Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGAATCAGAGGCGGATGATCTCGATTATACGATTCTCGATCTCACAAGCTTTGTGGTCCACGATCTCGACTACATCCGAGTTGCCTTCGAGTTTAACGGAATTGGACCTGACGGAAAATCGACTTTCGAGTTTTGATTCTCGGATTAGAGAGGTCTAGAACCTGAAGCAGCTCTCTCTTAGTCAGAACTTTATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGTGCGCACTGTCAGGTCTCGAGGTATTCAATCGTTCACTTCGTCGCGTTCAGTTTTAGAAAAGTGTTCCAGAAATGGCCGAATCTTGCTTCGCATTACAGTTTTATAGAGATATTTGGTTTCTTTTTCTGTCTGAATGTGTACAGTGTGAGTCCTGAAGCGATTCTCGGATAGAGAGGTCTAGAACCTGAAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGCGCGCACTGTCAGGTCTCGAGGTATTCAATAGTTCACTTCGTCGCGTTCAGTTTTAGAAGAGTGTTAGAGAAATGGCCGAATCTTGCTTCGCATTACAGTTTTATAGAGATATTTGGTTTCTTTGCTGTCTGAATGTGTACAGTGTGAGTCCTAAAGCGATTCTCGGATTAGAGAGGTCGAGAACCTGAAGAAGGTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGAGCGCACATGTCAGGTCTCGAGGTATTCAATCGTTCACTTCGTTGCGTTCAGTTTTAGAAAAGTGTTAGAGAAATGGCCGAATCTTGCTTCGCATTACAGTTTTATAGAGATATTTGGTTTCTTTGCTGTCTGACTTTGTACAGTGCGAGTCCTAAAGCGATTCTCGGATTAGAGAGGTCTAGAACCTGTAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGATTTCTTGCTGGAGCGCACTGTCAGGTCTCGAGGTATTCAATAGTTCACTTCGTCGCGTTCAGTTTTAGAAAAGTGTTAGAGAAATGGCCGAATCTTGCTTCGCATTACAGTTTTATAGAGATATTTGGTTTCTTTGCTGTCTGAAAGTGTACAGTGTGAGTCCTAAAGCGATTCTCGGATTAGAGAGGTCTAGAACCTGAAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACCGGCTGAATCGCTTTCTCGCTGGAGCGCACATGTCAGGTCTCGAGGTATTCAATCGTTCACTTCGTCGCGTTCAGTTTTAGAAAAGTGTTCCAGAATTGGCCGAATCTTGCTTCGCACTACAGTTTTATAGAGCTATTTTCGCTTTGTTTCTTTTGCTGTCTGAATGTGTACAGTGTGAGTCCTAAAGCTATATCTATATTCTTACGTCGTTCGGTGATTGTTTTCACTTAAATCACATCATCGAAAGCGTAGCCCGATGATTCTTAAAGTGATAGAACTCCAGAATAGTGCAAGACCGTGCTATTTTTATCTTCGTTATTTTATATGACTTTAATCTTAGAGACGATAAAATGACGAAAATACCTGATGCGAGCATATTCAAGAGGCTTTAG
mRNA sequence
CTGAATCAGAGGCGGATGATCTCGATTATACGATTCTCGATCTCACAAGCTTTGTGGTCCACGATCTCGACTACATCCGAGTTGCCTTCGAGTTTAACGGAATTGGACCTGACGGAAAATCGACTTTCGAGTTTTGATTCTCGGATTAGAGAGAACCTGAAGCAGCTCTCTCTTAGTCAGAACTTTATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGTGCGCACTGTCAGGTCTCGAGAACCTGAAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGCGCGCACTGTCAGGTCTCGAGGTCGAGAACCTGAAGAAGGTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGAGCGCACATGTCAGTGCGAGTCCTAAAGCGATTCTCGGATTAGAGAGGTCTAGAACCTGTAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGATTTCTTGCTGGAGCGCACTGTCAGGTCTCGAGAGACGATAAAATGACGAAAATACCTGATGCGAGCATATTCAAGAGGCTTTAG
Coding sequence (CDS)
CTGAATCAGAGGCGGATGATCTCGATTATACGATTCTCGATCTCACAAGCTTTGTGGTCCACGATCTCGACTACATCCGAGTTGCCTTCGAGTTTAACGGAATTGGACCTGACGGAAAATCGACTTTCGAGTTTTGATTCTCGGATTAGAGAGAACCTGAAGCAGCTCTCTCTTAGTCAGAACTTTATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGTGCGCACTGTCAGGTCTCGAGAACCTGAAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGCGCGCACTGTCAGGTCTCGAGGTCGAGAACCTGAAGAAGGTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGCTTTCTCGCTGGAGCGCACATGTCAGTGCGAGTCCTAAAGCGATTCTCGGATTAGAGAGGTCTAGAACCTGTAGAAGCTCTCTCTTCGTCAGAACCTCATCAATGATGCTACGGCTGAATCGATTTCTTGCTGGAGCGCACTGTCAGGTCTCGAGAGACGATAAAATGACGAAAATACCTGATGCGAGCATATTCAAGAGGCTTTAG
Protein sequence
LNQRRMISIIRFSISQALWSTISTTSELPSSLTELDLTENRLSSFDSRIRENLKQLSLSQNFINDATAESLSRWCALSGLENLKKLSLRQNLINDATAESLSRWRALSGLEVENLKKVSLRQNLINDATAESLSRWSAHVSASPKAILGLERSRTCRSSLFVRTSSMMLRLNRFLAGAHCQVSRDDKMTKIPDASIFKRL
Homology
BLAST of Carg18593 vs. NCBI nr
Match:
XP_022154721.1 (protein phosphatase 1 regulatory subunit pprA [Momordica charantia] >XP_022154723.1 protein phosphatase 1 regulatory subunit pprA [Momordica charantia] >XP_022154724.1 protein phosphatase 1 regulatory subunit pprA [Momordica charantia])
HSP 1 Score: 83.2 bits (204), Expect = 2.8e-12
Identity = 50/73 (68.49%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSLTELDLT NRLSS DSRI E NLK+LS+ QN INDA AESLSRW ALSGLE L
Sbjct: 43 ELPSSLTELDLTANRLSSLDSRIGELSNLKKLSIRQNLINDAAAESLSRWNALSGLEELV 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. NCBI nr
Match:
XP_023547162.1 (protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita pepo subsp. pepo] >XP_023547163.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita pepo subsp. pepo])
HSP 1 Score: 80.1 bits (196), Expect = 2.4e-11
Identity = 49/73 (67.12%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSL ELDLT NRLSS DSRI E NLK+LSL QN INDA ESLSRW ALSGLE L
Sbjct: 43 ELPSSLMELDLTANRLSSLDSRIGELSNLKKLSLRQNLINDAAVESLSRWNALSGLEELV 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. NCBI nr
Match:
XP_022946403.1 (protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita moschata])
HSP 1 Score: 79.7 bits (195), Expect = 3.1e-11
Identity = 49/73 (67.12%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSL ELDLT NRLSS DSRI E NLK+LSL QN INDA ESLSRW ALSGLE L
Sbjct: 43 ELPSSLMELDLTANRLSSLDSRIGELSNLKKLSLRQNLINDAAVESLSRWNALSGLEELI 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. NCBI nr
Match:
KAG6599471.1 (Protein phosphatase 1 regulatory inhibitor subunit PPP1R7-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030449.1 Protein phosphatase 1 regulatory subunit pprA [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 79.7 bits (195), Expect = 3.1e-11
Identity = 49/73 (67.12%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSL ELDLT NRLSS DSRI E NLK+LSL QN INDA ESLSRW ALSGLE L
Sbjct: 43 ELPSSLMELDLTANRLSSLDSRIGELSNLKKLSLRQNLINDAAVESLSRWNALSGLEELI 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. NCBI nr
Match:
XP_022999515.1 (protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita maxima])
HSP 1 Score: 79.7 bits (195), Expect = 3.1e-11
Identity = 49/73 (67.12%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSL ELDLT NRLSS DSRI E NLK+LSL QN INDA ESLSRW ALSGLE L
Sbjct: 43 ELPSSLMELDLTANRLSSLDSRIGELSNLKKLSLRQNLINDAAVESLSRWNALSGLEELI 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. ExPASy Swiss-Prot
Match:
Q84WJ9 (Protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g19680 PE=1 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 6.8e-09
Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 0
Query: 25 TSELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLEN 84
T ELP +L ELDLT NRLS DSRI + LK+LSL QN I+D+ E LS W ALS LE
Sbjct: 32 TVELPPNLIELDLTANRLSGLDSRIAQLSTLKKLSLRQNLIDDSAVEPLSHWDALSDLEE 91
BLAST of Carg18593 vs. ExPASy TrEMBL
Match:
A0A6J1DN03 (protein phosphatase 1 regulatory subunit pprA OS=Momordica charantia OX=3673 GN=LOC111021907 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12
Identity = 50/73 (68.49%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSLTELDLT NRLSS DSRI E NLK+LS+ QN INDA AESLSRW ALSGLE L
Sbjct: 43 ELPSSLTELDLTANRLSSLDSRIGELSNLKKLSIRQNLINDAAAESLSRWNALSGLEELV 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. ExPASy TrEMBL
Match:
A0A6J1KFL4 (protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493850 PE=4 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 1.5e-11
Identity = 49/73 (67.12%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSL ELDLT NRLSS DSRI E NLK+LSL QN INDA ESLSRW ALSGLE L
Sbjct: 43 ELPSSLMELDLTANRLSSLDSRIGELSNLKKLSLRQNLINDAAVESLSRWNALSGLEELI 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. ExPASy TrEMBL
Match:
A0A6J1G3P9 (protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450470 PE=4 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 1.5e-11
Identity = 49/73 (67.12%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSL ELDLT NRLSS DSRI E NLK+LSL QN INDA ESLSRW ALSGLE L
Sbjct: 43 ELPSSLMELDLTANRLSSLDSRIGELSNLKKLSLRQNLINDAAVESLSRWNALSGLEELI 102
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 103 LRDNQMTKIPDAS 115
BLAST of Carg18593 vs. ExPASy TrEMBL
Match:
A0A5D3CKJ2 (Protein phosphatase 1 regulatory subunit pprA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00500 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 2.2e-10
Identity = 46/73 (63.01%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSLTELDLT NRL++ D RI E NLK+LSL QN IN+A ESLSRW ALSGLE L
Sbjct: 37 ELPSSLTELDLTANRLTNLDPRIGELSNLKKLSLRQNLINNAAVESLSRWNALSGLEELI 96
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 97 LRDNQMTKIPDAS 109
BLAST of Carg18593 vs. ExPASy TrEMBL
Match:
A0A5A7V2Q2 (Protein phosphatase 1 regulatory subunit pprA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00950 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 2.2e-10
Identity = 46/73 (63.01%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 27 ELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLENLK 86
ELPSSLTELDLT NRL++ D RI E NLK+LSL QN IN+A ESLSRW ALSGLE L
Sbjct: 37 ELPSSLTELDLTANRLTNLDPRIGELSNLKKLSLRQNLINNAAVESLSRWNALSGLEELI 96
Query: 87 KLSLRQNLINDAT 98
+ I DA+
Sbjct: 97 LRDNQMTKIPDAS 109
BLAST of Carg18593 vs. TAIR 10
Match:
AT5G19680.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 0
Query: 25 TSELPSSLTELDLTENRLSSFDSRIRE--NLKQLSLSQNFINDATAESLSRWCALSGLEN 84
T ELP +L ELDLT NRLS DSRI + LK+LSL QN I+D+ E LS W ALS LE
Sbjct: 32 TVELPPNLIELDLTANRLSGLDSRIAQLSTLKKLSLRQNLIDDSAVEPLSHWDALSDLEE 91
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022154721.1 | 2.8e-12 | 68.49 | protein phosphatase 1 regulatory subunit pprA [Momordica charantia] >XP_02215472... | [more] |
XP_023547162.1 | 2.4e-11 | 67.12 | protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita pep... | [more] |
XP_022946403.1 | 3.1e-11 | 67.12 | protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita mos... | [more] |
KAG6599471.1 | 3.1e-11 | 67.12 | Protein phosphatase 1 regulatory inhibitor subunit PPP1R7-like protein, partial ... | [more] |
XP_022999515.1 | 3.1e-11 | 67.12 | protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita max... | [more] |
Match Name | E-value | Identity | Description | |
Q84WJ9 | 6.8e-09 | 60.66 | Protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog OS=Arabidopsis... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DN03 | 1.4e-12 | 68.49 | protein phosphatase 1 regulatory subunit pprA OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1KFL4 | 1.5e-11 | 67.12 | protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog OS=Cucurbita m... | [more] |
A0A6J1G3P9 | 1.5e-11 | 67.12 | protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog OS=Cucurbita m... | [more] |
A0A5D3CKJ2 | 2.2e-10 | 63.01 | Protein phosphatase 1 regulatory subunit pprA OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7V2Q2 | 2.2e-10 | 63.01 | Protein phosphatase 1 regulatory subunit pprA OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
AT5G19680.1 | 4.8e-10 | 60.66 | Leucine-rich repeat (LRR) family protein | [more] |