Carg18653 (gene) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
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TCTCTATTTTTTTTTCTCTCTTTTTCTTTGTTTTTTCATTTTCGTCCCAAGACTCCCCACTTCAAGATCTTCGTCTCCTCCATTCAATCTCACTCTTCCTGGAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGGCCTCCTCGCTGCTCCTCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTATGTTGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGATGCTCAAAGTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGTTACTTCAGTTGATCTCCACCGTTATTTTCACACCCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGACAAAGGTTTTGGGTTTGTGAGATATGGCACTCATGCTGAAGCAGCTTTAGCCATTCAAATGGGCAATGCTCGAGTTGTCTGTGGCAAACCAATTAAGTGTTCGTGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTGCCCCTCTTCCACCACCAAATGTGGGACACATGCCAGGTCTGTCTGCCGCCGACCTTGCTGCCTATGAACGGCAAATGGCGTTGAGCAAAATGGGTGCAGCACGAGCGGTAATGCATCCGCAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATTGGAATTGGGATTGGTGGTGCTGGCACTAGTCAAACTTTATATGATAGTGGGTTCCAAAATATTGCAACCACCCAACAGCTGATGTATTACTAGGTGTATTTGAATTGCTGTATGATGCATGCTTGTAGTTGTTTTGTGGAACCAAAGAAAGTGTTCCGTTCTGGGGATTGTGATGCAAGTACTATATAGCCTGGTGGTGGGGGGGTTTGATTGCAAAGTCATTTTAATTTGTCTTTTACATTGTTGGTCTAGTTTGTAATATCCTGCTAGAAAGAAGGATTAGTTCTTTGACTAAATATATTGATTGCTGAATATTGAATAGAGGATGTGAGAAGGATGAAAATAGATTATTGAATCTTTTGTCTTTGGCTGTTGGTTGTTACGGTGAGGTAATTGCAATTCACACCACATTTCTTTTCCTTCTTTTCCTTCTTTTCCTTCTCTTCCTAAACCATCCACTCAGATTACAAATTTGGATCGCAGTTAAGGGGCAGCATAGATTGAAGCTCACCATCACATCTCACCCAGGGGATGTTGAGATATTTTGGAATATAAATGACATTTGTGTTGCAACTTACACGAACAAAGTGGGTCTAGCTGTGTTCACTTTCAAGCTTGGGTAGCTATCATATTGGTGCTCACAATAGCTTTAAACTAAATCAACTTCATGATATGCTTCAGGCCGTCTAGCCTGCACTCATGAACACAGCATCCATGTCAGTCTCCGGTATCTTTGACTTTCACCTGAGTTTCTACTTCCCAAAGCCCTCACCTCAGGAGCTGATCCAAACCTTTTTGGAATGTTCCAACAAATTTTAATCAAGAATAGCAAACCCAGATGCCAGGAGACATGATGATCAGTTATACACCGAGCTCCAGAAACCTCATCAATTGAACGAGGCAGCCGAGTTGTCATCATACTGCCCTCTCCATGCGTTTCCACTGTCCGTCCCGCTGCAAGCTTGATTGGGAGCCTGAATGTGACCCAAATTTCCATTTAAACTCATCTGCTGTACTTCAGAAGATGATAGGATCTTTATGCTCTGAACACAGCTCACAAACTCCTCCCAAGGATCATCGCCAACTAGAAGTATATCATTTTCATGATCCACATAAACAAGTTTCCAATCAGTTCGTTGAGGATCTTCTAACTGCCCTTCAATACCAAACA20040060080010001200140016001800200022002400Expect = 2.7E-18 / Score = 76.8Expect = 1.4E-23 / Score = 94.3Expect = 3.7E-17 / Score = 73.0Expect = 4.7E-15 / Score = 55.2Expect = 7.3E-18 / Score = 64.2Expect = 6.6E-11 / Score = 41.9Score = 15.732639Score = 14.811647Score = 17.233515Expect = 4.9E-5 / Score = 32.7Expect = 11.0 / Score = 3.6Expect = 1.3E-26 / Score = 95.2Expect = 5.6E-21 / Score = 76.6Expect = 3.4E-23 / Score = 83.7Score = Score = Score = Expect = 1.87917E-34 / Score = 121.574Expect = 5.15081E-38 / Score = 130.886Expect = 5.58538E-52 / Score = 167.684Score = Score = Score = SequenceSM00360PF00076PS50102PS50102PS50102SM00361G3DSA:3.30.70.330G3DSA:3.30.70.330mobidb-litePTHR47640:SF40PTHR47640cd12354cd12352cd12619SSF54928SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 288..357
e-value: 3.7E-17
score: 73.0
coord: 82..151
e-value: 2.7E-18
score: 76.8
coord: 167..240
e-value: 1.4E-23
score: 94.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 168..238
e-value: 7.3E-18
score: 64.2
coord: 83..149
e-value: 4.7E-15
score: 55.2
coord: 289..355
e-value: 6.6E-11
score: 41.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 81..155
score: 15.732639
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 287..361
score: 14.811647
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 166..244
score: 17.233515
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 167..240
e-value: 4.9E-5
score: 32.7
coord: 288..357
e-value: 11.0
score: 3.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 161..259
e-value: 1.3E-26
score: 95.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 265..365
e-value: 3.4E-23
score: 83.7
coord: 75..160
e-value: 5.6E-21
score: 76.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..284
NoneNo IPR availablePANTHERPTHR47640:SF40NUCLEOLYSIN TIAR-LIKE PROTEINcoord: 39..444
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 39..444
NoneNo IPR availableCDDcd12354RRM3_TIA1_likecoord: 287..361
e-value: 1.87917E-34
score: 121.574
NoneNo IPR availableCDDcd12352RRM1_TIA1_likecoord: 83..153
e-value: 5.15081E-38
score: 130.886
NoneNo IPR availableCDDcd12619RRM2_PUB1coord: 167..241
e-value: 5.58538E-52
score: 167.684
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 159..255
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 70..159
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 279..368