Carg20136 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20136
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
LocationCarg_Chr14: 12248350 .. 12251076 (+)
RNA-Seq ExpressionCarg20136
SyntenyCarg20136
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTACGTTCCACTATAAATATTTTCGCCATCGTCAAATTCTCCGTCCCCAGTTCTCGACTCCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTGAATCCATGGGTTTGCACCTTCTTCCCATTGATGCTGCCTTGAAGATTGCTTCTTCGCTTCAGGTTCCAATGGAGTTTTGTGTGATTCTGTTTCCTTTTTTTTTTCTTACTGTAATAATGTCTGTGGATTAATTTATCTATCTCTCTGGAATTTGGGGATGTGATGCGAATCGGTACGAAGGCATCGGACATTTGTTCTTTGGGCTGTTGCTCGCGATTTTGTAAGCAACTCTGCGATTCCGATTACCTGTGGGAATCTCTCACTCGAGAAAGATGGCCTTATATCAATGTTGCTTCGTCTACTGGTTCTTCTTCATCAACTCTCGCACAATCGCCTATCTCCATGGTGCTATTTCCATTATCTTTATCTCTTCTTAATTTAGTAAATTGTTTCTCATATTGGATGGAAATTTGACTTGTTTAGTATATTTAGGTTTCTTGGAATCGATTGAGAGATTTGGAAGGTTCTTTTGTTATTTCCGCCTCTTAATTCAAGTGTAGCTAATGCGCCTTTGGAATTTCCCCTGCCCCTACCTGAAATGGTTTGATTATTTTGTGAAACGTACATTGGATATTTATCTAGAGTTGAACGTAAGTATCTGTTCTTCTAATTCATGAATGTTTAGGCCATATACAGACACTGTTCGATTGTAATGTATTTCCAATGAAAACTCGTAGGATATTAAATCTTAGCCTATTATTGTTTATGTTGATCCTTTGATGATCATTTCCATAATGGTGTTAAGGATCTTTGTTTTTGAAATCAATCCAGAGATTTGAAAGCTTGTTTTGTTCTTTCTTTGTCGCATTACAAATGTTGTTGAATTAGCTCCTTTGATGTTTCTCCTTCCCTATCTGAAATGATTGAACAGCTTAGGGAAACGTGTTAGGGATTTCAGGTTGATTTAGAACTTAAGTTCTGTTATTCTCATTCTTGAATTTAGTTGTTCTACGTGTTTTTTGATACCTTATTTGTTCTGTAGTTGAATGGGCCCTTTCGAATTTTCTCCATCCTTTCTGAAATGGTTGGTTTTCTTAGTGAAACATATATTGGATGTTTATCTTGAGTTGAACTATTGTTGGATATTTATCCGAGTCTTTGTTCTTATATACGTTATGAGATTTCTGTTCATTAACAAACAAATGAAACGTCTTCCAGGGATGGAAAAGCTTTTACATCCAGAGACATATCGAGATATCAAGACGAGCCCAAGCAGCGGTAAAGTTTATAGAACAATACTCTCCTTCTTCCCCAATTGAGGGTGGAGACTATCTCAGGACAATTGTAGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTCTTCAAACCTCACCTGAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTCAAAGTTGGCTTCAAGTTCCTGTATGTCCTGCTGCTTTTGCCATTTTAGTTCAATCATTTGTAGGTTTAAATCACATTTTGGTCGTGAACTTTTATACTCATTCCATTTCGATCCCTTAAATCTTCAAATGTTCTATTTTTGTAACAACCCACCGCTAGCTGATATTGTCTTCTTTGGGTTTTCCCCTTCGAGCTTTCCCTCAAAGTTTTTAAAGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAAGATTATTTATAAGGTTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAATCTTGAGGGAAAGCTCGAAAGAGAGCTCAAAAACGACAATATCGAGAGAGCTAAAAAACGACAATATCAACTAACAGTGGGTGTGGTCTGTTACAGTTTTAGGGATTTAAACCGAAGAGCTTAGCAGTTAGGAAGTTTTTGAGTGATAAACTAAAAAGAGGTAAAAATGAAATACTGTATTATAGGAGAATTAGGATTCCTGCTTCTTTTGTATATGATGCGTCTGAAATTGTTGAGTTGATATCCAACTTGTGGCAGGGGAATGAAATCATAGAAGCACTTGAAAGATGCAAGATCTCAGAGAGGCAAGTAAGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGTATGAGAGACGAGCAACAAACTCGTCGAGTCTCTCTAGCAGCACTCGTAGCAGAAGAAGGGGAAGACGTTCTCGAGGTGCTTAGCCGAGGCGCTGTTAACGAGGTGCTTCGAGTTCAGGTATCTGTAGGTGAGCCCTTTGCCAGTAACTGATCTCAGGAAAGCACATAAAAACACCCTTTGCATCTCCTAAGTAAGCATTCTGCAGCAATGATCTATGTGCTAATTAATAGTTGCTTCATATATTTCAAATAAATGCTTATAGATTTATGCCTGCAGATTCCCAAATGCTAAATACTTGTTGCCCATTCAGGTTTGATTTATAATTGGTATATTTTGTAAATTATTAGGAGCTTTTGGCTCCCCAGTATTGCGTTTCGGACAATCTTAATATCTTAGGTCACAGAGTACTAATAGTATAGTCCATAGCTACAACATTACTTTTCTATTTTGTTCGATTAAATCTTTAACATTCAAGTTTGTGCTATTTTATGTTCTATATTTTTAGAATGATCGAGTTCATGAATATGAATTTGTTATTTGAAAACTTTTTGTTTTCAAAATTTATGAACTAAATAATACAAATT

