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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGTGGAACTAAAATTCAAGAATATCTACCATTTTCTATGGCTAGAAAGGGGAATGCGAAATCGAATATCTTTAAAAGCTTTCTTTCGATTTGTAAACGAATCAGGATTTGACTGAGGAAATACTGTTGGCTTTTCTATGATGAATTTATGTGTTGAGTTGCTGACTAAATTTTGAAGTGGATTATATTACAGTTTAAAGTCTTTTTGTTCTAATTCCAGCAGTGATCAGATGGGAACTCGAGCATATTCAAAGTTCATCCATATGAGAATATTATGTACCTAGTTGATGACAGAAAGATTTCCGAGTATGTTGGGCAACAAAAGATAAGTGTTAAAGTCTTTGAAAGCTTTTCTCCCATCTTTGCTGAAAATGAAATCTACTTTTACTTTTTTTGAATACTTTTTAGTTGTGGCGGTGGAAAATGGGGGCTCAAAGAGGGATGAAATTTGATAAAAGTGGGCACATACCAATATGTTCAGTACTCTTTTCAGGTGATTCTCTATTTTGTCCTTTTTTTTAATTTTTTCCAATTTTATTCTCGATATATTATAAGTTTTTAATGAGGTCTCTTCGGAAAAAACTTCGTTCACACAAAGTCAATGTATTGTTAATATATTTGAAATATATGAATATGTTATGACACTCAACTTGTGTGTAATATAACTTTCTTATCAAATTTCAAAAGAATATGAAAGCAATTACTGAATCAAAGTAAAATTGAGAAGTTCAAAGATTCAACTTCTATTTTGGTTCTTTTATTTTGAAACTTATTTTATATTTGTTTTACTTTTGTTCATGCACTTTCAATAAATTATCAAATCATTGCTTGTTCGGATAAAATTTAGTCTAAAAATATATTCTCATAATGTAATTTTAATTTAGACTAAAAGGGGACAACTCCAACAAAACTTTTAACATAGGTGTCTATCAAATGTTCACATCTTGATTTTACGAGGCATTGATGAAAACATCGGTGAAGGTAAAGGTGAAACAATCGATATATTATATTTTTCAAAGTATTGGTAAAAGAGTTAAAAGTACTTTCTTCCATTTTAGTCTTTTATGTTTCTATTGATTTTAAAATTTTTGTGCCTTGCTTTATGGTTAATCTCTTTCTACAAAAGTATCTGTTTTTACAATTTTTCTTTAAAATTTTAGAAATCCATTCACATTGAAATTTGTTTCTATTATTTTGTAAAATTAAATAAATATTAACTTCAATCTAAGAAAATGCAGGTGTGCGTGGACATGAGCATGCAGGAGCACTGGTACAGTTTCAAGAAAATCACAACTTGACCCGATTGAACAGAGCCTATGTAAGATTCTCTCTTCTTTTCATTTCTCGCTAAAAGGAACTGAACATATTCGATGCTCATCAGAAAAGTAGATGCTTCTGTCGTATTGCTGATGACTTTTACCCTTATAATGCGCGTTTGGGGTTGGCTGATACCTCGTCATTGGGGTTGGTTGGGTGTTTTTTCTATATGGGCGGAGTGTGGGGCCCTTTCATTTCGGAAATACGATGAACTCGTATATGATGCAAGCAATGAAGCGCAAGAGAATGTGAAAAGGAGGGGAGAAGTGGTGTGTGGTGCGCGGGTGAGGAGGGTGTGTGGGTCGACTATGAGAAAATATCTGACGGATAGGCTGGGCGTAATATGAGGGTGAGTGTCATGGGGATAACTGGTGGGTTACTTCCTAGGTTTGTAGTAATAGTTTTCCCAAGGCTTGTACGCTGTAAGCTGTTGAGGGTTGGTCAATTTGACTCTTCATACGTTTCTATGGTTTTGAACTTTGAAGGTTCTTGGAAAGATTTTGCCAGTTTATATCATTTCATTTGCGTTAAGTAAGAGAATTCCTATTCTAGAGAACTAA mRNA sequence ATGTTGTGGCGGTGGAAAATGGGGGCTCAAAGAGGGATGAAATTTGATAAAAGTGGGCACATACCAATATGTTCAGTACTCTTTTCAGGTGTGCGTGGACATGAGCATGCAGGAGCACTGGTACAGTTTCAAGAAAATCACAACTTGACCCGATTGAACAGAGCCTATGTTCTTGGAAAGATTTTGCCAGTTTATATCATTTCATTTGCGTTAAGTAAGAGAATTCCTATTCTAGAGAACTAA Coding sequence (CDS) ATGTTGTGGCGGTGGAAAATGGGGGCTCAAAGAGGGATGAAATTTGATAAAAGTGGGCACATACCAATATGTTCAGTACTCTTTTCAGGTGTGCGTGGACATGAGCATGCAGGAGCACTGGTACAGTTTCAAGAAAATCACAACTTGACCCGATTGAACAGAGCCTATGTTCTTGGAAAGATTTTGCCAGTTTATATCATTTCATTTGCGTTAAGTAAGAGAATTCCTATTCTAGAGAACTAA Protein sequence MLWRWKMGAQRGMKFDKSGHIPICSVLFSGVRGHEHAGALVQFQENHNLTRLNRAYVLGKILPVYIISFALSKRIPILEN
Homology
BLAST of Carg17355 vs. NCBI nr
Match: KAG7028967.1 (hypothetical protein SDJN02_10150, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 1 MLWRWKMGAQRGMKFDKSGHIPICSVLFSGVRGHEHAGALVQFQENHNLTRLNRAYVLGK 60 MLWRWKMGAQRGMKFDKSGHIPICSVLFSGVRGHEHAGALVQFQENHNLTRLNRAYVLGK Sbjct: 1 MLWRWKMGAQRGMKFDKSGHIPICSVLFSGVRGHEHAGALVQFQENHNLTRLNRAYVLGK 60
Query: 61 ILPVYIISFALSKRIPILEN 81 ILPVYIISFALSKRIPILEN Sbjct: 61 ILPVYIISFALSKRIPILEN 80
BLAST of Carg17355 vs. NCBI nr
Match: KAG6597510.1 (hypothetical protein SDJN03_10690, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.2 bits (300), Expect = 8.3e-24 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0 Query: 2 LWRWKMGAQRGMKFDKSGHIPICSVLFSGVRGHEHAGALVQFQENHNLTRLNRAY 57 LWRWKMGAQRGM+FDKSGHIPICSVLFSG RGHEHAGALVQFQENHNLTRLNRAY Sbjct: 10 LWRWKMGAQRGMEFDKSGHIPICSVLFSGARGHEHAGALVQFQENHNLTRLNRAY 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7028967.1 | 1.6e-38 | 100.00 | hypothetical protein SDJN02_10150, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6597510.1 | 8.3e-24 | 96.36 | hypothetical protein SDJN03_10690, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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