10
Match: AT1G22170.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 458.4 bits (1178), Expect = 5.1e-129 Identity = 236/325 (72.62%), Postives = 273/325 (84.00%), Query Frame = 0
BLAST of Carg20551 vs. TAIR 10
Match: AT1G78050.1 (phosphoglycerate/bisphosphoglycerate mutase ) HSP 1 Score: 432.6 bits (1111), Expect = 3.0e-121 Identity = 213/273 (78.02%), Postives = 245/273 (89.74%), Query Frame = 0
BLAST of Carg20551 vs. TAIR 10
Match: AT5G04120.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-09 Identity = 52/210 (24.76%), Postives = 96/210 (45.71%), Query Frame = 0
BLAST of Carg20551 vs. TAIR 10
Match: AT3G50520.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08 Identity = 57/219 (26.03%), Postives = 93/219 (42.47%), Query Frame = 0
BLAST of Carg20551 vs. TAIR 10
Match: AT5G22620.1 (phosphoglycerate/bisphosphoglycerate mutase family protein ) HSP 1 Score: 42.7 bits (99), Expect = 6.7e-04 Identity = 27/94 (28.72%), Postives = 48/94 (51.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|