Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATCTGTGCGCGGTTGATTCGGTTGTTAATTTATTTTCGTCGTTCCCTCCGGTTTTGTCTCGGCTTATCTTTTTCGATTTTCTCTCTCATTCCGTCTATTGTTGATGTTTTCGCTTGTAGGATGGGGATCACCGATGCACTCGAGAGTACAACCGCCTTGGATAGCTCGTCAACCGCCGTGGATGCCAGCCGGTTCCTTCGTAGGAGACCGAGTGCTACAACTGGTGGAGACGAGTACGATAAAAATTTGAGGCCGAACATTCGTGGAAGTGATAGTTCGCCTCCGGATCATGCAAGTTTTAATGGTTTATTGGCTGCAAAGAGCTCTGAGGAGGTTAAGGATCGAAATGACGCTATTGAAAATCCAAATCTAATGGAACCGGAGAAGGATCCGGTGACGAGGCCGAGAGTCGAGGTAACGCTTTTGATGTTTACGCTGTGAAATTTACGTATCGGCCGACGAGCCTCTGAGCTCTGTTGCGATACTCAGAGAAGTATGTTGAAATTCTTGGTTTATTTTAGCTGTCATATTATTGAACTCGCCATTACATTCGTATATACATCCGTTTTTCCTATTAGATATCATAAGTAGTCACAAACTGGATAGCTGGAAATATTAAACGACTATCTGAGGTCGATTTTCTGTTTCTTAAGTGAAATTATGCTTTGGCCGACTGCTTATCGAAGGAATTTTTCTGTGATGGAATATTTGTTCAAACTATCTTGAAATGTCATCAAGTATACTATACACTCGTAAAACTATGGCTAACACGCCTTGTTATTTCTGGCTTAAGTTTTAGATCAGATCTGATGGTTAATGCATATATAATGCTCACCATTTTATTCACTTTAAATGACAGAGCCACGCAGATCTGTTTAACCTCTGTATAGTAGTGCTTGTTGCTGTAAACAGCAGACTATCTGTATATTTCGTTTGCTACTAAAATAAGATTTATAAGCCGTTATTAATTTATTAGCATATGTATTCAAAATTGTTAACTGACATAGGAAATGCCTTTCTTGCTCGTGCAGCCTCTCCCTGTATTCTCCCTTTCTTCTTTTCTTGTTGAGAAGATGGCCATGCAGAAACATATGTTTGAGCCTGTAAGTTTTCTTAGTTAATTCTCTGGGAAATTTTCTCAAGATGGATTCCAACTGTGTATATGATTGTTTTCTTTACTTTTTTCAGGGTAATAATTGTTCCTTCGGATGGATTTCAACTGTGTATATAATAACTAGACGCTTACTGACTGAAATTGTAATTATAACCACTGTTGCAGTTCTCCATCCAGTTTTCATGATTCTCAGGTCAGTTAAGGTACTTCGCACACAATATTTTAGGAGGATTATCAGCTGAGTGATGTTAGACAATTTCTAGCTTTATTTATAGATTGCTACTCATGTTTTTAACATGTTGAAATTGCTTACATAATGTTATTGTATATTTTTAATGTCAACATAAGCCTTATGGAGAGGTAGAATGAACCATGCTGACTTTAAGCAGACAGTTCATTATTGATATTTTATGCATAGTTCTCTTGCAATTTC
mRNA sequence
CCATCTGTGCGCGGTTGATTCGGTTGTTAATTTATTTTCGTCGTTCCCTCCGGTTTTGTCTCGGCTTATCTTTTTCGATTTTCTCTCTCATTCCGTCTATTGTTGATGTTTTCGCTTGTAGGATGGGGATCACCGATGCACTCGAGAGTACAACCGCCTTGGATAGCTCGTCAACCGCCGTGGATGCCAGCCGGTTCCTTCGTAGGAGACCGAGTGCTACAACTGGTGGAGACGAGTACGATAAAAATTTGAGGCCGAACATTCGTGGAAGTGATAGTTCGCCTCCGGATCATGCAAGTTTTAATGGTTTATTGGCTGCAAAGAGCTCTGAGGAGGTTAAGGATCGAAATGACGCTATTGAAAATCCAAATCTAATGGAACCGGAGAAGGATCCGGTGACGAGGCCGAGAGTCGAGCCTCTCCCTGTATTCTCCCTTTCTTCTTTTCTTGTTGAGAAGATGGCCATGCAGAAACATATGTTTGAGCCTGGTAATAATTGTTCCTTCGGATGGATTTCAACTGTGTATATAATAACTAGACGCTTACTGACTGAAATTGTAATTATAACCACTGTTGCAGTTCTCCATCCAGTTTTCATGATTCTCAGGTCAGTTAAGGTACTTCGCACACAATATTTTAGGAGGATTATCAGCTGAGTGATGTTAGACAATTTCTAGCTTTATTTATAGATTGCTACTCATGTTTTTAACATGTTGAAATTGCTTACATAATGTTATTGTATATTTTTAATGTCAACATAAGCCTTATGGAGAGGTAGAATGAACCATGCTGACTTTAAGCAGACAGTTCATTATTGATATTTTATGCATAGTTCTCTTGCAATTTC
Coding sequence (CDS)
ATGGGGATCACCGATGCACTCGAGAGTACAACCGCCTTGGATAGCTCGTCAACCGCCGTGGATGCCAGCCGGTTCCTTCGTAGGAGACCGAGTGCTACAACTGGTGGAGACGAGTACGATAAAAATTTGAGGCCGAACATTCGTGGAAGTGATAGTTCGCCTCCGGATCATGCAAGTTTTAATGGTTTATTGGCTGCAAAGAGCTCTGAGGAGGTTAAGGATCGAAATGACGCTATTGAAAATCCAAATCTAATGGAACCGGAGAAGGATCCGGTGACGAGGCCGAGAGTCGAGCCTCTCCCTGTATTCTCCCTTTCTTCTTTTCTTGTTGAGAAGATGGCCATGCAGAAACATATGTTTGAGCCTGGTAATAATTGTTCCTTCGGATGGATTTCAACTGTGTATATAATAACTAGACGCTTACTGACTGAAATTGTAATTATAACCACTGTTGCAGTTCTCCATCCAGTTTTCATGATTCTCAGGTCAGTTAAGGTACTTCGCACACAATATTTTAGGAGGATTATCAGCTGA
Protein sequence
MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASFNGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMFEPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKVLRTQYFRRIIS
Homology
BLAST of Carg18624 vs. NCBI nr
Match:
KAG7021331.1 (hypothetical protein SDJN02_18020 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF
Sbjct: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF 120
NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF
Sbjct: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF 120
Query: 121 EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKVLRTQYFRRIIS 178
EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKVLRTQYFRRIIS
Sbjct: 121 EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKVLRTQYFRRIIS 177
BLAST of Carg18624 vs. NCBI nr
Match:
KAG6586474.1 (hypothetical protein SDJN03_19207, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 307.8 bits (787), Expect = 6.2e-80
Identity = 165/174 (94.83%), Postives = 165/174 (94.83%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
MGITD LESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF
Sbjct: 47 MGITDVLESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 106
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVE--------PLPVFSLSSFLVEK 120
NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVE PLPVFSLSSFLVEK
Sbjct: 107 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEEMPFLLVQPLPVFSLSSFLVEK 166
Query: 121 MAMQKHMFEPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKV 167
MAMQKHMFEPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKV
Sbjct: 167 MAMQKHMFEPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILRSVKV 220
BLAST of Carg18624 vs. NCBI nr
Match:
XP_022965954.1 (uncharacterized protein LOC111465677 isoform X2 [Cucurbita maxima])
HSP 1 Score: 231.1 bits (588), Expect = 7.4e-57
Identity = 130/162 (80.25%), Postives = 131/162 (80.86%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M ITDALESTTALDSS T +DASRFLRRRPSATTGGDEYDKNLR NIRGSDSSPPDHASF
Sbjct: 23 MAITDALESTTALDSSLTVLDASRFLRRRPSATTGGDEYDKNLRTNIRGSDSSPPDHASF 82
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF 120
NGLLAAKSSEEVKDRNDAIENPNLMEPEKD VTRPRVE
Sbjct: 83 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDRVTRPRVE---------------------- 142
Query: 121 EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILR 163
GNNCSFGWIS VYIITRRLLTEIVIITTVAV HPVFMILR
Sbjct: 143 --GNNCSFGWISIVYIITRRLLTEIVIITTVAVFHPVFMILR 160
BLAST of Carg18624 vs. NCBI nr
Match:
XP_022965953.1 (uncharacterized protein LOC111465677 isoform X1 [Cucurbita maxima])
HSP 1 Score: 231.1 bits (588), Expect = 7.4e-57
Identity = 130/162 (80.25%), Postives = 131/162 (80.86%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M ITDALESTTALDSS T +DASRFLRRRPSATTGGDEYDKNLR NIRGSDSSPPDHASF
Sbjct: 56 MAITDALESTTALDSSLTVLDASRFLRRRPSATTGGDEYDKNLRTNIRGSDSSPPDHASF 115
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF 120
NGLLAAKSSEEVKDRNDAIENPNLMEPEKD VTRPRVE
Sbjct: 116 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDRVTRPRVE---------------------- 175
Query: 121 EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILR 163
GNNCSFGWIS VYIITRRLLTEIVIITTVAV HPVFMILR
Sbjct: 176 --GNNCSFGWISIVYIITRRLLTEIVIITTVAVFHPVFMILR 193
BLAST of Carg18624 vs. NCBI nr
Match:
XP_022999466.1 (diacylglycerol O-acyltransferase 1A [Cucurbita maxima] >XP_022999467.1 diacylglycerol O-acyltransferase 1A [Cucurbita maxima] >XP_022999468.1 diacylglycerol O-acyltransferase 1A [Cucurbita maxima])
HSP 1 Score: 110.9 bits (276), Expect = 1.1e-20
Identity = 62/109 (56.88%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M I D LESTT +SS + +DA+RFLRRRP ATT G E + NLRPN+RG+DSSPPDHA
Sbjct: 1 MAIADMLESTTPSESSLSDLDATRFLRRRPGATTAGVESETNLRPNVRGTDSSPPDHAGV 60
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFL 110
NGL AAK EE DRN A++NPNL E KDP + F +SS +
Sbjct: 61 NGLSAAKRCEEDIDRNCAVQNPNLTETAKDPGDKAESRGNAKFDVSSVI 109
BLAST of Carg18624 vs. ExPASy TrEMBL
Match:
A0A6J1HSC3 (uncharacterized protein LOC111465677 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465677 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 3.6e-57
Identity = 130/162 (80.25%), Postives = 131/162 (80.86%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M ITDALESTTALDSS T +DASRFLRRRPSATTGGDEYDKNLR NIRGSDSSPPDHASF
Sbjct: 23 MAITDALESTTALDSSLTVLDASRFLRRRPSATTGGDEYDKNLRTNIRGSDSSPPDHASF 82
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF 120
NGLLAAKSSEEVKDRNDAIENPNLMEPEKD VTRPRVE
Sbjct: 83 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDRVTRPRVE---------------------- 142
Query: 121 EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILR 163
GNNCSFGWIS VYIITRRLLTEIVIITTVAV HPVFMILR
Sbjct: 143 --GNNCSFGWISIVYIITRRLLTEIVIITTVAVFHPVFMILR 160
BLAST of Carg18624 vs. ExPASy TrEMBL
Match:
A0A6J1HQG6 (uncharacterized protein LOC111465677 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465677 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 3.6e-57
Identity = 130/162 (80.25%), Postives = 131/162 (80.86%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M ITDALESTTALDSS T +DASRFLRRRPSATTGGDEYDKNLR NIRGSDSSPPDHASF
Sbjct: 56 MAITDALESTTALDSSLTVLDASRFLRRRPSATTGGDEYDKNLRTNIRGSDSSPPDHASF 115
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFLVEKMAMQKHMF 120
NGLLAAKSSEEVKDRNDAIENPNLMEPEKD VTRPRVE
Sbjct: 116 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDRVTRPRVE---------------------- 175
Query: 121 EPGNNCSFGWISTVYIITRRLLTEIVIITTVAVLHPVFMILR 163
GNNCSFGWIS VYIITRRLLTEIVIITTVAV HPVFMILR
Sbjct: 176 --GNNCSFGWISIVYIITRRLLTEIVIITTVAVFHPVFMILR 193
BLAST of Carg18624 vs. ExPASy TrEMBL
Match:
A0A6J1KJS9 (O-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111493820 PE=3 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 5.4e-21
Identity = 62/109 (56.88%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M I D LESTT +SS + +DA+RFLRRRP ATT G E + NLRPN+RG+DSSPPDHA
Sbjct: 1 MAIADMLESTTPSESSLSDLDATRFLRRRPGATTAGVESETNLRPNVRGTDSSPPDHAGV 60
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFL 110
NGL AAK EE DRN A++NPNL E KDP + F +SS +
Sbjct: 61 NGLSAAKRCEEDIDRNCAVQNPNLTETAKDPGDKAESRGNAKFDVSSVI 109
BLAST of Carg18624 vs. ExPASy TrEMBL
Match:
A0A6J1G356 (O-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111450373 PE=3 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 9.2e-21
Identity = 63/109 (57.80%), Postives = 73/109 (66.97%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRPSATTGGDEYDKNLRPNIRGSDSSPPDHASF 60
M I D LESTT +SS + +DASRFLRRRP ATT G E + NLRPN+RG+DSSPPDHA
Sbjct: 1 MAIADMLESTTPSESSLSDLDASRFLRRRPGATTAGVESETNLRPNVRGTDSSPPDHAGA 60
Query: 61 NGLLAAKSSEEVKDRNDAIENPNLMEPEKDPVTRPRVEPLPVFSLSSFL 110
NGL AAK EE DRN A +NPNL E KDP + F +SS +
Sbjct: 61 NGLSAAKRCEEDIDRNYAAQNPNLTETAKDPGDKAESRGNAKFDVSSVI 109
BLAST of Carg18624 vs. ExPASy TrEMBL
Match:
A0A5D3CKN1 (O-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001040 PE=3 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 94/248 (37.90%), Postives = 109/248 (43.95%), Query Frame = 0
Query: 1 MGITDALESTTALDSSSTAVDASRFLRRRP-SATTGGDEYDKNLRPNIRGSDSSPPDHAS 60
M I D LESTT DSS + +DA+RFLRRRP SATT G E D RP+IRG+ +SPPDHA+
Sbjct: 44 MAIADTLESTTPSDSSLSDLDATRFLRRRPTSATTAGTESDTIFRPDIRGTHTSPPDHAA 103
Query: 61 FNGLLAAKSSEEVKDRNDAIENPNLMEPEK------------------------------ 120
NGL AK +E DRNDA+ENPNL+E EK
Sbjct: 104 VNGLSPAKRFQEDNDRNDAVENPNLIETEKVSGEMAESRGEANSDVSAVKFAYRPSAPAH 163
Query: 121 ----------DPVTR-------------------------------------PRV----- 163
D + R P V
Sbjct: 164 RRVKESPLSSDAIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKFKILARLATPNVLAMPR 223
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021331.1 | 1.3e-88 | 100.00 | hypothetical protein SDJN02_18020 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6586474.1 | 6.2e-80 | 94.83 | hypothetical protein SDJN03_19207, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022965954.1 | 7.4e-57 | 80.25 | uncharacterized protein LOC111465677 isoform X2 [Cucurbita maxima] | [more] |
XP_022965953.1 | 7.4e-57 | 80.25 | uncharacterized protein LOC111465677 isoform X1 [Cucurbita maxima] | [more] |
XP_022999466.1 | 1.1e-20 | 56.88 | diacylglycerol O-acyltransferase 1A [Cucurbita maxima] >XP_022999467.1 diacylgly... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HSC3 | 3.6e-57 | 80.25 | uncharacterized protein LOC111465677 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HQG6 | 3.6e-57 | 80.25 | uncharacterized protein LOC111465677 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1KJS9 | 5.4e-21 | 56.88 | O-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111493820 PE=3 SV=1 | [more] |
A0A6J1G356 | 9.2e-21 | 57.80 | O-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111450373 PE=3 SV=1 | [more] |
A0A5D3CKN1 | 1.1e-18 | 37.90 | O-acyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00... | [more] |
Match Name | E-value | Identity | Description | |