Carg18653 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18653
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	oligouridylate-binding protein 1-like
Location	Carg_Chr12: 11987963 .. 11997589 (+)
RNA-Seq Expression	Carg18653
Synteny	Carg18653

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTATTTTTTTTTCTCTCTTTTTCTTTGTTTTTTCATTTTCGTCCCAAGACTCCCCACTTCAAGATCTTCGTCTCCTCCATTCAATCTCACTCTTCCTGGAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGGCCTCCTCGCTGCTCCTCAGGTTTCTATCTCTCTCTTTTACTTTTGTTTTTTTGTTTTTTTTTTCCCGTTAAATTTGGTTGCAAGATATGTATCCTCTTCTGATCGATCCTTTATTTCTCAGTTTTTTATTACTCCAGCTTCAATCTCTCTCCCCAGCTATTTTCTTGAAATCTGATTTCATTTTATCTATAAGGTGTAATATGTTTTTTCCTCATTTTAATGGAAAACGGGAAGGATTTCACTAGAGAACTAAAAGTTCAATAGGTGATAAGATATCAATCTTGGAAAGGAGCCCCGTGGATTCAAAACAAATCCTCCAATTGGTTATAATCATGCCGACGAAAACATTTTCGCCAGGAGCTGTGCCAATAAGAGTCTTGTACTGTGTAGTATCCCAATTGAACTCTTCCCAAGTGATGCGTAAAAGTGCGTGATTTCTTTTCAACCACAACTTCCATGGCACAAGATTTTATAAATATGGTCACTGAGAAGCTTTTTTAGACTTCCTACCGAGGTCAAACGCCTGTAATAACACATACCAAAGCTCCTTTGTAGTTGGAAAATGAAGAAACAGTTGGCTTTGGGTCTTGGAGTTCTCTTAGCATAAAAGACAACACTTAGGATTGGAATTAAAAAATCATACATGATGTCCAGAGACTATATTTCTACCTAAATGAAAGAAGCACATGGACATTTGTCTAGTGTGAGTCGCCTTTTATCAAATCTAGTAACAATGTACTGTTTTCATGTTTTTTTTATGAGTTCGGTTTCGCCCCCTCCTATTTCACTTTGATTGGCCCATTTGTGCTCACATACATACATGATAACATTTGCATGTTAATGAGTAAGTAGATGACAATCGATTAACTAGTTTTCAAATATTACTCCTTTCTATTTTTTTCTTCAAACAAGGAACAAGACTTTTCATTAATGCAATGATTAAAAGGTTAACTTCAAAGATACAAACTCCACGTGAGAGTGAACGAAATAATAATAATAATAATAACGAAAACAATACAAGACTGGAAGTAACTAAAATGCAACAATCCTCCTCTCTATTCTTCTTGTACAAATTGTTGCCATTATTAATCATTATGCGAGTCTTTGGAGCCATCCAGTATTCGTTCAGAAATATGATTGTTAATGTATCAGTATCATATTCATCTTTACATCCATGACAAGTCCTTGGAGATTTATTGCTGAAGCACGAGTCAATTGTAGTCTTTTTCTTCATCCATGTACTTAGAACGTTACCCATTGTCTGTTGGTTGAGTCTGTCAGTAACACTATTTCTACATGGGTGAGGAGCGCAGATATGTTTTTCTAGGAAGGTTCTGTTTTTCTTTTATCCTTTCTTGTTTTTTTACTTTTTTATTTTGCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTGAGTGTTAAATAGATATTTTATTTCCTTTTTCCATTTTTTCATTTAGTTCATTTTAAATTTTAGATAGTAAGATAAGTCTTTATTTGGAATAACTTTCCCATTTTGCCTTCGATATAAGGTTCCTCCTTGGATTTGCCATTTTTTGATTGATTTCCATTGACACCTTATCATGTTCATTGTTTGCTAAAACTTATATCATTCTGGTTCGTATGTTGTTTGAATGCATTCAAGTACACTGATTTCTATTACATCTTTTTTTGTTTGTAATTAGCCATCAATCTGAACTAATGAAAAAATATAGGTATGTTGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGGTGTGCTTTCCATTTAGACTATCATTTGGTGCTATACGAACTCTTTCCATTACGATAATAAGAACTTTACCATCGGTTATAACTTTTGGATTTTGTTGGACTGTTTCTTCCTCAAGTAACCAGTTGGTGGAATTATTTCAAATAATCCAGTGTTGTCTCACAGATCAGGATCTTCTTTGAACGTGTTTTTTGTTAAATAAATAGGTTAAATCTTCTATCTCAACTTTTCTTTCTATTTATGCAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTAGGTGAAATTCTTTCTTGTATTTTTATTGACATTAGCCGAGTCATATATTTTGATATAATTTCACACAGGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTTGTATGCTCAGATTGTTTCTTTTTCCTTCGATTCTGTTTCCAATTATGATGAGTTTGTAGCATGCGGCTGCTGACATTTTTATATGGTGTTTTTATGCAGGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGTAAGTTTGTTATCCAAATTTTTGTTATGAGTCAGTCTGCTTGGCTTATGTTCAATGTTTGAGATGCGGTAGAGCTTAACTTAATACTATTCAACTGAGAGCACCTTGCTCCAGCACCTCTAACCTTATTTTCCTTTAATACTTCAGGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGTTTTGGAATTATTTCAATATGATGTTTTTACCCCTTCCTGAGTCGCCCATCCTTTTGTTACCAATGTAGGAAGTCTTGTATTTGTTTTCTTCAGATTATGTTCATAATTGTACTTCTATTGATAATTATTTATTCTGCTTTCAGGATGCTCAAAGTGCAATTAATGACATAAATGGTATTCCTACTCTCTCTCTCTTGTTTGGAAATCTTATGTTGTATATTTATCTATTTAGTGACTTAACCATATCTTGTCTTGAATCATGCAAGTAAAGAATGCAACGAATGGCATTATTGGGGAAATGAGAAACAGAGTTAAAATTATCTTACGAGAAATGAGTATGGAAACTTGATGTGAAAACCCAAGGGAACTGGATATGAGAACCTCTTCCATTTAAGGTCCCCCAAAGATCATCCTTGAACCTCGAAACAATTTGGATCAAGTCAAAAGGAAAAACTAGATTTATATTACCTTCAGGTCAATGATCAACGAGCAAGGATATATATATATATAATATATATATATATATATATATATATATATATATTTAATTTTTTAATTTTTTAATTTTTGAAGTTTAAGGTTGTAAAGACTCCAAAAGGTTAGTGATCAATCAAACTTGAACCTTTATAGGGACACTTGATCACAGAGAATTGACAAAAGGGTTTGGGAAAGGTTCTCGGCTCTTTAGAGTCGCTCAAACACTGAATTTATTTCATCGAAGTCTTAACTACAATGACCTGAATAAGGCATGTAAGTAATCTTTAGGGAGGCAACAACCGAAGAAGGAAAACACTATAAGATCTCAAACAAACAAGGAAAACAAAATCCTACCAACCCAATAAGGCAAGAACTAAACTAAGTAATGTGTACTTTTAAACAGTATCTCCCAAATAAATCTTAAACAAATGTCAAATATAAGAGTTAATACAAGGCTTAGAGACAAGCTAAAAAATAGTCTTAAACTAGGACGTTTCTATAGGCCTCCCGAAGCTCTTCCTATTGGATTGTGTTCAAGTAGCTTGGGTTCTTTGGAAAAGATATCTTTGATGCAATCTTTGTAAGCTTTTTGAGCGTTTGAAAGGGAATTCGAATTGGCAATATAGGTTTGGATCTTATTTGGTTAATAGAGCCAAATGTTCAGTTATCAGTATTAATTGCAATTAGTCTAAGTTGGAATGTTGGGCCGCTTGGGTGGGCTGTGAGGTGGGGTCATTCCCTTTCTCGTACTTAGGTTTCCCCCTTGGTCATAATTTTAGAAGCATTTATTTCTAGGATCTTGTGTTGAAAAGGTTTAGAAATGATTATCTTCGTGGAAAATAAGTTTTCTCTCTAAGGGAGGAAGACGAACCCTTGTCATTTGGTCCTCAGTGGTTTCCCAGTCTATTTTCTTTCCTTGTTAGTCCCTGTGAACGTTTGCAATTCCTTGGAGGCAACGCATGCGTGATTTTTTTGTGAGAAGGGGTGGAGGAAGGGAAGGGTTCACATTTGGTTATTTGGGAGATGGTAGCGAGACCGGTGGAGTTTGAGGGTTTGGGTATAGGGAATCTTAGTGTGCACAATTAGGTCTTGTGGGTAAATGGTTAAGCCATTTCTCTCAAGATGTGGCATAAGGTTATTGTGGGTAAGATCCTTTTGATTGGTCTTCGAAGGAGATTTCAAGAGGTACTGCCAAAAATCCATGGAAAACTATCTCTGACAGGTTTCCTTCGTTTCCTAGTTTGTTCATTGTTACGTTGTGATAGGCTGAACACTTATTTCAGAAGACAATTGGCTAGGGGGTAGTTCCCTCTGCTCGTTGTTTTCCTTGACTTACCATCTTTCCTCTTTGAAGTTTTGTTATGTGCTCTATCCTATCGTCTTTTGGGAGTTCTTCGTCTATTTCCCTTGGCCTTAGTTGGCCCTTTTCTAATAGAGAGTCGATTGATGCAGTGGCCCTTTTGGCCTTGCTTAGGTTTTTTGCCATTTAGAAGAAGAGATGTTCGCTTTTGGAGCCTTGATTGAGCTCTCCCATTTTTCCTCTATTTTGGAAAATCAAAATTTCGAAGAAGGTTTATTTTTTTGTTTGTGAAATCTTTCAAGGCAGGGTTATACTCTGGATCGTGCTTAGAGATTTTTGCCCAACTTGATTGGGCCTCAGTGTTGTATCCTTTGCAAGGAAGCAGTCGAGGACTTGGATCATCTCCTATGGTTATGTCAGTATGCTAGATCGATTTGGAGTGGTTTCTTTAGGTTTTTTTTTTGTCTGGTGGCCAAGGAGTTGTAAATCCATGTTGGAGGAGCTTTGTTACCACGTCCTCTCGTGAAAAGGGTTGCCTACTATGGCATGTTTTCCTGGGTGCTATTGTTTGGTTTGGGGTCTTTGGGGTAGGATTTATAGAGGGTTGAGTGACCTTTAAGGGGTCTTTGGGGTAATTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTATGTTTTCTTTCATCTTTCTCAAATGAAAGTTGGACTTTTTGCTATAATAATAAAAAAAAAAAAAAAAAAACTATTTAAATAGCTATTGGATTTTTTTTTGTCAGACACGTGTAATAAAGTGTGCATGTCAGGTTCTACGTAATTTTATTAACTGGATATCATTGCTATGCTCTTTGGCATTAAAAGTTTGTCTTGAATATCATTTCTTTATGCTCACTTTTTGGGACTTGGATATTGTTGTTTCTTTTTATTGGGAACTGTTCTACATTTTTTTCTTCTTTTTTTGACGATAAAGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGGTATTTCATCTAGAAATGTATATGTATATATATGTTTTTATCATTCATCTAGAGGTTTTTAGATTTAATAATCTTCCTAGAATTCTTTTATTTAGCTTTTCAAACTTTATAGTGATTGTTGCAAATCTTCTAACATTTCTATACGCTGATAGTTTTGGCTGTTGAATAGGGAGCCTTTTCTTCTTGGTTTTCCAGGCCCGAGGTTATTTATGTCGATCTTTACTTTCACTCTTAACCTTTGACTTGTTCTTGCTAGTTCTTTCTCTAGTTCTATCTGGCTCGTGCATTCGAACACTTGGCCATAGTATATCTAATTAAACATACATTTTTCTGGATCTTGTCTAACAAGAGACATATCTTCATGAATGTCTTGACTTTCAGGTCTGTATCTTGCTTATCTACATTGAATAATCATTCCAAAATCAACTTAACATAATTTTTCTTCTAGAGGCTTGTGCCCATGGAAATTTGATCCTAGGCTTGTCATAAGGAAGCCGTTGGATTTAACCTGACAGTTGGTGTTTAAATCCCTTAAATATCACCATGAAGAAATGCATTTTAAATATTAAGTTGATGCAAGAGCTAATGAAGGATTTGTTCGAATGAAATGAATAATTTGATAGAATCAATTTAGCAATTGGAGAAAAAAGTATAAGAATAGTCAACTCCATAAGTTTGTGTAGCTTTTAGCAGCAAGACAAGTTTTCAACCAAGCTACCGATCTGACTTTTTTGTGTCTCTAACTTTGTAATCCCTTAGATTTCTATTTGGTAATTTTGAAGGTTGTACTGTACTTAGTTTAAGTTTTGGGGGATTCTTTTTGTTATAATCTCTTTAGAAAGTTGGTAGTTTGTAACTTTTCTAATAACCATGACATGTTTGTATTTCTTCTTGTTAAAAAAGACTTGGTAAATATAGTACAGATGATGAACTACATAAGACTGAGTTTATGTTACATAGAGAATTAACAAATCCACTTTTTGTCTCTAACTTCCTAATCCCAAGTTAAACAAAATTAACCTGGATTTAAACCACCTCTAAATTTTAAGTACCTTATGAATTTCTTAACTACCAATGTTGTTCTGATCTCTAATTTTGAGTGTTGAGTGTGATGAATAATTCAAAATTGATTAAATTTTCTGGTTAATTTTGATCAATACAACACATGTAGGAGTGAATAATCGAACCTACAATCTCTCTGAGGAAGTAGGGATGTCTTATCCATTGAGCTATGTGCACGTTAATCAACTTTTTGTTATTGATATATAATGAGTCCTTGTATATGGAATTGTGGTCAGTGAGTGTTTTTCCTTACTCGGGCCTTTTATTTTTGCTATCACTGCTCTCAGAAAACTGCATCCCTTTGATGAGGGACATTTATATTTTTGCTTCATTACTTTTAGTTTCACCATTTTGTCATGCCTCTTTTTGCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGCAAGGAAATTCTTTTGATAATATAACAGTAACTAATATGTTAATAGTAGTTGTTGAAACAGCTAACTTGGGTGAACCTGCAACTGGATGGCTTGTCAAAGTTCTCTGCCATCTCTAAAAGCATAGGCATGATGGTGATGAGTTTCTAAAATTTATCTAAGAAAGTTTGGCTTGTATCTTTTGTTCGCTTCTTATATGGCCTTTTTGTGGATAGTTGTATTCTTTTATTTATTTTTTGATGAAAGCATGATCTTCAGAATTTATATATCTAATGTGTTGTACAAGCAATCCTTCATTTCTCGATTAAAACCTGAATTAAAAACATGTCAGTTTTGTTATGTGATAGCATGATTATTTTATTATTGCATCATTTTCAGTGTTTATGACTCTTCAGGTTACTTCAGTTGATCTCCACCGTTATTTTCACACCCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGACAAAGGTTTTGGGTTTGTGAGATATGGCACTCATGCTGAAGCAGCTTTAGCCATTCAAATGGGCAATGCTCGAGTTGTCTGTGGCAAACCAATTAAGGTACAACCTTAATGAAAAATGTACAATTTTATCCTACTTGAATGTTAATTAATCATCATTTGATCTAGTTCTCAGAGCCAATATATATTTCAACTTGGTTATTTCGGATGGACAATTTGTGTCGAGTGAAAGAGACTAACTGCGAAAATTAGTGCGGGTTAATGTTTTTGCGTGAGTGTTTAGGACTTGAATTTTCATTTATCCACTTAATGTTTTTGTAATCAAATGATGCAGTGTTCGTGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTGCCCCTCTTCCACCACCAAATGTGGGACACATGCCAGGTCTGTCTGCCGCCGACCTTGCTGCCTATGAACGGCAAATGGCGTTGAGCAAAATGGGTGCAGCACGAGCGGTAATGCATCCGCAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATTGGAATTGGGATTGGTGGTGCTGGCACTAGTCAAACTTTATATGATAGTGGGTTCCAAAATATTGCAACCACCCAACAGCTGATGTATTACTAGGTGTATTTGAATTGCTGTATGATGCATGCTTGTAGTTGTTTTGTGGAACCAAAGAAAGTGTTCCGTTCTGGGGATTGTGATGCAAGTACTATATAGCCTGGTGGTGGGGGGGTTTGATTGCAAAGTCATTTTAATTTGTCTTTTACATTGTTGGTCTAGTTTGTAATATCCTGCTAGAAAAAAAATATGGGGCCACATCTGGAAATAAGCTCCAATCCTTCAATCTCCTTGGCCCTCTTCACATTTTTTTTTCCTGGAAGGATTAGTTCTTTGACTAAATATATTGATTGCTGAATATTGAATAGAGGATGTGAGAAGGATGAAAATAGATTATTGAATCTTTTGTCTTTGGCTGTTGGTTGTTACGGTGAGGTAATTGCAATTCACACCACATTTCTTTTCCTTCTTTTCCTTCTTTTCCTTCTCTTCCTAAACCATCCACTCAGATTACAAATTTGGATCGCAGTTAAGGGGCAGCATAGATTGAAGCTCACCATCACATCTCACCCAGGGGATGTTGAGATATTTTGGAATATAAATGACATTTGTGTTGCAACTTACACGAACAAAGTGGGTCTAGCTGTGTTCACTTTCAAGCTTGGGTAGCTATCATATTGGTGCTCACAATAGCTTTAAACTAAATCAACTTCATGATATGCTTCAGGCCGTCTAGCCTGCACTCATGAACACAGCATCCATGTCAGTCTCCGGTATCTTTGACTTTCACCTGAGTTTCTACTTCCCAAAGCCCTCACCTCAGGAGCTGATCCAAACCTTTTTGGAATGTTCCAACAAATTTTAATCAAGAATAGCAAACCCAGATGCCAGGAGACATGATGATCAGTTATACACCGAGCTCCAGAAACCTCATCAATTGAACGAGGCAGCCGAGTTGTCATCATACTGCCCTCTCCATGCGTTTCCACTGTCCGTCCCGCTGCAAGCTTGATTGGGAGCCTGAATGTGACCCAAATTTCCATTTAAACTCATCTGCTGTACTTCAGAAGATGATAGGATCTTTATGCTCTGAACACAGCTCACAAACTCCCTGTGCAATCAGTTGGTAAATGGAGTATTAAGACAAGAAAAGGCGGCGGGAAAAGATTTAAAATATTATACTAATTTATACTTACTCCCAAGGATCATCGCCAACTAGAAGTATATCATTTTCATGATCCACATAAACAAGTTTCCAATCAGTTCGTTGAGGATCTTCTAACTGCCCTTCAATACCAAACA

