Carg19696 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19696
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SOB FIVE-LIKE 6-like isoform X2
Location	Carg_Chr16: 1716470 .. 1717963 (-)
RNA-Seq Expression	Carg19696
Synteny	Carg19696

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTGGCTTTCTCTCTGCTACATGCGATCATCTAACGCTATAAACCCACCACACCCATCTGCCACTTTTCATTTTGATTCATTCATTTCACTTCCCCACACACATTCAACTTGGAGGGTCAGACATAACCCAGTTTTTTGTTTTGGGATTTGAGTTCAATTTTACACAAATTTGGCGAAAAATCTTGATAGATGTAAATAGATCATTGGTTGCTTGTTGAAATCGTTTGTGGAAAGTTCGTATTCTCTGTTTTTTTTGGGTTCCCATTCTGATCTGGGCTCTGTTTTCTTCTTGAATTTGCATTGCACACAACCTGTTTGATAATTTGCCTGAGAGAAAAAAAGGGTTGGGGAATATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTGTAAGTCTCCAACTCAATCTCTTTTAGCCCATTTTTAGCTTTGTTCTACAACGATTACACATTTTGGCCAATTGGGTACTCATTAAAGTTAGCTTCTTTCAAATCTTCAGAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGAGCATAAGCTCTCGCCTTTGCTTTGGGTTTCTCCAAAAGCCAATGTATTACTTACTTGTTCATTCCTGAACAGCCATCACCAAGACAAATGCACATGTATTGACATTGTTTGTTGCTGTTGATGCAGGAAAGATCGGCCTGTACAGACCATTTTGGGTTCCTTCAAGCTTCTCTATCAGGAAATAGATTGCAGAAGAACCAGTTAAGCTACTTCCTCTGTTTTTGGGTAATCACTGGGCTTGTTTTTGAGCATTTTTGAACTGGATTGTTCTTATTCTGGTTCTTTAACAGGTGGTTTGAAGGCGAAGGAGGAGGGATAGGGATGAGATGAGATAAGTGGCCTTATTTTTGCACCACTTTCTTCTTAAAAATGCGTGGGAAATGGATCTGCTGAAGAGATGGGCTTTGTTTCCCTGTTTTTTTGTTCATTTCTTTCCTTTTTGTAACGATCAATGCAATGGGAACCATTCGTGGTGAGAGATTTGTGAATTGGAAACAAATCTGAGTAATTTTTAGAACAAAATCACAAGACCCACTAACTTTCATC

mRNA sequence

TTCTGGCTTTCTCTCTGCTACATGCGATCATCTAACGCTATAAACCCACCACACCCATCTGCCACTTTTCATTTTGATTCATTCATTTCACTTCCCCACACACATTCAACTTGGAGGGTCAGACATAACCCAGTTTTTTGTTTTGGGATTTGAGTTCAATTTTACACAAATTTGGCGAAAAATCTTGATAGATGTAAATAGATCATTGGTTGCTTGTTGAAATCGTTTGTGGAAAGTTCGTATTCTCTGTTTTTTTTGGGTTCCCATTCTGATCTGGGCTCTGTTTTCTTCTTGAATTTGCATTGCACACAACCTGTTTGATAATTTGCCTGAGAGAAAAAAAGGGTTGGGGAATATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGAGCATAAGCTCTCGCCTTTGCTTTGGGTTTCTCCAAAAGCCAATGTATTACTTACTTGTTCATTCCTGAACAGCCATCACCAAGACAAATGCACATGTATTGACATTGTTTGTTGCTGTTGATGCAGGAAAGATCGGCCTGTACAGACCATTTTGGGTTCCTTCAAGCTTCTCTATCAGGAAATAGATTGCAGAAGAACCAGTTAAGCTACTTCCTCTGTTTTTGGGTGGTTTGAAGGCGAAGGAGGAGGGATAGGGATGAGATGAGATAAGTGGCCTTATTTTTGCACCACTTTCTTCTTAAAAATGCGTGGGAAATGGATCTGCTGAAGAGATGGGCTTTGTTTCCCTGTTTTTTTGTTCATTTCTTTCCTTTTTGTAACGATCAATGCAATGGGAACCATTCGTGGTGAGAGATTTGTGAATTGGAAACAAATCTGAGTAATTTTTAGAACAAAATCACAAGACCCACTAACTTTCATC

Coding sequence (CDS)

ATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGA

Protein sequence

MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSFSKIVRHCPL

Homology

[Close]

BLAST of Carg19696 vs. NCBI nr
Match: KAG7014933.1 (hypothetical protein SDJN02_22564 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.2 bits (822), Expect = 4.9e-84
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60

Query: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120
           SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA
Sbjct: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120

Query: 121 NKFTNQASMESFLGFSQTSHFEVLDYFTLSFSKIVRHCPL 161
           NKFTNQASMESFLGFSQTSHFEVLDYFTLSFSKIVRHCPL
Sbjct: 121 NKFTNQASMESFLGFSQTSHFEVLDYFTLSFSKIVRHCPL 160

[Close]

BLAST of Carg19696 vs. NCBI nr
Match: KAG6576907.1 (hypothetical protein SDJN03_24481, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.3 bits (726), Expect = 6.7e-73
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60

Query: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120
           SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA
Sbjct: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120

Query: 121 NKFTNQASMESFLGFSQTSHFE 143
           NKFTNQASMESFLGFSQTSHFE
Sbjct: 121 NKFTNQASMESFLGFSQTSHFE 142

[Close]

BLAST of Carg19696 vs. NCBI nr
Match: XP_023552790.1 (uncharacterized protein LOC111810322 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 7.4e-72
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWK KGSEEEEEEEDLSMVSDA
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKVKGSEEEEEEEDLSMVSDA 60

Query: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120
           SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA
Sbjct: 61  SSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTA 120

Query: 121 NKFTNQASMESFLGFSQTSHFE 143
           NKFT+QASMESFLGFSQTSHFE
Sbjct: 121 NKFTHQASMESFLGFSQTSHFE 142

[Close]

BLAST of Carg19696 vs. NCBI nr
Match: XP_022922888.1 (uncharacterized protein LOC111430730 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 4.8e-71
Identity = 143/153 (93.46%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS--EEEEEEEDLSMVS 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS  EEEEEEEDLSMVS
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEEEDLSMVS 60

Query: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
           TANKFTNQASMESFLGFSQT+HFE +   T  F
Sbjct: 121 TANKFTNQASMESFLGFSQTNHFEEISACTDHF 153

[Close]

BLAST of Carg19696 vs. NCBI nr
Match: XP_022985337.1 (uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima] >XP_022985338.1 uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS--EEEEEEEDLSMVS 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS  EEEEEEEDLSMVS
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEEEDLSMVS 60

Query: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           DASSGPPHFIEDEACSQ+ASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  DASSGPPHFIEDEACSQDASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFE 143
           TANKFTNQASM+SFLGFSQTSHFE
Sbjct: 121 TANKFTNQASMKSFLGFSQTSHFE 144

[Close]

BLAST of Carg19696 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-12
Identity = 62/153 (40.52%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 3   LLGSECSSGCESGWTLYLEQS--------FRSQGCLDHIVGGEEYWKAK--GSEEEEEEE 62
           +LGS  SSGCESGWTLYL+QS        FR     D     ++ W       EEEEEE+
Sbjct: 1   MLGS--SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEED 60

Query: 63  DLSMVSDASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTAS 122
           DLSM+SDASSGP +  E+++      K   +G +K  K+  ++ +   E  +S LDDTAS
Sbjct: 61  DLSMISDASSGPRNISEEDS----VKKINIVGLKKQCKR--EKKRRDYEKMNSLLDDTAS 120

Query: 123 SPALNYT--------ANKFTNQASMESFLGFSQ 138
           SP  N+          NK   Q   ES L +SQ
Sbjct: 121 SPLFNFPHMLQKSVGGNKI-EQTFPESTLDYSQ 144

[Close]

BLAST of Carg19696 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07
Identity = 47/120 (39.17%), Postives = 63/120 (52.50%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60
           MD    + S   +SGWT+YL  S  S   L H     +Y    G  ++E +ED SMVSDA
Sbjct: 1   MDFSDLDYSDAGDSGWTMYLGHS--SSVSLHHF----DY--HNGETKQEHDEDSSMVSDA 60

Query: 61  SSGPPHFIED-------EACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASS 114
           SSGPP++ E+       +  +Q   KS +  K K KK ++ E Q   E  +S  DDTASS
Sbjct: 61  SSGPPYYCEETVHEDHLQQNTQYWCKSKSKNKNKNKK-KVHEEQGYSERFNSSFDDTASS 111

[Close]

BLAST of Carg19696 vs. ExPASy TrEMBL
Match: A0A6J1E812 (uncharacterized protein LOC111430730 OS=Cucurbita moschata OX=3662 GN=LOC111430730 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 143/153 (93.46%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS--EEEEEEEDLSMVS 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS  EEEEEEEDLSMVS
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEEEDLSMVS 60

Query: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
           TANKFTNQASMESFLGFSQT+HFE +   T  F
Sbjct: 121 TANKFTNQASMESFLGFSQTNHFEEISACTDHF 153

[Close]

BLAST of Carg19696 vs. ExPASy TrEMBL
Match: A0A6J1J4L5 (uncharacterized protein LOC111483377 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483377 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.7e-71
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS--EEEEEEEDLSMVS 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS  EEEEEEEDLSMVS
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEEEDLSMVS 60

Query: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           DASSGPPHFIEDEACSQ+ASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  DASSGPPHFIEDEACSQDASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFE 143
           TANKFTNQASM+SFLGFSQTSHFE
Sbjct: 121 TANKFTNQASMKSFLGFSQTSHFE 144

[Close]

BLAST of Carg19696 vs. ExPASy TrEMBL
Match: A0A6J1JD05 (uncharacterized protein LOC111483377 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483377 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.7e-71
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS--EEEEEEEDLSMVS 60
           MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGS  EEEEEEEDLSMVS
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEEEDLSMVS 60

Query: 61  DASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120
           DASSGPPHFIEDEACSQ+ASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY
Sbjct: 61  DASSGPPHFIEDEACSQDASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNY 120

Query: 121 TANKFTNQASMESFLGFSQTSHFE 143
           TANKFTNQASM+SFLGFSQTSHFE
Sbjct: 121 TANKFTNQASMKSFLGFSQTSHFE 144

[Close]

BLAST of Carg19696 vs. ExPASy TrEMBL
Match: A0A0A0KV02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000650 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 126/169 (74.56%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIV---GG---EEYWKAKGSEEEEEE--- 60
           MDLLGSECSSGCESGWTLYLEQSF S G   HIV   GG   E YWK KG+EEE+EE   
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFLSNGASHHIVAQEGGFCTEGYWKPKGTEEEDEEEEE 60

Query: 61  --EDLSMVSDASSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEP 120
             EDLSMVSDASSGPPHFIEDEACS E        SKSATLGKRKGKKQRI+E+QCQ EP
Sbjct: 61  VVEDLSMVSDASSGPPHFIEDEACSHEDDAHFSDVSKSATLGKRKGKKQRIKEYQCQKEP 120

Query: 121 SSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
            SSFLDDTASSPALN+TAN FTNQASMESFLG SQT+HFE    FT  F
Sbjct: 121 -SSFLDDTASSPALNFTANNFTNQASMESFLGLSQTNHFEERSAFTEHF 168

[Close]

BLAST of Carg19696 vs. ExPASy TrEMBL
Match: A0A6J1D7H0 (uncharacterized protein LOC111017634 OS=Momordica charantia OX=3673 GN=LOC111017634 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 123/165 (74.55%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGE-----EYWKAKGSEEEEEE--ED 60
           MDLLGSECSSGCESGWTLYLEQSF S G  D +VGGE      YWKAK SEEEEEE  ED
Sbjct: 1   MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEEVED 60

Query: 61  LSMVSDASSGPPHFIEDEACSQE-------ASKSATLGKRKGKKQRIQEHQCQGEPSSSF 120
           LSMVSDASSGPPHFIED+ACS E       ASKSATLGKRKGKKQ+I+E+Q   EPSSSF
Sbjct: 61  LSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRKGKKQKIKEYQFH-EPSSSF 120

Query: 121 LDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSF 152
           LDDTASSPALN+T N FTNQASM+SF+ FSQTSHFE    FT  F
Sbjct: 121 LDDTASSPALNFTPNNFTNQASMDSFMDFSQTSHFEERSAFTDHF 164

[Close]

BLAST of Carg19696 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-13
Identity = 62/153 (40.52%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 3   LLGSECSSGCESGWTLYLEQS--------FRSQGCLDHIVGGEEYWKAK--GSEEEEEEE 62
           +LGS  SSGCESGWTLYL+QS        FR     D     ++ W       EEEEEE+
Sbjct: 1   MLGS--SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEED 60

Query: 63  DLSMVSDASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTAS 122
           DLSM+SDASSGP +  E+++      K   +G +K  K+  ++ +   E  +S LDDTAS
Sbjct: 61  DLSMISDASSGPRNISEEDS----VKKINIVGLKKQCKR--EKKRRDYEKMNSLLDDTAS 120

Query: 123 SPALNYT--------ANKFTNQASMESFLGFSQ 138
           SP  N+          NK   Q   ES L +SQ
Sbjct: 121 SPLFNFPHMLQKSVGGNKI-EQTFPESTLDYSQ 144

[Close]

BLAST of Carg19696 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 47/120 (39.17%), Postives = 63/120 (52.50%), Query Frame = 0


Query: 1   MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDA 60
           MD    + S   +SGWT+YL  S  S   L H     +Y    G  ++E +ED SMVSDA
Sbjct: 1   MDFSDLDYSDAGDSGWTMYLGHS--SSVSLHHF----DY--HNGETKQEHDEDSSMVSDA 60

Query: 61  SSGPPHFIED-------EACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASS 114
           SSGPP++ E+       +  +Q   KS +  K K KK ++ E Q   E  +S  DDTASS
Sbjct: 61  SSGPPYYCEETVHEDHLQQNTQYWCKSKSKNKNKNKK-KVHEEQGYSERFNSSFDDTASS 111

The following BLAST results are available for this feature:

BLAST of Carg19696 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014933.1	4.9e-84	100.00	hypothetical protein SDJN02_22564 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576907.1	6.7e-73	100.00	hypothetical protein SDJN03_24481, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023552790.1	7.4e-72	98.59	uncharacterized protein LOC111810322 [Cucurbita pepo subsp. pepo]	[more]
XP_022922888.1	4.8e-71	93.46	uncharacterized protein LOC111430730 [Cucurbita moschata]	[more]
XP_022985337.1	1.4e-70	97.22	uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima] >XP_022985338...	[more]

BLAST of Carg19696 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	3.1e-12	40.52	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]
B6IDH8	1.7e-07	39.17	Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1	[more]

BLAST of Carg19696 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E812	2.3e-71	93.46	uncharacterized protein LOC111430730 OS=Cucurbita moschata OX=3662 GN=LOC1114307...	[more]
A0A6J1J4L5	6.7e-71	97.22	uncharacterized protein LOC111483377 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JD05	6.7e-71	97.22	uncharacterized protein LOC111483377 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KV02	1.3e-53	74.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000650 PE=3 SV=1	[more]
A0A6J1D7H0	1.1e-52	74.55	uncharacterized protein LOC111017634 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Carg19696 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	2.2e-13	40.52	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G58460.1	1.2e-08	39.17	unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..110
None	No IPR available	PANTHER	PTHR33347:SF1	OSJNBA0091C07.3 PROTEIN	coord: 1..142
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19696-RA	Carg19696-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process