mRNA sequence

ACTACGTTCCACTATAAATATTTTCGCCATCGTCAAATTCTCCGTCCCCAGTTCTCGACTCCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTGAATCCATGGGTTTGCACCTTCTTCCCATTGATGCTGCCTTGAAGATTGCTTCTTCGCTTCAGGTTCCAATGGAGTTTTGTGTGATTCTGTTTCCTTTTTTTTTTCTTACTGTAATAATGTCTGTGGATTAATTTATCTATCTCTCTGGAATTTGGGGATGTGATGCGAATCGGTACGAAGGCATCGGACATTTGTTCTTTGGGCTGTTGCTCGCGATTTTGTAAGCAACTCTGCGATTCCGATTACCTGTGGGAATCTCTCACTCGAGAAAGATGGCCTTATATCAATGTTGCTTCGTCTACTGGTTCTTCTTCATCAACTCTCGCACAATCGCCTATCTCCATGGGATGGAAAAGCTTTTACATCCAGAGACATATCGAGATATCAAGACGAGCCCAAGCAGCGGTAAAGTTTATAGAACAATACTCTCCTTCTTCCCCAATTGAGGGTGGAGACTATCTCAGGACAATTGTAGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTCTTCAAACCTCACCTGAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTCAAAGTTGGCTTCAAGTTCCTGGGAATGAAATCATAGAAGCACTTGAAAGATGCAAGATCTCAGAGAGGCAAGTAAGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGTATGAGAGACGAGCAACAAACTCGTCGAGTCTCTCTAGCAGCACTCGTAGCAGAAGAAGGGGAAGACGTTCTCGAGGTGCTTAGCCGAGGCGCTGTTAACGAGGTGCTTCGAGTTCAGGTATCTGTAGGTGAGCCCTTTGCCAGTAACTGATCTCAGGAAAGCACATAAAAACACCCTTTGCATCTCCTAAGTAAGCATTCTGCAGCAATGATCTATGTGCTAATTAATAGTTGCTTCATATATTTCAAATAAATGCTTATAGATTTATGCCTGCAGATTCCCAAATGCTAAATACTTGTTGCCCATTCAGGTTTGATTTATAATTGGTATATTTTGTAAATTATTAGGAGCTTTTGGCTCCCCAGTATTGCGTTTCGGACAATCTTAATATCTTAGGTCACAGAGTACTAATAGTATAGTCCATAGCTACAACATTACTTTTCTATTTTGTTCGATTAAATCTTTAACATTCAAGTTTGTGCTATTTTATGTTCTATATTTTTAGAATGATCGAGTTCATGAATATGAATTTGTTATTTGAAAACTTTTTGTTTTCAAAATTTATGAACTAAATAATACAAATT

Coding sequence (CDS)

ATGCGAATCGGTACGAAGGCATCGGACATTTGTTCTTTGGGCTGTTGCTCGCGATTTTGTAAGCAACTCTGCGATTCCGATTACCTGTGGGAATCTCTCACTCGAGAAAGATGGCCTTATATCAATGTTGCTTCGTCTACTGGTTCTTCTTCATCAACTCTCGCACAATCGCCTATCTCCATGGGATGGAAAAGCTTTTACATCCAGAGACATATCGAGATATCAAGACGAGCCCAAGCAGCGGTAAAGTTTATAGAACAATACTCTCCTTCTTCCCCAATTGAGGGTGGAGACTATCTCAGGACAATTGTAGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTCTTCAAACCTCACCTGAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTCAAAGTTGGCTTCAAGTTCCTGGGAATGAAATCATAGAAGCACTTGAAAGATGCAAGATCTCAGAGAGGCAAGTAAGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGTATGAGAGACGAGCAACAAACTCGTCGAGTCTCTCTAGCAGCACTCGTAGCAGAAGAAGGGGAAGACGTTCTCGAGGTGCTTAGCCGAGGCGCTGTTAACGAGGTGCTTCGAGTTCAGGTATCTGTAGGTGAGCCCTTTGCCAGTAACTGA

Protein sequence

MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Homology
[Close]
BLAST of Carg20136 vs. NCBI nr
Match: XP_022979916.1 (uncharacterized protein LOC111479465 isoform X2 [Cucurbita maxima] >XP_023526477.1 uncharacterized protein LOC111789966 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7018640.1 hypothetical protein SDJN02_20510 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461.8 bits (1187), Expect = 3.3e-126
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60
           MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS
Sbjct: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60

Query: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120
           MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL
Sbjct: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120

Query: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180
           FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD
Sbjct: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180

Query: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 226

[Close]
BLAST of Carg20136 vs. NCBI nr
Match: XP_022979915.1 (uncharacterized protein LOC111479465 isoform X1 [Cucurbita maxima] >XP_023526476.1 uncharacterized protein LOC111789966 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.3 bits (1157), Expect = 9.9e-123
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0 

Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS
Sbjct: 19  QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 79  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 199 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 239

[Close]
BLAST of Carg20136 vs. NCBI nr
Match: KAG6582240.1 (CASP-like protein 1D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 450.3 bits (1157), Expect = 9.9e-123
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0 

Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS
Sbjct: 216 QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 275

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 276 FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 335

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 336 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 395

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 396 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 436

[Close]
BLAST of Carg20136 vs. NCBI nr
Match: XP_022955428.1 (uncharacterized protein LOC111457456 isoform X2 [Cucurbita moschata])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0 

Query: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60
           MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVAS   SSSSTLAQSPIS
Sbjct: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASV--SSSSTLAQSPIS 60

Query: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120
           MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL
Sbjct: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120

Query: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180
           FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD
Sbjct: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180

Query: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           EQQTRRVSLAAL+AEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 181 EQQTRRVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 224

[Close]
BLAST of Carg20136 vs. NCBI nr
Match: XP_022955427.1 (uncharacterized protein LOC111457456 isoform X1 [Cucurbita moschata])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0 

Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVAS   SSSSTLAQSPISMGWKS
Sbjct: 19  QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASV--SSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 79  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAAL+AEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 199 RVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 237

[Close]
BLAST of Carg20136 vs. ExPASy TrEMBL
Match: A0A6J1IS41 (uncharacterized protein LOC111479465 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479465 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.6e-126
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60
           MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS
Sbjct: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60

Query: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120
           MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL
Sbjct: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120

Query: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180
           FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD
Sbjct: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180

Query: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 226

[Close]
BLAST of Carg20136 vs. ExPASy TrEMBL
Match: A0A6J1IUP6 (uncharacterized protein LOC111479465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479465 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 4.8e-123
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0 

Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS
Sbjct: 19  QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 79  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 199 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 239

[Close]
BLAST of Carg20136 vs. ExPASy TrEMBL
Match: A0A6J1GTX1 (uncharacterized protein LOC111457456 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457456 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.3e-123
Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0 

Query: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60
           MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVAS   SSSSTLAQSPIS
Sbjct: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASV--SSSSTLAQSPIS 60

Query: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120
           MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL
Sbjct: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120

Query: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180
           FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD
Sbjct: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180

Query: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           EQQTRRVSLAAL+AEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 181 EQQTRRVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 224

[Close]
BLAST of Carg20136 vs. ExPASy TrEMBL
Match: A0A6J1GTL4 (uncharacterized protein LOC111457456 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457456 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0 

Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVAS   SSSSTLAQSPISMGWKS
Sbjct: 19  QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASV--SSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 79  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAAL+AEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 199 RVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 237

[Close]
BLAST of Carg20136 vs. ExPASy TrEMBL
Match: A0A5A7U795 (F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00440 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 184/221 (83.26%), Postives = 200/221 (90.50%), Query Frame = 0 

Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           + S+ICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     GSSSSTLAQSPISMGWKS
Sbjct: 19  QVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYIN-----GSSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEI  RAQAAVKF+EQ SPS+PIEGGDYLRTI GLWDLKLSF+DAQMVLFKP L
Sbjct: 79  FYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLSFVDAQMVLFKPQL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYC+ WLQVP N+I+EAL+RCKI+ER + VKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 199 RVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 234

[Close]
BLAST of Carg20136 vs. TAIR 10
Match: AT4G15563.1 (unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-28
Identity = 61/149 (40.94%), Postives = 93/149 (62.42%), Query Frame = 0 

Query: 70  RHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHLNELL 129
           +H E++ RA   +K++ +   +  +E G YL  +  +  ++  F D ++  FKP+L+ LL
Sbjct: 2   QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLL 61

Query: 130 NLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTRRVSL 189
           NL+GL YC   L+    ++++ L +C ISE+ V VKW  LGRW  G RMRD+  +R+VSL
Sbjct: 62  NLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSL 121

Query: 190 AALVAEEGEDVLEVLSRGAVNEVLRVQVS 219
             +V  + E VL VL RG V+EVLRV +S
Sbjct: 122 VDVVTGKEETVLRVLQRGVVHEVLRVCIS 150

The following BLAST results are available for this feature:
BLAST of Carg20136 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022979916.13.3e-126100.00uncharacterized protein LOC111479465 isoform X2 [Cucurbita maxima] >XP_023526477... [more]
XP_022979915.19.9e-12399.55uncharacterized protein LOC111479465 isoform X1 [Cucurbita maxima] >XP_023526476... [more]
KAG6582240.19.9e-12399.55CASP-like protein 1D1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022955428.11.3e-12298.23uncharacterized protein LOC111457456 isoform X2 [Cucurbita moschata][more]
XP_022955427.13.9e-11997.74uncharacterized protein LOC111457456 isoform X1 [Cucurbita moschata][more]
BLAST of Carg20136 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg20136 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IS411.6e-126100.00uncharacterized protein LOC111479465 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IUP64.8e-12399.55uncharacterized protein LOC111479465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GTX16.3e-12398.23uncharacterized protein LOC111457456 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GTL41.9e-11997.74uncharacterized protein LOC111457456 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5A7U7951.2e-10283.26F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of Carg20136 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G15563.17.5e-2840.94unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039588F-box only protein 4PANTHERPTHR16008F-BOX ONLY PROTEIN 4coord: 7..221
NoneNo IPR availablePANTHERPTHR16008:SF4F-BOX ONLY PROTEIN 4coord: 7..221
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 7..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20136-RACarg20136-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0005515 protein binding