mRNA sequence

TCTCTATTTTTTTTTCTCTCTTTTTCTTTGTTTTTTCATTTTCGTCCCAAGACTCCCCACTTCAAGATCTTCGTCTCCTCCATTCAATCTCACTCTTCCTGGAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGGCCTCCTCGCTGCTCCTCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTATGTTGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGATGCTCAAAGTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGTTACTTCAGTTGATCTCCACCGTTATTTTCACACCCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGACAAAGGTTTTGGGTTTGTGAGATATGGCACTCATGCTGAAGCAGCTTTAGCCATTCAAATGGGCAATGCTCGAGTTGTCTGTGGCAAACCAATTAAGTGTTCGTGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTGCCCCTCTTCCACCACCAAATGTGGGACACATGCCAGGTCTGTCTGCCGCCGACCTTGCTGCCTATGAACGGCAAATGGCGTTGAGCAAAATGGGTGCAGCACGAGCGGTAATGCATCCGCAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATTGGAATTGGGATTGGTGGTGCTGGCACTAGTCAAACTTTATATGATAGTGGGTTCCAAAATATTGCAACCACCCAACAGCTGATGTATTACTAGGTGTATTTGAATTGCTGTATGATGCATGCTTGTAGTTGTTTTGTGGAACCAAAGAAAGTGTTCCGTTCTGGGGATTGTGATGCAAGTACTATATAGCCTGGTGGTGGGGGGGTTTGATTGCAAAGTCATTTTAATTTGTCTTTTACATTGTTGGTCTAGTTTGTAATATCCTGCTAGAAAGAAGGATTAGTTCTTTGACTAAATATATTGATTGCTGAATATTGAATAGAGGATGTGAGAAGGATGAAAATAGATTATTGAATCTTTTGTCTTTGGCTGTTGGTTGTTACGGTGAGGTAATTGCAATTCACACCACATTTCTTTTCCTTCTTTTCCTTCTTTTCCTTCTCTTCCTAAACCATCCACTCAGATTACAAATTTGGATCGCAGTTAAGGGGCAGCATAGATTGAAGCTCACCATCACATCTCACCCAGGGGATGTTGAGATATTTTGGAATATAAATGACATTTGTGTTGCAACTTACACGAACAAAGTGGGTCTAGCTGTGTTCACTTTCAAGCTTGGGTAGCTATCATATTGGTGCTCACAATAGCTTTAAACTAAATCAACTTCATGATATGCTTCAGGCCGTCTAGCCTGCACTCATGAACACAGCATCCATGTCAGTCTCCGGTATCTTTGACTTTCACCTGAGTTTCTACTTCCCAAAGCCCTCACCTCAGGAGCTGATCCAAACCTTTTTGGAATGTTCCAACAAATTTTAATCAAGAATAGCAAACCCAGATGCCAGGAGACATGATGATCAGTTATACACCGAGCTCCAGAAACCTCATCAATTGAACGAGGCAGCCGAGTTGTCATCATACTGCCCTCTCCATGCGTTTCCACTGTCCGTCCCGCTGCAAGCTTGATTGGGAGCCTGAATGTGACCCAAATTTCCATTTAAACTCATCTGCTGTACTTCAGAAGATGATAGGATCTTTATGCTCTGAACACAGCTCACAAACTCCTCCCAAGGATCATCGCCAACTAGAAGTATATCATTTTCATGATCCACATAAACAAGTTTCCAATCAGTTCGTTGAGGATCTTCTAACTGCCCTTCAATACCAAACA

Coding sequence (CDS)

TCTCTATTTTTTTTTCTCTCTTTTTCTTTGTTTTTTCATTTTCGTCCCAAGACTCCCCACTTCAAGATCTTCGTCTCCTCCATTCAATCTCACTCTTCCTGGAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGGCCTCCTCGCTGCTCCTCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTATGTTGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGATGCTCAAAGTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGTTACTTCAGTTGATCTCCACCGTTATTTTCACACCCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGACAAAGGTTTTGGGTTTGTGAGATATGGCACTCATGCTGAAGCAGCTTTAGCCATTCAAATGGGCAATGCTCGAGTTGTCTGTGGCAAACCAATTAAGTGTTCGTGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTGCCCCTCTTCCACCACCAAATGTGGGACACATGCCAGGTCTGTCTGCCGCCGACCTTGCTGCCTATGAACGGCAAATGGCGTTGAGCAAAATGGGTGCAGCACGAGCGGTAATGCATCCGCAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATTGGAATTGGGATTGGTGGTGCTGGCACTAGTCAAACTTTATATGATAGTGGGTTCCAAAATATTGCAACCACCCAACAGCTGATGTATTACTAG

Protein sequence

SLFFFLSFSLFFHFRPKTPHFKIFVSSIQSHSSWKMQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHAEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY

Homology

[Close]

BLAST of Carg18653 vs. NCBI nr
Match: KAG7021360.1 (Oligouridylate-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 912.1 bits (2356), Expect = 1.9e-261
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   SLFFFLSFSLFFHFRPKTPHFKIFVSSIQSHSSWKMQYQRLRQQAMMQQSLYPHPGLLAA 60
           SLFFFLSFSLFFHFRPKTPHFKIFVSSIQSHSSWKMQYQRLRQQAMMQQSLYPHPGLLAA
Sbjct: 1   SLFFFLSFSLFFHFRPKTPHFKIFVSSIQSHSSWKMQYQRLRQQAMMQQSLYPHPGLLAA 60

Query: 61  PQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSY 120
           PQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSY
Sbjct: 61  PQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSY 120

Query: 121 GFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDA 180
           GFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDA
Sbjct: 121 GFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDA 180

Query: 181 TLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCN 240
           TLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCN
Sbjct: 181 TLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCN 240

Query: 241 WATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTS 300
           WATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTS
Sbjct: 241 WATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTS 300

Query: 301 VDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHAEAALAIQMGNARVVCGKPIKCSWGS 360
           VDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHAEAALAIQMGNARVVCGKPIKCSWGS
Sbjct: 301 VDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHAEAALAIQMGNARVVCGKPIKCSWGS 360

Query: 361 KPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQMALSKMGAARAVMHPQAAQHALKQAA 420
           KPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQMALSKMGAARAVMHPQAAQHALKQAA
Sbjct: 361 KPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQMALSKMGAARAVMHPQAAQHALKQAA 420

Query: 421 MGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 456
           MGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY
Sbjct: 421 MGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455

[Close]

BLAST of Carg18653 vs. NCBI nr
Match: XP_022937527.1 (oligouridylate-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 844.3 bits (2180), Expect = 4.8e-241
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           ALSKMGAARA+MHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY
Sbjct: 361 ALSKMGAARALMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. NCBI nr
Match: XP_022965399.1 (oligouridylate-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 418/420 (99.52%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           ALSKMGAARA+MHPQAAQHALKQAAMGMG+GIGIGGAGTSQTLYDSGFQNIATTQQLMYY
Sbjct: 361 ALSKMGAARALMHPQAAQHALKQAAMGMGMGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. NCBI nr
Match: XP_023538357.1 (oligouridylate-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 840.9 bits (2171), Expect = 5.3e-240
Identity = 417/420 (99.29%), Postives = 419/420 (99.76%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           ALSKMGAARA+MHPQAAQHALKQAAMGMG+GIGIGGAGTSQTLYDSGFQNIATTQQLMYY
Sbjct: 361 ALSKMGAARALMHPQAAQHALKQAAMGMGMGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. NCBI nr
Match: XP_022154627.1 (oligouridylate-binding protein 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 827.0 bits (2135), Expect = 7.9e-236
Identity = 407/420 (96.90%), Postives = 414/420 (98.57%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFH LGAGTIEDVRVQRDKGFGFVRY THA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARV+CGKPIKCSWGSKPTPPGTNS PLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVLCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
            LSKMGAA+A+MHPQAAQHALKQAAMGMG+GIG+GGAGTSQT+YD GFQNIATTQQLMYY
Sbjct: 361 TLSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 1.4e-182
Identity = 323/424 (76.18%), Postives = 366/424 (86.32%), Query Frame = 0


Query: 36  MQYQRLR---QQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQV 95
           MQ QRL+   QQA+MQQSLY HPGLLA PQIEPILSGNLPPGFDSS CRSVYVGNIHPQV
Sbjct: 2   MQQQRLKQQQQQALMQQSLY-HPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQV 61

Query: 96  TEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNW 155
           TEPLLQEVF+S GP+EGCKLIRK+KSSYGFVDYFDRRSAA+AI++LNGR+LFGQPIKVNW
Sbjct: 62  TEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNW 121

Query: 156 AYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFV 215
           AYAS+QREDTS H+NIFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRG+GFV
Sbjct: 122 AYASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFV 181

Query: 216 AFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQ 275
           +FRN+Q+AQSAIND+NGKWLGSRQIRCNWA KGA +  + Q+SD++SVVELT+GTS+ GQ
Sbjct: 182 SFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGE-QNSDAKSVVELTSGTSDDGQ 241

Query: 276 EK-SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRY 335
           EK  NE+APENNPQYTTVYVGNLAPEVTSVDLHR+FH LGAG IEDVR+QRDKGFGFVRY
Sbjct: 242 EKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRY 301

Query: 336 GTHAEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAY 395
            +HAEAA AIQ+GNAR++ GKP+KCSWGSKPTPPG++S PLPPP +G +PGLSA DLAAY
Sbjct: 302 SSHAEAARAIQLGNARLLFGKPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAMDLAAY 361

Query: 396 ERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQ 455
           +RQ+AL+KM  A+A M PQ               G  IG  G  Q +YD G+  IA+TQ 
Sbjct: 362 QRQLALAKMAGAQAFMQPQ---------------GQRIGAPG--QGIYDGGYGGIASTQP 406

[Close]

BLAST of Carg18653 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 2.3e-177
Identity = 311/422 (73.70%), Postives = 349/422 (82.70%), Query Frame = 0


Query: 35  KMQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTE 94
           + Q Q + QQA+MQQ    HPGLLA PQIEPI SGNLPPGFD S CRSVYVGNIH QVTE
Sbjct: 8   QQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTE 67

Query: 95  PLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAY 154
           PLLQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA +AI+SLNGR+LFGQPIKVNWAY
Sbjct: 68  PLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAY 127

Query: 155 ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 214
           AS QREDTS HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+F
Sbjct: 128 ASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSF 187

Query: 215 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 274
           RN+QDAQ+AI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELT+G SE G++ 
Sbjct: 188 RNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDT 247

Query: 275 SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTH 334
           +N EAPENN QYTTVYVGNLAPEV+ VDLHR+FH+LGAG IE+VRVQRDKGFGFVRY TH
Sbjct: 248 TNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 307

Query: 335 AEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYER 394
            EAALAIQMGN    + G+ +KCSWGSKPTP GT S PLPPP    +PG SA+DL AYER
Sbjct: 308 VEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYER 367

Query: 395 QMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLM 454
           Q+A+SKM     +MH    QHA KQAAM        G  G++Q +YD G+QN    QQLM
Sbjct: 368 QLAMSKMAGMNPMMHHPQGQHAFKQAAM--------GATGSNQAIYDGGYQN---AQQLM 418

Query: 455 YY 456
           YY
Sbjct: 428 YY 418

[Close]

BLAST of Carg18653 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 6.6e-177
Identity = 309/429 (72.03%), Postives = 353/429 (82.28%), Query Frame = 0


Query: 28  IQSHSSWKMQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGN 87
           ++ H   + Q   ++QQA+MQQ    HPG+LA PQ+EP+ SGNLPPGFD S CRSVYVGN
Sbjct: 6   LKQHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGN 65

Query: 88  IHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQP 147
           IH QVTEPLLQE+F+S GP+E  KLIRK+KSSYGFV YFDRRSAA+AI+SLNGR+LFGQP
Sbjct: 66  IHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQP 125

Query: 148 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR 207
           IKVNWAYA+ QREDTS HFNIFVGDLSPEVTDATL+  FSV+ SCSDARVMWDQKTGRSR
Sbjct: 126 IKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSR 185

Query: 208 GYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGT 267
           G+GFV+FRN+QDAQ+AIN++NGKWL SRQIRCNWATKGA+SGDDK SSD +SVVELTTG+
Sbjct: 186 GFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGS 245

Query: 268 SEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFG 327
           SE G+E  NEE PENN Q+TTVYVGNLAPEVT +DLHRYFH LGAG IE+VRVQRDKGFG
Sbjct: 246 SEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFG 305

Query: 328 FVRYGTHAEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAA 387
           FVRY TH EAALAIQMGN +  +  + IKCSWG+KPTPPGT S PLPPP    +PGLSAA
Sbjct: 306 FVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAA 365

Query: 388 DLAAYERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNI 447
           DL  YERQ+ALSKM +  A+MH Q  QH L+QA        GI  AG +  +YD GFQN+
Sbjct: 366 DLLNYERQLALSKMASVNALMH-QQGQHPLRQAH-------GINAAGATAAMYDGGFQNV 425

Query: 448 ATTQQLMYY 456
           A  QQLMYY
Sbjct: 426 AAAQQLMYY 426

[Close]

BLAST of Carg18653 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 4.0e-166
Identity = 297/431 (68.91%), Postives = 350/431 (81.21%), Query Frame = 0


Query: 29  QSHSSWKMQYQRLRQQAMMQQ--SLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVG 88
           Q     +   Q + QQAMMQQ  SLY HPG++A PQ+EP+ SGNLPPGFD + CRSVY G
Sbjct: 10  QQQQQQQQHQQAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAG 69

Query: 89  NIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQ 148
           NIH QVTE LLQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A++AI++LNGR++FGQ
Sbjct: 70  NIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQ 129

Query: 149 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 208
           P+KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FS + SCSDARVMWDQKTGRS
Sbjct: 130 PMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRS 189

Query: 209 RGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTG 268
           RG+GFV+FRN+QDAQ+AIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT G
Sbjct: 190 RGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNG 249

Query: 269 TSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGF 328
           +SE G+E SNE+APENNPQ+TTVYVGNL+PEVT +DLHR F+TLGAG IE+VRVQRDKGF
Sbjct: 250 SSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGF 309

Query: 329 GFVRYGTHAEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSA 388
           GFVRY TH EAALAIQMGNA+  +  + I+CSWG+KPTP GT S PLPPP    +P LSA
Sbjct: 310 GFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSA 369

Query: 389 ADLAAYERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQN 448
            DL AYERQ+AL+K       MHPQ AQH+L+QA      G+G+  AG +  +YD G+QN
Sbjct: 370 MDLLAYERQLALAK-------MHPQ-AQHSLRQA------GLGVNVAGGTAAMYDGGYQN 425

Query: 449 IATT-QQLMYY 456
           +A   QQLMYY
Sbjct: 430 VAAAHQQLMYY 425

[Close]

BLAST of Carg18653 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.8e-143
Identity = 274/455 (60.22%), Postives = 330/455 (72.53%), Query Frame = 0


Query: 30  SHSSWKMQYQRLR----------QQAMMQQSLYPHPGLLAA------PQIEPILSGNLPP 89
           +H   + Q QRLR          QQA+ QQ  Y   G+LAA       Q+EPI +GNLPP
Sbjct: 7   NHQQQQQQQQRLRQQQQQQALLMQQALQQQQQY-QSGVLAAAAAAAMTQMEPISNGNLPP 66

Query: 90  GFDSSACRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV 149
           GFD S CRSVYVGN+HP VTE LL EVF S G +E CKLIRKEKSS+GFVDY+DRRSAA+
Sbjct: 67  GFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAAL 126

Query: 150 AIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 209
           AI++L+GR++ GQ IKVNWAYAS+QREDTSGHF+IFVGDLS EV DATL+ACFS YPSCS
Sbjct: 127 AIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCS 186

Query: 210 DARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQ 269
           DARVMWD KTGRSRGYGFV+FRN+Q+A++AI ++ GKWLGSRQIRCNWATK  ++ ++KQ
Sbjct: 187 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK--NNAEEKQ 246

Query: 270 SSDSRSVVELTTGTS-----EGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFH 329
            +D+ + V LT G+S     E  Q+  ++E PENNP  TTVYVGNL  EV   +LHR+F+
Sbjct: 247 ETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFY 306

Query: 330 TLGAGTIEDVRVQRDKGFGFVRYGTHAEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTN 389
            LG G IE+VRVQ+DKGFGFVRY  H EAALAIQM N  VV GKPIKCSWG+KPTPPGT+
Sbjct: 307 NLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPPGTS 366

Query: 390 SAPLPPPNVGHMP--------GLSAADLAAYERQMALSKMGAARAVMHPQAAQHALKQAA 449
           S PLPPP   + P        G SAAD+ AY+RQ+ LS++ A +      A QH L    
Sbjct: 367 SKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQI-----AGQHGLAGQ- 426

Query: 450 MGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 456
               +  G+  AG SQ LYD G+ N ++ QQLMYY
Sbjct: 427 ----VSAGLLAAG-SQALYD-GYPNQSSAQQLMYY 446

[Close]

BLAST of Carg18653 vs. ExPASy TrEMBL
Match: A0A6J1FBG1 (oligouridylate-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443912 PE=4 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 2.3e-241
Identity = 419/420 (99.76%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           ALSKMGAARA+MHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY
Sbjct: 361 ALSKMGAARALMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. ExPASy TrEMBL
Match: A0A6J1HQW3 (oligouridylate-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465315 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.1e-241
Identity = 418/420 (99.52%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           ALSKMGAARA+MHPQAAQHALKQAAMGMG+GIGIGGAGTSQTLYDSGFQNIATTQQLMYY
Sbjct: 361 ALSKMGAARALMHPQAAQHALKQAAMGMGMGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. ExPASy TrEMBL
Match: A0A6J1DM61 (oligouridylate-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021846 PE=4 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 3.8e-236
Identity = 407/420 (96.90%), Postives = 414/420 (98.57%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTTGTSEGGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTTGTSEGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFH LGAGTIEDVRVQRDKGFGFVRY THA
Sbjct: 241 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQMGNARV+CGKPIKCSWGSKPTPPGTNS PLPPPNVGHMPGLSAADLAAYERQM
Sbjct: 301 EAALAIQMGNARVLCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
            LSKMGAA+A+MHPQAAQHALKQAAMGMG+GIG+GGAGTSQT+YD GFQNIATTQQLMYY
Sbjct: 361 TLSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. ExPASy TrEMBL
Match: A0A5D3CHT1 (Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001510 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.1e-234
Identity = 402/420 (95.71%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELT+GTS+GGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NE+APENNPQYTTVYVGNLAPEVTSVDLHRYFH LGAGTIEDVRVQRDKGFGFVRY THA
Sbjct: 241 NEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQ GNARVVCGKPIKCSWGSKPTPPGTNS PLPPPNVGHMPGLSAADLA+YERQM
Sbjct: 301 EAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           A SKMGAA+A+MHPQAAQHALKQAAMGMG+GIG+GGAGTSQT+YD GFQNIATTQQLMYY
Sbjct: 361 AFSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. ExPASy TrEMBL
Match: A0A1S3CBS9 (oligouridylate-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103498989 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.1e-234
Identity = 402/420 (95.71%), Postives = 413/420 (98.33%), Query Frame = 0


Query: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 156 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 215
           SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR
Sbjct: 121 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 180

Query: 216 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 275
           NEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELT+GTS+GGQEKS
Sbjct: 181 NEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEKS 240

Query: 276 NEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTHA 335
           NE+APENNPQYTTVYVGNLAPEVTSVDLHRYFH LGAGTIEDVRVQRDKGFGFVRY THA
Sbjct: 241 NEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 300

Query: 336 EAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQM 395
           EAALAIQ GNARVVCGKPIKCSWGSKPTPPGTNS PLPPPNVGHMPGLSAADLA+YERQM
Sbjct: 301 EAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQM 360

Query: 396 ALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLMYY 455
           A SKMGAA+A+MHPQAAQHALKQAAMGMG+GIG+GGAGTSQT+YD GFQNIATTQQLMYY
Sbjct: 361 AFSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 420

[Close]

BLAST of Carg18653 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 623.2 bits (1606), Expect = 1.6e-178
Identity = 311/422 (73.70%), Postives = 349/422 (82.70%), Query Frame = 0


Query: 35  KMQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTE 94
           + Q Q + QQA+MQQ    HPGLLA PQIEPI SGNLPPGFD S CRSVYVGNIH QVTE
Sbjct: 8   QQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTE 67

Query: 95  PLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAY 154
           PLLQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA +AI+SLNGR+LFGQPIKVNWAY
Sbjct: 68  PLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAY 127

Query: 155 ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 214
           AS QREDTS HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+F
Sbjct: 128 ASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSF 187

Query: 215 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 274
           RN+QDAQ+AI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELT+G SE G++ 
Sbjct: 188 RNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDT 247

Query: 275 SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTH 334
           +N EAPENN QYTTVYVGNLAPEV+ VDLHR+FH+LGAG IE+VRVQRDKGFGFVRY TH
Sbjct: 248 TNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 307

Query: 335 AEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYER 394
            EAALAIQMGN    + G+ +KCSWGSKPTP GT S PLPPP    +PG SA+DL AYER
Sbjct: 308 VEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYER 367

Query: 395 QMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLM 454
           Q+A+SKM     +MH    QHA KQAAM        G  G++Q +YD G+QN    QQLM
Sbjct: 368 QLAMSKMAGMNPMMHHPQGQHAFKQAAM--------GATGSNQAIYDGGYQN---AQQLM 418

Query: 455 YY 456
           YY
Sbjct: 428 YY 418

[Close]

BLAST of Carg18653 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 621.7 bits (1602), Expect = 4.7e-178
Identity = 309/429 (72.03%), Postives = 353/429 (82.28%), Query Frame = 0


Query: 28  IQSHSSWKMQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGN 87
           ++ H   + Q   ++QQA+MQQ    HPG+LA PQ+EP+ SGNLPPGFD S CRSVYVGN
Sbjct: 6   LKQHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGN 65

Query: 88  IHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQP 147
           IH QVTEPLLQE+F+S GP+E  KLIRK+KSSYGFV YFDRRSAA+AI+SLNGR+LFGQP
Sbjct: 66  IHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQP 125

Query: 148 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR 207
           IKVNWAYA+ QREDTS HFNIFVGDLSPEVTDATL+  FSV+ SCSDARVMWDQKTGRSR
Sbjct: 126 IKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSR 185

Query: 208 GYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGT 267
           G+GFV+FRN+QDAQ+AIN++NGKWL SRQIRCNWATKGA+SGDDK SSD +SVVELTTG+
Sbjct: 186 GFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGS 245

Query: 268 SEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFG 327
           SE G+E  NEE PENN Q+TTVYVGNLAPEVT +DLHRYFH LGAG IE+VRVQRDKGFG
Sbjct: 246 SEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFG 305

Query: 328 FVRYGTHAEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAA 387
           FVRY TH EAALAIQMGN +  +  + IKCSWG+KPTPPGT S PLPPP    +PGLSAA
Sbjct: 306 FVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAA 365

Query: 388 DLAAYERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNI 447
           DL  YERQ+ALSKM +  A+MH Q  QH L+QA        GI  AG +  +YD GFQN+
Sbjct: 366 DLLNYERQLALSKMASVNALMH-QQGQHPLRQAH-------GINAAGATAAMYDGGFQNV 425

Query: 448 ATTQQLMYY 456
           A  QQLMYY
Sbjct: 426 AAAQQLMYY 426

[Close]

BLAST of Carg18653 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 615.1 bits (1585), Expect = 4.4e-176
Identity = 309/422 (73.22%), Postives = 347/422 (82.23%), Query Frame = 0


Query: 35  KMQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTE 94
           + Q Q + QQA+MQQ    HPGLLA PQIEPI SGNLPPGFD S CRSVYVGNIH QVTE
Sbjct: 8   QQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTE 67

Query: 95  PLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAY 154
           PLLQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA +AI+SLNGR+LFGQPIKVNWAY
Sbjct: 68  PLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAY 127

Query: 155 ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 214
           AS QREDTS HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+F
Sbjct: 128 ASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSF 187

Query: 215 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 274
           RN+QDAQ+AI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELT+G    G++ 
Sbjct: 188 RNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG---DGKDT 247

Query: 275 SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTH 334
           +N EAPENN QYTTVYVGNLAPEV+ VDLHR+FH+LGAG IE+VRVQRDKGFGFVRY TH
Sbjct: 248 TNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 307

Query: 335 AEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYER 394
            EAALAIQMGN    + G+ +KCSWGSKPTP GT S PLPPP    +PG SA+DL AYER
Sbjct: 308 VEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYER 367

Query: 395 QMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQNIATTQQLM 454
           Q+A+SKM     +MH    QHA KQAAM        G  G++Q +YD G+QN    QQLM
Sbjct: 368 QLAMSKMAGMNPMMHHPQGQHAFKQAAM--------GATGSNQAIYDGGYQN---AQQLM 415

Query: 455 YY 456
           YY
Sbjct: 428 YY 415

[Close]

BLAST of Carg18653 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 585.9 bits (1509), Expect = 2.8e-167
Identity = 297/431 (68.91%), Postives = 350/431 (81.21%), Query Frame = 0


Query: 29  QSHSSWKMQYQRLRQQAMMQQ--SLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVG 88
           Q     +   Q + QQAMMQQ  SLY HPG++A PQ+EP+ SGNLPPGFD + CRSVY G
Sbjct: 10  QQQQQQQQHQQAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAG 69

Query: 89  NIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQ 148
           NIH QVTE LLQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A++AI++LNGR++FGQ
Sbjct: 70  NIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQ 129

Query: 149 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 208
           P+KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FS + SCSDARVMWDQKTGRS
Sbjct: 130 PMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRS 189

Query: 209 RGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTG 268
           RG+GFV+FRN+QDAQ+AIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT G
Sbjct: 190 RGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNG 249

Query: 269 TSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGF 328
           +SE G+E SNE+APENNPQ+TTVYVGNL+PEVT +DLHR F+TLGAG IE+VRVQRDKGF
Sbjct: 250 SSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGF 309

Query: 329 GFVRYGTHAEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSA 388
           GFVRY TH EAALAIQMGNA+  +  + I+CSWG+KPTP GT S PLPPP    +P LSA
Sbjct: 310 GFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSA 369

Query: 389 ADLAAYERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDSGFQN 448
            DL AYERQ+AL+K       MHPQ AQH+L+QA      G+G+  AG +  +YD G+QN
Sbjct: 370 MDLLAYERQLALAK-------MHPQ-AQHSLRQA------GLGVNVAGGTAAMYDGGYQN 425

Query: 449 IATT-QQLMYY 456
           +A   QQLMYY
Sbjct: 430 VAAAHQQLMYY 425

[Close]

BLAST of Carg18653 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 580.1 bits (1494), Expect = 1.6e-165
Identity = 297/435 (68.28%), Postives = 350/435 (80.46%), Query Frame = 0


Query: 29  QSHSSWKMQYQRLRQQAMMQQ--SLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVG 88
           Q     +   Q + QQAMMQQ  SLY HPG++A PQ+EP+ SGNLPPGFD + CRSVY G
Sbjct: 10  QQQQQQQQHQQAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAG 69

Query: 89  NIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQ 148
           NIH QVTE LLQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A++AI++LNGR++FGQ
Sbjct: 70  NIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQ 129

Query: 149 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS----DARVMWDQK 208
           P+KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FS + SCS    DARVMWDQK
Sbjct: 130 PMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQK 189

Query: 209 TGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVE 268
           TGRSRG+GFV+FRN+QDAQ+AIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVE
Sbjct: 190 TGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVE 249

Query: 269 LTTGTSEGGQEKSNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQR 328
           LT G+SE G+E SNE+APENNPQ+TTVYVGNL+PEVT +DLHR F+TLGAG IE+VRVQR
Sbjct: 250 LTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQR 309

Query: 329 DKGFGFVRYGTHAEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMP 388
           DKGFGFVRY TH EAALAIQMGNA+  +  + I+CSWG+KPTP GT S PLPPP    +P
Sbjct: 310 DKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVP 369

Query: 389 GLSAADLAAYERQMALSKMGAARAVMHPQAAQHALKQAAMGMGIGIGIGGAGTSQTLYDS 448
            LSA DL AYERQ+AL+K       MHPQ AQH+L+QA      G+G+  AG +  +YD 
Sbjct: 370 SLSAMDLLAYERQLALAK-------MHPQ-AQHSLRQA------GLGVNVAGGTAAMYDG 429

Query: 449 GFQNIATT-QQLMYY 456
           G+QN+A   QQLMYY
Sbjct: 430 GYQNVAAAHQQLMYY 429

The following BLAST results are available for this feature:

BLAST of Carg18653 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021360.1	1.9e-261	100.00	Oligouridylate-binding protein 1, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022937527.1	4.8e-241	99.76	oligouridylate-binding protein 1-like [Cucurbita moschata]	[more]
XP_022965399.1	1.1e-240	99.52	oligouridylate-binding protein 1-like [Cucurbita maxima]	[more]
XP_023538357.1	5.3e-240	99.29	oligouridylate-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022154627.1	7.9e-236	96.90	oligouridylate-binding protein 1-like isoform X2 [Momordica charantia]	[more]

BLAST of Carg18653 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M427	1.4e-182	76.18	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q9LQI9	2.3e-177	73.70	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	6.6e-177	72.03	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9SYG4	4.0e-166	68.91	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q6YZW2	2.8e-143	60.22	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of Carg18653 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBG1	2.3e-241	99.76	oligouridylate-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1HQW3	5.1e-241	99.52	oligouridylate-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11146531...	[more]
A0A6J1DM61	3.8e-236	96.90	oligouridylate-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A5D3CHT1	6.1e-234	95.71	Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CBS9	6.1e-234	95.71	oligouridylate-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103498989 PE...	[more]

BLAST of Carg18653 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	1.6e-178	73.70	oligouridylate binding protein 1B	[more]
AT3G14100.1	4.7e-178	72.03	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G17370.2	4.4e-176	73.22	oligouridylate binding protein 1B	[more]
AT1G54080.1	2.8e-167	68.91	oligouridylate-binding protein 1A	[more]
AT1G54080.2	1.6e-165	68.28	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 288..357 e-value: 3.7E-17 score: 73.0 coord: 82..151 e-value: 2.7E-18 score: 76.8 coord: 167..240 e-value: 1.4E-23 score: 94.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 168..238 e-value: 7.3E-18 score: 64.2 coord: 83..149 e-value: 4.7E-15 score: 55.2 coord: 289..355 e-value: 6.6E-11 score: 41.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 81..155 score: 15.732639
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 287..361 score: 14.811647
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 166..244 score: 17.233515
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 167..240 e-value: 4.9E-5 score: 32.7 coord: 288..357 e-value: 11.0 score: 3.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 161..259 e-value: 1.3E-26 score: 95.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 265..365 e-value: 3.4E-23 score: 83.7 coord: 75..160 e-value: 5.6E-21 score: 76.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..284
None	No IPR available	PANTHER	PTHR47640:SF40	NUCLEOLYSIN TIAR-LIKE PROTEIN	coord: 39..444
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 39..444
None	No IPR available	CDD	cd12354	RRM3_TIA1_like	coord: 287..361 e-value: 1.87917E-34 score: 121.574
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 83..153 e-value: 5.15081E-38 score: 130.886
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 167..241 e-value: 5.58538E-52 score: 167.684
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 159..255
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 70..159
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 279..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18653-RA	Carg18653-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding