Carg20135 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20135
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CASP-like protein
Location	Carg_Chr14: 12246212 .. 12247746 (+)
RNA-Seq Expression	Carg20135
Synteny	Carg20135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATATATATACACAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATGTGAGTTTTTTTTTTTCCTATTTAAATAAAAATTTAAATATTTGAAATTATATAAACCTAATATGATATTTATCAAAAACTAAAATAATATATTAAGCATATATATATATATTAAAGTAATTTCTTGCTCGAGCTCGAAAATAAAAACTCCAAATAAATTAGAAAATAAATAAATATATATTGAAAAAATTAATTTTGAAATAAAAAAGCGACAATATAATCACTTAGAATAATATTGAGGTAATTGATTGTTTATTATATGTCATTTGGACATCTAATAATATAAATAAAGACTCTCGAGAAGTTGTATGGTGACGAAAATAGTTAGACCTCTTTATAATCCAACTCGATGAACCATATATTATAATCACAAAAATTATAAAAAAAATACTAATAAAATTTAAAATTAATCTATTAAAGACATATTTATATTCATGAAAATTATTATTATTATTTATTTAATTTTGTTAAAAAATTAACTTAAATAACTAAATATAAGATTTTTTTTTAATGTTCGACCAATATTATTTATAATTATTCAGCTTGATATTCATTTATTTATTTATTGATTTTGTCATTTTGAGTTAATTTATTTAATTAAATTGTTTTAAATGCATTTAAAAACTGAAATTAATGATACGGAATTAAAATATACAGATATTTCGTGGCTGCATTATCGGTGGCTGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGGTAATTTCTCTCTCTACTATCACCGTTAAGTAACGGCGGTTAATTTAAATATTTTAATATCACTATTAATTATCACTCTAATTTTAAAACTAATATATTATCACTTTAATGTATAAATTTATTTGGAAATTGTGTGCAGTTGATATTGGGGGTGGTAGCCTCAGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACTCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGTTGTTATTTTTTTATAAAATATTGTGTTAATTATAGTTCATTTA

mRNA sequence

ATGACTATATATATACACAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGGTGGCTGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGTTGATATTGGGGGTGGTAGCCTCAGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACTCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGTTGTTATTTTTTTATAAAATATTGTGTTAATTATAGTTCATTTA

Coding sequence (CDS)

ATGACTATATATATACACAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGGTGGCTGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGTTGATATTGGGGGTGGTAGCCTCAGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAG

Protein sequence

MTIYIHNTPKFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK

Homology

[Close]

BLAST of Carg20135 vs. NCBI nr
Match: KAG7018639.1 (hypothetical protein SDJN02_20509, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.0 bits (868), Expect = 2.6e-89
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTIYIHNTPKFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSP 60
           MTIYIHNTPKFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSP
Sbjct: 1   MTIYIHNTPKFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSP 60

Query: 61  AFIYFVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGG 120
           AFIYFVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGG
Sbjct: 61  AFIYFVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGG 120

Query: 121 VAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           VAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 121 VAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 179

[Close]

BLAST of Carg20135 vs. NCBI nr
Match: XP_022955971.1 (CASP-like protein 1D1 [Cucurbita moschata])

HSP 1 Score: 298.1 bits (762), Expect = 5.0e-77
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALS+AALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSLAALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 196

[Close]

BLAST of Carg20135 vs. NCBI nr
Match: XP_022979933.1 (CASP-like protein 1D1 [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 6.5e-77
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSV ALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVTALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 196

[Close]

BLAST of Carg20135 vs. NCBI nr
Match: XP_023528553.1 (CASP-like protein 1D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 4.7e-75
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAV DTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVCDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASL ASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLVASVVLVLLIWISIISLHARIRK 196

[Close]

BLAST of Carg20135 vs. NCBI nr
Match: KAG6582240.1 (CASP-like protein 1D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVL 163
           AFDKFCRHIGGALAASLFASVVL
Sbjct: 157 AFDKFCRHIGGALAASLFASVVL 179

[Close]

BLAST of Carg20135 vs. ExPASy Swiss-Prot
Match: B9HMP5 (CASP-like protein 1D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820933 PE=3 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 7.1e-50
Identity = 97/160 (60.62%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LLFAA+V++VVV+VT+KQT +  + G+P   P++AKF  SPAF+YF++ALSVA LYG++T
Sbjct: 37  LLFAASVTAVVVMVTAKQTKIVPVPGLPISVPLEAKFSDSPAFLYFISALSVAGLYGILT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LA++S++ KP  +T+FLLHFA+ D L+LG+VASATGAAGGVAY+GLKGNSHVRW KVC 
Sbjct: 97  TLAAISIVLKPAYATRFLLHFALLDVLMLGIVASATGAAGGVAYVGLKGNSHVRWGKVCN 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            +DKFC+H+G ++A +LFASV+LVLL  +S+ S++ +I K
Sbjct: 157 VYDKFCQHVGSSIAVALFASVLLVLLTMLSVFSIYRKIPK 196

[Close]

BLAST of Carg20135 vs. ExPASy Swiss-Prot
Match: B9RT03 (CASP-like protein 1D1 OS=Ricinus communis OX=3988 GN=RCOM_0679870 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-49
Identity = 101/160 (63.12%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 21  LFAAAVSSVVVIVTSKQTVVGKLRGVPP-GFPVQAKFDHSPAFIYFVAALSVAALYGLVT 80
           LFA  ++++VV+ T+KQT +  + GVP    PV+AKF+HSPAFIYFVAALSVA LY ++T
Sbjct: 40  LFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIIT 99

Query: 81  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 140
            LAS+ VIAKP  +TKFL ++A+WD L+LG+VA+ATGAAGGVAYIGLKGNSH RW K+C 
Sbjct: 100 TLASLGVIAKPIYATKFLFYYALWDVLMLGIVAAATGAAGGVAYIGLKGNSHTRWTKICN 159

Query: 141 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            +D FC+H+G ALA SL ASVVLVLLI +S+ SL++R+R+
Sbjct: 160 VYDTFCKHVGSALAISLAASVVLVLLIMLSVCSLYSRVRR 199

[Close]

BLAST of Carg20135 vs. ExPASy Swiss-Prot
Match: A7NW79 (CASP-like protein 1D1 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01830 PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-49
Identity = 99/160 (61.88%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LL  +AV+SVVV+VTS QT +  + GVP     +AKF +SPAFIYFVAALSV  LY ++T
Sbjct: 49  LLLGSAVASVVVMVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAALSVVGLYSIIT 108

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LAS   I+KP+ STK +LH A+WD L+LG+ ASATG AGGVAY+GLKGNSHV W+KVC 
Sbjct: 109 TLASFIFISKPSCSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGNSHVGWNKVCN 168

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            +DKFCRH+GG++A +LFAS++LVLL+W+S+ +L++RIRK
Sbjct: 169 TYDKFCRHVGGSIAVALFASILLVLLVWLSLFTLYSRIRK 208

[Close]

BLAST of Carg20135 vs. ExPASy Swiss-Prot
Match: C6SVQ5 (CASP-like protein 1D2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.1e-46
Identity = 100/171 (58.48%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 10  KFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAAL 69
           KF V+L +  LLFAA++ +VVVIVT+ QT V +   VP   P  AKF +SPAF+YFVAAL
Sbjct: 28  KFDVILRF--LLFAASLVAVVVIVTANQTEVIR---VPQPVPWPAKFRYSPAFVYFVAAL 87

Query: 70  SVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGN 129
           SV  LY ++T LAS+    KP L TK LL+F +WD LILG++ASATG AGGVAY+GLKGN
Sbjct: 88  SVTGLYSIITTLASLLASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGN 147

Query: 130 SH-VRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            H V W+K+C+ +DKFCRH+G ++A +LF SVV VLLIW+S  S+H+R+ K
Sbjct: 148 RHVVGWNKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRVPK 193

[Close]

BLAST of Carg20135 vs. ExPASy Swiss-Prot
Match: C6SXZ3 (CASP-like protein 1D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 97/171 (56.73%), Postives = 127/171 (74.27%), Query Frame = 0


Query: 10  KFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAAL 69
           KF V+L ++  LFAA++ +VVVIVT  QT V     VP   P  AKF ++PAF+YFVAAL
Sbjct: 28  KFDVILRFV--LFAASLVAVVVIVTGNQTEVIL---VPQPVPWPAKFRYTPAFVYFVAAL 87

Query: 70  SVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGN 129
           SV  LY ++T LAS+    KP L TK L +F +WD LILG++ASATG AGGVAY+GLKGN
Sbjct: 88  SVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATGTAGGVAYLGLKGN 147

Query: 130 SH-VRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           SH V W+K+C+ +DKFCRH+G ++A +LF S+V VLLIW+S  S+H+R+ K
Sbjct: 148 SHVVGWNKICHVYDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIHSRVPK 193

[Close]

BLAST of Carg20135 vs. ExPASy TrEMBL
Match: A0A6J1GVA6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457806 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALS+AALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSLAALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 196

[Close]

BLAST of Carg20135 vs. ExPASy TrEMBL
Match: A0A6J1IXR1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479475 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSV ALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVTALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 196

[Close]

BLAST of Carg20135 vs. ExPASy TrEMBL
Match: A0A6J1C942 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009351 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 137/160 (85.62%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAV++VVV VTSKQTVV KLRGVPPGFPVQAKFD SPAFIYFV ALSV ALY L+T
Sbjct: 35  VLFAAAVATVVVTVTSKQTVVNKLRGVPPGFPVQAKFDDSPAFIYFVTALSVTALYSLIT 94

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVI+ PNLS KFLLHFA  D LILGVVASATG AGGVAYIGLKGNSHV+W+KVCY
Sbjct: 95  ALASVSVISNPNLSAKFLLHFAFLDALILGVVASATGTAGGVAYIGLKGNSHVQWNKVCY 154

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVL LLIW+S+ SLHARIRK
Sbjct: 155 AFDKFCRHIGGALAASLFASVVLALLIWLSVFSLHARIRK 194

[Close]

BLAST of Carg20135 vs. ExPASy TrEMBL
Match: A0A0A0L552 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151480 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.3e-66
Identity = 138/167 (82.63%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 13  VVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVA 72
           VVL ++  +FAAAVSSVVV+VTSKQTVV KLRGVPPGFPV+AKFD SPAF YFVAALSVA
Sbjct: 31  VVLRFV--VFAAAVSSVVVMVTSKQTVVNKLRGVPPGFPVEAKFDDSPAFRYFVAALSVA 90

Query: 73  ALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHV 132
           A Y LVT L+S+ VIAKPN  TK LLH+A+WDT ILGVVASATGAAGGVAYIGLKGN+HV
Sbjct: 91  AFYSLVTGLSSLFVIAKPNCHTKSLLHYAIWDTFILGVVASATGAAGGVAYIGLKGNTHV 150

Query: 133 RWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           RWDKVCYAFDKFCRH+G +LA SLFASVV+VLLIWISIISLHARIRK
Sbjct: 151 RWDKVCYAFDKFCRHVGASLATSLFASVVMVLLIWISIISLHARIRK 195

[Close]

BLAST of Carg20135 vs. ExPASy TrEMBL
Match: A0A1S3AXZ8 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483798 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.1e-65
Identity = 138/167 (82.63%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 13  VVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVA 72
           VVL ++  +FAAAVSS+VV+VTSKQTVV KLRGVPPG PVQAKFDHSPAF YFVAALS+ 
Sbjct: 34  VVLRFV--VFAAAVSSMVVMVTSKQTVVNKLRGVPPGIPVQAKFDHSPAFSYFVAALSLT 93

Query: 73  ALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHV 132
           A Y L T LASV VIAKPN STK LLH+A++DTLILGVVASATGAAGGVAYIGLKGN HV
Sbjct: 94  ASYSLTTGLASVLVIAKPNCSTKCLLHYAIFDTLILGVVASATGAAGGVAYIGLKGNKHV 153

Query: 133 RWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           +WDKVCYAFDKFCRH+GGALA SLFASVV+V LIWISIISLHARIRK
Sbjct: 154 QWDKVCYAFDKFCRHVGGALATSLFASVVMVFLIWISIISLHARIRK 198

[Close]

BLAST of Carg20135 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 165.6 bits (418), Expect = 3.6e-41
Identity = 93/166 (56.02%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 13  VVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVA 72
           VVL ++  LFAA ++S+VV+VTSKQT    L G P   P  A+F +SPA IYFV ALSVA
Sbjct: 31  VVLRFV--LFAATLTSIVVMVTSKQTKNIFLPGTPIRIPA-AEFTNSPALIYFVVALSVA 90

Query: 73  ALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHV 132
             Y +V+   +VS   K + S   LL+ A+ D +++G+VASATGA GGVAY+GLKGN  V
Sbjct: 91  CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 150

Query: 133 RWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIR 179
           RW K+C+ +DKFCRH+GGA+A SLFASVVL+LL  IS++SL+ +IR
Sbjct: 151 RWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR 193

[Close]

BLAST of Carg20135 vs. TAIR 10
Match: AT3G06390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-36
Identity = 79/152 (51.97%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LLF+A +++++V+VTS QT + +L GV    PV A+F+ SPAFIYFV AL VA+ Y L++
Sbjct: 44  LLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALIS 103

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            L S+S++ KP  + +F ++ A  D ++LG++ASATG AGGVAYI LKGN  V W+K+C 
Sbjct: 104 TLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICN 163

Query: 140 AFDKFCRHIGGALAASLFAS-VVLVLLIWISI 171
            +DKFCR+I  +LA SLFAS ++LVL IW ++
Sbjct: 164 VYDKFCRYIATSLALSLFASLLLLVLSIWSAL 195

[Close]

BLAST of Carg20135 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17
Identity = 59/164 (35.98%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 13  VVLNYINLLFAAAVSSVVVIVTSKQT---VVGKLRGVPPGFPVQAKFDHSPAFIYFVAAL 72
           ++L    L F+A +S+ +V+  +K+T   +VGK+   P      AKFDH+PAF++FV A 
Sbjct: 18  ILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVAN 77

Query: 73  SVAALYGLVTALASVSVIAKPNLSTKF-LLHFAVWDTLILGVVASATGAAGGVAYIGLKG 132
           ++ + + L+  + ++ +       T F LL  A+ D L + ++++A  AA  +A +G  G
Sbjct: 78  AMVSFHNLL--MIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNG 137

Query: 133 NSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIIS 173
           N H RWDK+C  F  +C H  GAL A+ FA V+L+L+I  + IS
Sbjct: 138 NKHARWDKICDRFATYCDHGAGALIAA-FAGVILMLIISAASIS 178

[Close]

BLAST of Carg20135 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14
Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 8   TPKFPVVLNYINLLFAAAVSSVVVIVTSKQT---VVGKLRGVPPGFPVQAKFDHSPAFIY 67
           T  + ++L      F A +++ +V+  +K+T   VV  +  VP    + AKF H+PAF++
Sbjct: 13  TKSWKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVF 72

Query: 68  FVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYI 127
           FV A  + + + L+  +  +    K       LL  A+ D L   +V++A  AA  VA +
Sbjct: 73  FVIANVMVSFHNLLMIVVQI-FSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAEL 132

Query: 128 GLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLI 167
           G  GN H +W+KVC  F  +C H  GA+ A+ FA V+L+LL+
Sbjct: 133 GKNGNKHAKWNKVCDRFTTYCDHGAGAIIAA-FAGVILMLLV 172

[Close]

BLAST of Carg20135 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 49/158 (31.01%), Postives = 86/158 (54.43%), Query Frame = 0


Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQ----AKFDHSPAFIYFVAALSVAALY 79
           L     + +  V+  +KQT V  ++ +P   P+     AK  +  AF+Y ++A ++A  Y
Sbjct: 34  LALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIACGY 93

Query: 80  GLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWD 139
             ++ +  + +I+K   S   L+   + D +++ ++ S+TGAAG +  +G  GN HV W 
Sbjct: 94  TAISIV--IVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWK 153

Query: 140 KVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISL 174
           KVC  F KFC     ++A +L ASVV +LL+ +  + L
Sbjct: 154 KVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

The following BLAST results are available for this feature:

BLAST of Carg20135 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018639.1	2.6e-89	100.00	hypothetical protein SDJN02_20509, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022955971.1	5.0e-77	98.75	CASP-like protein 1D1 [Cucurbita moschata]	[more]
XP_022979933.1	6.5e-77	98.75	CASP-like protein 1D1 [Cucurbita maxima]	[more]
XP_023528553.1	4.7e-75	98.13	CASP-like protein 1D1 [Cucurbita pepo subsp. pepo]	[more]
KAG6582240.1	1.1e-68	99.30	CASP-like protein 1D1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg20135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9HMP5	7.1e-50	60.63	CASP-like protein 1D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820933 PE=3 S...	[more]
B9RT03	1.2e-49	63.13	CASP-like protein 1D1 OS=Ricinus communis OX=3988 GN=RCOM_0679870 PE=2 SV=1	[more]
A7NW79	3.5e-49	61.88	CASP-like protein 1D1 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01830 PE=2 SV=2	[more]
C6SVQ5	8.1e-46	58.48	CASP-like protein 1D2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6SXZ3	2.6e-44	56.73	CASP-like protein 1D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Carg20135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVA6	2.4e-77	98.75	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457806 PE=3 SV=1	[more]
A0A6J1IXR1	3.2e-77	98.75	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479475 PE=3 SV=1	[more]
A0A6J1C942	5.6e-66	85.63	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009351 PE=3 SV=1	[more]
A0A0A0L552	7.3e-66	82.63	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151480 PE=3 SV=1	[more]
A0A1S3AXZ8	2.1e-65	82.63	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483798 PE=3 SV=1	[more]

BLAST of Carg20135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15610.1	3.6e-41	56.02	Uncharacterised protein family (UPF0497)	[more]
AT3G06390.1	2.7e-36	51.97	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.2e-17	35.98	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	2.9e-14	33.33	Uncharacterised protein family (UPF0497)	[more]
AT4G15630.1	1.1e-13	31.01	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 20..172 e-value: 2.4E-41 score: 139.1
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 21..161 e-value: 7.3E-33 score: 113.5
None	No IPR available	PANTHER	PTHR11615:SF224	CASP-LIKE PROTEIN 1D1	coord: 20..177
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 20..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20135-RA	Carg20135-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding