Carg19313 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19313
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Nuclear transcription factor Y subunit
Location	Carg_Chr03: 9982414 .. 9988812 (-)
RNA-Seq Expression	Carg19313
Synteny	Carg19313

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCTCTTATTGGATTCTGAGCTTCCTCTGTTCGCTCTTCTTAAACTAAGAAATCAAGGCGAAGAAAGACGACGAAAAAACTACAACAAACGCACAGTCTTCAGTTGCAGAAGAAGAAAAAACGAATTTGGGGGTGAGAATTAGCGGACCCCCTTCCACAATTCCCGCTCTCCAGGTGAACTTCGCATTTCGAAACCCTACTTTTTCCCCGCTCTTCCCATCGCTTGCTTGTTCATGAATTTTAGAATCCTTGAACGTCTTTTTTTGTTATCCTTTTCGAATTCTGAGCTTCTAGGTTTCATGGATTTTCTTTGTTGGCTTACCCGATTTGGGCTTTTTATCTGGTCACGGATTCTGTTTGGAAAAAGAATGACGAGAATTGTTGTAGAACACTTCTATTAGATGATTTTTTAGTGGGTTCTTATTTTGAATTGGATGATTGTCTGTTTCGGTTGTGTCGATCGAATTACTTGGAACTAGTTATCAGATTATGATTGTACGGGCTGAAGTGACCGTTCTTCAGTCTAATGTTCATATCTGTATCCTGGTTTGTTGGGCATCAACCAGAAAGCAGAAGTTATTGGAGGACTGAGATGACTCTGTAGTGTCTGGTAAAATGGGGACATAATGAATTTCACATGTTATGTACGTCAATCTCGTCCAACTGGTGTGCACTTACCTTGTCCACTTCTGAAGGACTGAAGTTAAAAAATTTACCTTGTGGACTTGCTGCACGATATTTACTATTCGTTAGGTTGATCTCATCTTGGATTGATTACATATGCTTCATGTACTTTGCATCTAAATGCCATAAGTTGCTAATTGTTTTATTTGAAAATGGAATATTCATATCCAGTTGGTTTTTGGCCTCTCTGGTCTTGCTGCTGTTTTGATACCAGTGTCGTATGAGGGTTACTGGTTCCTGTCACCGTTCACAACTTTAGGGGTTTATGTTTTATTTTTTTTTACAATAATAATAAATAAATAAAATTTATCTATACAAATACTATTTAAAAAAAAATAATAATTTCATTGAACAAGTGAAATTATAAAAGAGTGGAGTGAAGTTAATCCTGAGGATAACAAAAGGTTCTGCTATATGCTACAAGGAGAACTGAAGTTGCAAGAGCTAAAGAAACGTAAATTTTATCCCTGGTAAGGAAACGAGAGGCCCCAAAGGATTTTCTTCTCTTTGTCAAATGGGTGGCCTTCAAGCTCAAAGGAGATGAAAGAAGTTGATGTTGAGAGTGCCAGCCTACTTCCAATTGAAAATATGAATGATGAAGCCCCATCGGCAAAACAAAAGGCGTGGAAGACAAGACTTTGAGATTTGATTTTTTTTTTTCTTGGCTAAGTTCTTGCATTCAGAGAACAAGCTTGGGTTGCGAGTCCAATTTGGAAGCCTTCATTGAACATGAGTATTGATGATTTCATGATTAAACTCCCAAATATAGAACTTGGCTTTCTTGGGATTTTTGGATTGTCAAATAGCTTTGTAAATCTTCTTTCAGCTAATGGAAGTCAAAGATTAGGCTGTTATAAGATTAAACCCTGATTTGTTAACCACTCATCTCAATCTATCTAAAAGAGAGGTAAAGGGAAAATAGGAAAATAATGGAGAGAAGTCCATTCAAGAACCTCCTCATTTGCAACAACATTACAAACAGAGCTCATATTTGCCTCATTTCAAAGAAGACTAAAGTTGCAAGGTTAAATGATTTCAAACCCATTAAGTGTAATTAGCTTTCTTTATAAGATAATCGCCAAATTTCTCAATGAGTGCCTTAAGAAGGTGGTACCTTCTTTATTATGCGACTCTTATTTTGATAAGAAGAAATTTCATTGATAAAGAGAAGATAGTGTAAAATAATATACCATGGACCTCGTGATCTAGGTGCTGGCAATAAATCTAAGCTAGTACCCATGTTATAGTCCCCCTTAAGTCTGTACAGTCTAATGTCTTGTGAGATCCCACGTCGGTTGGAGAGGGGAATAATATCTGCTAGTGGTGGGCATGGGTTGTTACAAATGGTATTAGAGCTAAGCATCGGGCGGTGTGTCAGCGAGGACGTTGGGCCCTGAAGAGGGGTGAATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAATCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTGTTAAAACCTTGAGGTCGATGATGATACGTAACGAGCCAAAGTAGATAATATCTGCTAGCGGTGGGCTTAGACTGTTACATGTCTCTTTTGAGGCATCAAATAAAATTTGAACCATATGAAGTAGATTAGCTAGGCCCTTGTGCACAATGACTTGTCCTAATCAAGTTAAGAAAAGGATTTTAGGTTATAATCACTTTTTCACTTGGATGAAGTTTTTGTTTCTGAAGTTTGTCTTTTTTTGCTTTTTTAAGAGTCGCTCTATTTGGGATTAGGGGATTTCCACTTTTCATGATTATACATGACTGAATGTTCTATTGTGCTTTGTGGGTTTCTTCTTCTTTTAATATAACTTTTAGGACTTCCCATCCTATTTTCTTTGGATATTTTTTTTGTAAATTGTTTGTTCATTATTTTGTTTCTTGCATGTGTATGTATGTATATATTCATGGGTCATCATGTTGGTCAAGAGAACAAACTATTGCCTAGATGTCTTCAAGGTCATGAAATTAACATCTAATGATAACTTAAGAGTCGTGAGATTTTTTATATGAAAATACTTTATGTTCAGATTGCTCCCTTGTTAGATTAGTTAAGATGTACATAAGTTGGCCTATACGCTCATGATTGGGGATAAAAATTGATAAAATGAAAATTCCTTTCACCAATAATGAACTAATGAGTTTTTGAGAATATTACTTAACCTTCAATATTCTGAATTTCTTTTGGTTATGGGTCTAGCTGTGCAATCATCCTGGCATCAACTAGGGCTTTCTTTTGTGTATGCATCCTTTATTGGAGTTAGCTTCAAAATAAAACCACTAGACCCTTGTCACATTATTCCTTGTACCCAATTCCATATCTATCCCAATGTCATAAAGCTGACAGATCCCCTTTCTGAAGTGTCAGGTTTCATTTGGTGTGCACTACCACCCCATGACTTCCTCTGTCCACGATTATTCTGGTAACTCGATCAGTCTCTTGTTCCTATTTTATGATGTTTGGTTTTATATTCTAGTTATATTTCAGTCTATGGTATTTTAATCCGTTTTTAAGTTCTCTATTTTTCTTTGCATCAGCACAAAATAGCATCTGTTCTGCAGTTTGCTTTTTGATCTTTTGGAAAGAGAAAATTAATATGCTTTGCTTTCTTTCTTCACTATGAATTATGTACATGTTTTGCCATGAATTATGTACATGTTATGTTATCTTTTTTAATAGAAACAGAACTTTCATTGAAAGGTCAATAATACAAAAGAATGGGAGGTGAGATAGATATCTGCATATTAGCAACTATCGAAGAGATAGAGTAATTACGAACAGCTTTTTAGGGTACATTTGTCATAAGTACTTTTTTTTAACTCCATTTTAAATTCTAGCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAACACACACATCACCAAAATGCTAGCCCTCTTGAAGAAAAGGATGATTGCATGGCATCTAGACACAGAACTCTTTAAATTTCTTGCGGGGTACAATAGAATGGTAAAACAATTGGAATGACTCCACCAACCTTGAATCAAGATTCTTGTGCTTGGCATCATCATTTGTACTCTTGCACATACTGCATCACCTATTGGATGGAGAAGAATCAAATTCCCTTGCTGAATGCAATCATGAGTTTTTACCGTCATAAAACAAAGACCACCCACCTTTTCAAAGTCTTGCACGATTTAAGGGTTCATGAAATCAGTAGGTCACCAAAAAGATTTCTACAAGAAAAGTCGCCCGATTGATCTATTTTCCACACTTGAGTGTCACTCTGTAGCCAGTCAAACGCCTTAGATGAAATGCATCAAGGCTGTTGACTCTTTCATTTAAGTTTCTCTTCAAGCTCAACAGCTAGAGATATTCCTTTTTTGTCAGCTAATACATAAATTCTCGGAAAAGGATCAAGAGGTCTGCCCCAACACTTAACATAGCTCTATTGGAAGTTGAATTTTGTAATTGAAACTAACGGATTTTGTTGGCTTTCTGTGTTGCATCAAGGAAAAGTAGATCACCCAAAAGAAGACTTGCTATGCTTGCTTGCATTAATTCTCTGCCATATAGCATCTGTTTTGTTCGGATTATAGTCTCCGAAGTGTTCTTTTTGGGACATACAATGGGCTCGTTATGTGAGCTCCGGTTTTCTATGTGATAATATTGTTTTTTGCCTCCATTTTTTAATGCTTATTTCTATATGTACCTTATATTATCAGTTGCTTTTGATTGTCATTTCTGCGGCTCAATTGAGTTTACCGGGCTCAACCAATTACTTTGTGATATTACATTATTGTCTCTGTCCTCCAACGGGGTCTAGATAAATTTTGCCTCTGAAACTGGTTGTCCAGATAATGGCGAGGCTGATGATCAGCAAAAGTACTCTGATTCTCACAATCATTCTTCATCAGTCATAAATGGACTAAATCAACCCATCATCACAACCCCAAATCAGTATGTAGCACCTCCTCAAGTTGGAGCGGGACATTCTATGGTACTATATTCGAACCTCTTTCTTTTCTTAATCCCTTTGTGAAACTTGGTTTTCAAATTCTCTGTTCAAGGACCTTTTATTTTTTTTATTTTGGTTATTTATTTATATTTCTGAAAAAGAAACATAATTTTTATAGATTCAATAAATAAATAGTTACAAGTAGGTAGAACAAAGAAAGGAACAGGCAACCAACCTTAATTAGTGTATAAATTTCCAGGATATAATTTAAGGATATGGTTAATCATATCAACCAGGAATATATTATATCGTTACTATATTATTATTATTATTATTATTATTTATGAAACTGTCGACTCTTTTGATAACATGAAAAGTAGTCATGCATATGATATTAAGTAGTGTATAGGTAAGGACGCTAGTTCTTAGAAATTGTGTTTTTCTAAGTCATTGTTTTCTTTTGCGAGAGAAAGAATCTAGGTTTTAGTTTAACTAAATACTAATTTGTTGGCAATGATTTTATTAGAGCTTATTTGACTAATTTGGATTTTTGGGACTTCTCTGGTGAAGGCGCCCCCTGTTTATCCATTTCCAGATCCTTATTACAGAAGCATCTTCACTCCCTATGACTCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTAGTGTAGGTTGGAAGGGCATAATTACTTCATTCGAGCTTGGAAGAATGCATAACCAAGTATAGATACAACTATTCAAGAATCATGGCTTTCTTAAACCGAAAAAATGAACAACATCAACATGAAAGGAAGCTTAATTTATCAGATTGTCTTCTTAATATAACTTATGACTTGTTGATTTTGATATAATGGTTTGTTTTACCTTTTCTAGTCATTATTTGATTCCTAGTTTATTGCTCATTTTAGGTTCATCTTCAATTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTACGACGTCGACAATCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGGTGTGCACAAATATTACCTCATTGTTAATTTCTGGGTGTCATAATTGTGATAAGCCTCCCATTGTATATACTTGCTGATTTTGATATAATTATTTCTTTCCTTCCTTGATGCTTCATTCTTTAGTTTTTAACTGTGTAGCTTCAATATGTTGTGCAGCCCTACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGTCGGTTTCTCAAATCAAATAAGAATGAGAACCAACAAAAAGAAGTGGCATCAGGTGATAAGTCACAGCCAAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAACTGACGTCTGAGGCATTGTTGGAGAATGGTGAACAGCGCATGTCAACAACCGTAAGGAAATTGAGGTCCCAATACCAGCTTCAGTTGTCTGAGTATTACTTCATCCTTGATCTATACTGGCAGCATTTTAGCATATAGGTTTTGGTAGCATGTTACTTAGGGAGGATCCAGAATGTAGTAGGTAAAAGTATGCAAGTTTTATTACCATGGTAAATACTGAAGTGAGTTAGCTGATTGTTCTGTTTGAGTGGTGGTTGCATTAGGTTTGCAAATATTAGATTCACTATTTTGCAGTATTAGTTGCTATTTACGTTGCTCCCCACCTC

mRNA sequence

TATGCTCTTATTGGATTCTGAGCTTCCTCTGTTCGCTCTTCTTAAACTAAGAAATCAAGGCGAAGAAAGACGACGAAAAAACTACAACAAACGCACAGTCTTCAGTTGCAGAAGAAGAAAAAACGAATTTGGGGGTGAGAATTAGCGGACCCCCTTCCACAATTCCCGCTCTCCAGTGTCAGGTTTCATTTGGTGTGCACTACCACCCCATGACTTCCTCTGTCCACGATTATTCTGATAATGGCGAGGCTGATGATCAGCAAAAGTACTCTGATTCTCACAATCATTCTTCATCAGTCATAAATGGACTAAATCAACCCATCATCACAACCCCAAATCAGTATGTAGCACCTCCTCAAGTTGGAGCGGGACATTCTATGGCGCCCCCTGTTTATCCATTTCCAGATCCTTATTACAGAAGCATCTTCACTCCCTATGACTCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTTCATCTTCAATTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTACGACGTCGACAATCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGCCCTACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGTCGGTTTCTCAAATCAAATAAGAATGAGAACCAACAAAAAGAAGTGGCATCAGGTGATAAGTCACAGCCAAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAACTGACGTCTGAGGCATTGTTGGAGAATGGTGAACAGCGCATGTCAACAACCGTAAGGAAATTGAGGTCCCAATACCAGCTTCAGTTGTCTGAGTATTACTTCATCCTTGATCTATACTGGCAGCATTTTAGCATATAGGTTTTGGTAGCATGTTACTTAGGGAGGATCCAGAATGTAGTAGGTAAAAGTATGCAAGTTTTATTACCATGGTAAATACTGAAGTGAGTTAGCTGATTGTTCTGTTTGAGTGGTGGTTGCATTAGGTTTGCAAATATTAGATTCACTATTTTGCAGTATTAGTTGCTATTTACGTTGCTCCCCACCTC

Coding sequence (CDS)

ATGACTTCCTCTGTCCACGATTATTCTGATAATGGCGAGGCTGATGATCAGCAAAAGTACTCTGATTCTCACAATCATTCTTCATCAGTCATAAATGGACTAAATCAACCCATCATCACAACCCCAAATCAGTATGTAGCACCTCCTCAAGTTGGAGCGGGACATTCTATGGCGCCCCCTGTTTATCCATTTCCAGATCCTTATTACAGAAGCATCTTCACTCCCTATGACTCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTTCATCTTCAATTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTACGACGTCGACAATCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGCCCTACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGTCGGTTTCTCAAATCAAATAAGAATGAGAACCAACAAAAAGAAGTGGCATCAGGTGATAAGTCACAGCCAAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAACTGA

Protein sequence

MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPPVYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKEVASGDKSQPNINLNSDKSDLASSEN

Homology

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BLAST of Carg19313 vs. NCBI nr
Match: KAG6581472.1 (Nuclear transcription factor Y subunit A-7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034763.1 Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.7 bits (1036), Expect = 9.7e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

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BLAST of Carg19313 vs. NCBI nr
Match: XP_022925987.1 (nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_023544362.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo] >XP_023544363.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

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BLAST of Carg19313 vs. NCBI nr
Match: XP_022977923.1 (nuclear transcription factor Y subunit A-7 [Cucurbita maxima] >XP_022977924.1 nuclear transcription factor Y subunit A-7 [Cucurbita maxima])

HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHD+SDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP
Sbjct: 1   MTSSVHDHSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg19313 vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia])

HSP 1 Score: 377.1 bits (967), Expect = 9.7e-101
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg19313 vs. NCBI nr
Match: KAA0052492.1 (nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa] >TYK13332.1 nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99
Identity = 190/205 (92.68%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEAD+Q+KYS+S NHSSSVINGLNQP   TPNQYVA PQVGAGHSM PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQP---TPNQYVASPQVGAGHSMVPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

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BLAST of Carg19313 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-50
Identity = 117/203 (57.64%), Postives = 143/203 (70.44%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSS+H+ SDN  + ++Q+  DSH     + +  N   I T   Y  P   G  +SMAP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDSH-FQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIF P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +   ++
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 VASGDKSQPNINLNSDKSDLASS 204
            +  +KS    NL++ KS +A+S
Sbjct: 181 SSHEEKS----NLSAGKSAMAAS 186

[Close]

BLAST of Carg19313 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.3e-43
Identity = 109/207 (52.66%), Postives = 142/207 (68.60%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVH+ SDN E+  +++  DS      V +G +   I T + Y  P        MA  
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEP--------MAHG 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           +YP+PDPYYRS+F     Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK--NENQQ 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K   ++++
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 180

Query: 181 KEVASGDK--SQPNINLNSDKSDLASS 204
           +E A+ D+  S+ + +L S+K  +A+S
Sbjct: 181 EEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of Carg19313 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.0e-25
Identity = 79/183 (43.17%), Postives = 102/183 (55.74%), Query Frame = 0


Query: 20  YSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPPVYPFPDPYYRSIFTPYDSQ 79
           YSD   +  S+ +G+ QP    P+  +    VG   S      P+ DPYY  +   Y   
Sbjct: 93  YSD--KNQESLHHGITQP---PPHPQLVGHTVGWASS-----NPYQDPYYAGVMGAYGHH 152

Query: 80  PYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESEN 139
           P    PYGG P           + +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E 
Sbjct: 153 PLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEK 212

Query: 140 KALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE---NQQKEVASGDKSQPNINLNSD 199
           K +KSRKPYLHESRH HA+RR RG GGRF K    E    + +E ++G  +Q   + NSD
Sbjct: 213 KLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNSD 255

[Close]

BLAST of Carg19313 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.6e-24
Identity = 87/210 (41.43%), Postives = 115/210 (54.76%), Query Frame = 0


Query: 3   SSVHDYSDNGEADDQQKYSDSHNHSSSVIN-GL--NQPIITTPNQY----VAPPQVGAGH 62
           S+  D + NGE D   K S +   S SV N G+  N P ++  N +    V PP++  GH
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPEL-VGH 125

Query: 63  SMAPPVYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 122
            +A    P+ DPYY  +   Y  Q    +PY G P          +    LP D  +EPV
Sbjct: 126 YIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPV 185

Query: 123 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 182
           +VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E
Sbjct: 186 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSE 245

Query: 183 NQQKEVASGDKSQPNINLNSDKSDLASSEN 206
            +  E A G   +     NS  S+   +++
Sbjct: 246 VEAGEDAGGRDRERGSATNSSGSEQVETDS 262

[Close]

BLAST of Carg19313 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 93  HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHE 152
           HL++MG+  + VPLP    E EP+FVNAKQYH ILRRR+ RAK E++NK +K RKPYLHE
Sbjct: 157 HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHE 216

Query: 153 SRHLHALRRARGCGGRFLKSNKNENQQKEVAS 184
           SRHLHAL+RARG GGRFL + K +     + S
Sbjct: 217 SRHLHALKRARGSGGRFLNTKKLQESSNSLCS 248

[Close]

BLAST of Carg19313 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg19313 vs. ExPASy TrEMBL
Match: A0A6J1IRJ2 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111478068 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.2e-108
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHD+SDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP
Sbjct: 1   MTSSVHDHSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg19313 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.7e-101
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEAD+QQKYS+S NHS SVINGLNQP I TPNQYV PPQVGAGH+MAPP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASG KSQPNINLNSDKSDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg19313 vs. ExPASy TrEMBL
Match: A0A5D3CPM7 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009570 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99
Identity = 190/205 (92.68%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEAD+Q+KYS+S NHSSSVINGLNQP   TPNQYVA PQVGAGHSM PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQP---TPNQYVASPQVGAGHSMVPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of Carg19313 vs. ExPASy TrEMBL
Match: A0A0A0KIV0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G525440 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.8e-99
Identity = 189/205 (92.20%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVHDYSDNGEAD+Q+KYS+S NHSSSVINGLNQ   +TPNQYVA PQVGAGHSM PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ---STPNQYVASPQVGAGHSMVPP 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIFTPYD+QPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN Q E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGDKSQPNINLNSDKSDLASSEN 206
           VASGDKSQPNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of Carg19313 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 )

HSP 1 Score: 199.5 bits (506), Expect = 2.6e-51
Identity = 117/203 (57.64%), Postives = 143/203 (70.44%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSS+H+ SDN  + ++Q+  DSH     + +  N   I T   Y  P   G  +SMAP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDSH-FQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIF P      PPQPY G   VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +   ++
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 VASGDKSQPNINLNSDKSDLASS 204
            +  +KS    NL++ KS +A+S
Sbjct: 181 SSHEEKS----NLSAGKSAMAAS 186

[Close]

BLAST of Carg19313 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 )

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-48
Identity = 113/203 (55.67%), Postives = 139/203 (68.47%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSS+H+ SDN  + ++Q+  DSH     + +  N   I T   Y  P   G  +SMAP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDSH-FQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
            YP+PDPYYRSIF P      PPQPY G       LMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP------PPQPYTG-------LMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +   ++
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 180

Query: 181 VASGDKSQPNINLNSDKSDLASS 204
            +  +KS    NL++ KS +A+S
Sbjct: 181 SSHEEKS----NLSAGKSAMAAS 182

[Close]

BLAST of Carg19313 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 )

HSP 1 Score: 175.3 bits (443), Expect = 5.2e-44
Identity = 109/207 (52.66%), Postives = 142/207 (68.60%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60
           MTSSVH+ SDN E+  +++  DS      V +G +   I T + Y  P        MA  
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEP--------MAHG 60

Query: 61  VYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 120
           +YP+PDPYYRS+F     Q Y P PY   P V LQLMG+QQ GVPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK--NENQQ 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K   ++++
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 180

Query: 181 KEVASGDK--SQPNINLNSDKSDLASS 204
           +E A+ D+  S+ + +L S+K  +A+S
Sbjct: 181 EEEATSDENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of Carg19313 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26
Identity = 79/183 (43.17%), Postives = 102/183 (55.74%), Query Frame = 0


Query: 20  YSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPPVYPFPDPYYRSIFTPYDSQ 79
           YSD   +  S+ +G+ QP    P+  +    VG   S      P+ DPYY  +   Y   
Sbjct: 93  YSD--KNQESLHHGITQP---PPHPQLVGHTVGWASS-----NPYQDPYYAGVMGAYGHH 152

Query: 80  PYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESEN 139
           P    PYGG P           + +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E 
Sbjct: 153 PLGFVPYGGMP----------HSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEK 212

Query: 140 KALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE---NQQKEVASGDKSQPNINLNSD 199
           K +KSRKPYLHESRH HA+RR RG GGRF K    E    + +E ++G  +Q   + NSD
Sbjct: 213 KLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNSD 255

[Close]

BLAST of Carg19313 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-25
Identity = 87/210 (41.43%), Postives = 115/210 (54.76%), Query Frame = 0


Query: 3   SSVHDYSDNGEADDQQKYSDSHNHSSSVIN-GL--NQPIITTPNQY----VAPPQVGAGH 62
           S+  D + NGE D   K S +   S SV N G+  N P ++  N +    V PP++  GH
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPEL-VGH 125

Query: 63  SMAPPVYPFPDPYYRSIFTPYDSQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPV 122
            +A    P+ DPYY  +   Y  Q    +PY G P          +    LP D  +EPV
Sbjct: 126 YIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMP----------RERTALPLDMAQEPV 185

Query: 123 FVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 182
           +VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E
Sbjct: 186 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSE 245

Query: 183 NQQKEVASGDKSQPNINLNSDKSDLASSEN 206
            +  E A G   +     NS  S+   +++
Sbjct: 246 VEAGEDAGGRDRERGSATNSSGSEQVETDS 262

The following BLAST results are available for this feature:

BLAST of Carg19313 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581472.1	9.7e-109	100.00	Nuclear transcription factor Y subunit A-7, partial [Cucurbita argyrosperma subs...	[more]
XP_022925987.1	2.8e-108	99.51	nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 ...	[more]
XP_022977923.1	1.1e-107	99.02	nuclear transcription factor Y subunit A-7 [Cucurbita maxima] >XP_022977924.1 nu...	[more]
XP_022146628.1	9.7e-101	93.17	nuclear transcription factor Y subunit A-7 [Momordica charantia]	[more]
KAA0052492.1	4.1e-99	92.68	nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa] >TYK13332....	[more]

BLAST of Carg19313 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JP1	3.6e-50	57.64	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	7.3e-43	52.66	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	4.0e-25	43.17	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	7.6e-24	41.43	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	1.7e-23	60.87	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg19313 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED47	1.4e-108	99.51	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IRJ2	5.2e-108	99.02	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114780...	[more]
A0A6J1CZ21	4.7e-101	93.17	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3CPM7	2.0e-99	92.68	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KIV0	9.8e-99	92.20	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G52544...	[more]

BLAST of Carg19313 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30500.2	2.6e-51	57.64	nuclear factor Y, subunit A7	[more]
AT1G30500.1	2.7e-48	55.67	nuclear factor Y, subunit A7	[more]
AT2G34720.1	5.2e-44	52.66	nuclear factor Y, subunit A4	[more]
AT3G20910.1	2.9e-26	43.17	nuclear factor Y, subunit A9	[more]
AT5G12840.1	5.4e-25	41.43	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 114..136 score: 73.91 coord: 145..168 score: 78.01
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 110..171 e-value: 4.2E-35 score: 132.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 113..168 e-value: 4.1E-26 score: 91.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 1..190
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 111..171 score: 36.842766
None	No IPR available	GENE3D	6.10.250.2430		coord: 111..172 e-value: 2.9E-31 score: 109.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..205
None	No IPR available	PANTHER	PTHR12632:SF66	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7	coord: 1..190
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 116..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19313-RA	Carg19313-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity