Carg15891 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15891
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S3a
Location	Carg_Chr08: 6939274 .. 6942129 (+)
RNA-Seq Expression	Carg15891
Synteny	Carg15891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTAAAGAGATGAAATTAGGGTTTTTGGCGCAGCCGTATCTCTCTCGATAGTTTTTCTTCCTCTGGAGCTGCTCTGAGCTTCCCAACTGGTCTAACCATGGCTGTCGGGTAACTCTTCGTCTCCATTTCTTTTGTCACCTCCTTTCCGTTTGTACTCTTTTCACTGATGCTACTGTTTTTCTTCTTATATTTGCAGAAAGAACAAGAGGATTTCGAAAGGAAAGAAGGGAGGCAAGAAGAAGACGTAAGTATTCTGTCTCTTTCCTTTGAATTTTCTCATATCAGATCTAGGTGTCTAATGTTGTCAAGTTTTAGTTTTTCAATTAGTCTGTAATGGTTATTAGTGCTCAATCGTTGTATATATTAATTTGGTTTCGTTCCTCCGGGGATCCTTTAGTGTCGACCCATTTGCCAAGAAGGATTGGTACGATATCAAGGCACCTTCTGTGTTCAATGTCAAGAACGTCGGGAAGACTCTCGTTACTCGCACTCAGGGTACCAAGGTAGATTCGGCACTTTAATCGCTCTCCTTCATTCATACTTTATTAAGTTTTCTCCATCTACGTTTGCCCTAGTTTGCTTTCGTTGCGTGGAAGCATTTTTCTTATTATGGAGAGGTTACTGTAATTTCTGGTATAGAAAGTAGCCCGACACTACAGGCACTTAAAAGGAGTAGGCCCCGTAATGTAGAGTATACTGAAGAAAATATAAATTTACATACTTGAAGTGTTTGCCTAATATTCTAACCAAACAGTTTTTTCTTGCTCGACTGCGTTGATTGCGAAAATGGAATTATTTTATTCAGCTGTTATTTGGTATGGAATCTTCAGTAATATTGAAACTACATTTACTGTGTTAACTCTCAAAGCTCTTTAGGTATATAATTGTGGTTTTTGTGCAAGACCAGTAATTTCTGGTGATGTAGTGGTAGTTGAAGTCACTCGTTTGTAGATTAGGAGATGCATTTATTGTTCTAAAGTATAAATTTTAGTGAAACATGTTTGTACTTGTAGATTTCTGTAGCAATTATTTGTTTTTCAGCTTTGTGCATTTTCTTCTTGTTTGTATCTTTTTAAATACTTATAATTCTTGTTCCAACAGATTGCCTCTGAGGGACTTAAACACCGTGTGTTTGAGGTATCCTTGGCTGACCTTCAGGATGACGAGGAGCACGCCTACCGAAAGATTAGATTGAGAGCCGAAGATGTTCAAGGAAGGAATGTTCTGACTAATTTCTGGGTACGATTGGTTCTTTTATATTTTTGGAATGGATATGAAAATGTTTAAATGGTACTAATTTTTTAGTTTTCTGCAGTAGTGGTATTTTTTTTCCATTTCAAGCAGTCCTTGTGAATTTTTAGAACTCATAAAACTCCATTGTTAAACAGGGAATGAATTTTACTACTGATAAATTGAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCTCATGTGGATGTTAAGACCACAGACAGCTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCCAAACCAGGTTAAAAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGGTGACTACTGAATACATGTTATCTAATGTCTTAAGAAAGTTTTACTGATGTCTGAAATATCTATGATTAGTTTACTGTGGAAAATGATGAGTTCAGAAATTATGGATGAAAAAATGCGCGGTGTGGATAACTATTTTTCTTAAACAAGGGCGGCATGTATGGAAGCTTTACTTGTTCTATGTGCGTTATATGTGGCTGAGACTTGTTCATTGTCATTGATAATATTCTTTCCAGATTCTCGAAGACTGTTTTCTTTAATAGCTTAGATACAATAAAATCATCTACTAAGAATGGATTTTGTTAATCTTTACTGTGATGATGGTCTATTATTATGTTTTGTTCTACCTGACGTTTGGTACTTGGATCTATTGGTTTTCTTATTCCCATTACAACAAGATCTTGATTTTCTATTATTTTACACTACTCTCTTGTATCAAACATTTAGTTATACAGTATAAACTAAGAGTTGTTCCACATCACTTGAGTTGAACTATTCTCTATGCAGCTTTTGCTATGTTTCTGTTTTCTCACTTGGAATGAAAATATGCTTGTGCATTGAGCCTGGTTTTTAAGGATATGGGAATGAGATCTTCATGATTAACCAGGCAGATCTGTTACTATTTGTAAACTATAGTTTTTTATTGCAGATTCGCCGAAAGATGAGGGAGATCATGGTAAACCAGGCAACGTCTTGTGATCTGAAAGAGTTGGTTCGTAAGTTTATTCCTGAATCAATTGGAAAAGAAATCGAGAAGGCAACATCTAGCATATACCCTCTACAAAATGTTTTCATTCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTATATTGCTATTTACCTGCTCATTAAACCTGCTGGTTTCCCTCAATCTTACCTTCCATTTTCACTCCTTAATTGAAAGATTCATGATCAAGTGTCACTTGAGGTCGTGAAACTTGTTGCAATAGTTTTTATCATTATGACCAATCCTTTCTTTTACTATGTCTAGGTTCATGGCGATTATTCAGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCCGATGAAGTTGTCGAGGAGGCCACCGAAGTTGTTGGGGCTTGAAAATGGATTCTTGAATCAACTTTCTCATATTTACGAATGAACTGTGGCTTTTTGTTTTAGTTATAGTTGTATTACGCTTTCTGCTAAGTTGAGAAATCAGAGATAATCAGCGATTTTGACTATGAAAAATACTTGCTGCTTTTAAGTTGAGTATTATTCCTTGGAACTATTTG

mRNA sequence

TATTTAAAGAGATGAAATTAGGGTTTTTGGCGCAGCCGTATCTCTCTCGATAGTTTTTCTTCCTCTGGAGCTGCTCTGAGCTTCCCAACTGGTCTAACCATGGCTGTCGGAAAGAACAAGAGGATTTCGAAAGGAAAGAAGGGAGGCAAGAAGAAGACTGTCGACCCATTTGCCAAGAAGGATTGGTACGATATCAAGGCACCTTCTGTGTTCAATGTCAAGAACGTCGGGAAGACTCTCGTTACTCGCACTCAGGGTACCAAGATTGCCTCTGAGGGACTTAAACACCGTGTGTTTGAGGTATCCTTGGCTGACCTTCAGGATGACGAGGAGCACGCCTACCGAAAGATTAGATTGAGAGCCGAAGATGTTCAAGGAAGGAATGTTCTGACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTGAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCTCATGTGGATGTTAAGACCACAGACAGCTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCCAAACCAGGTTAAAAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATTCGCCGAAAGATGAGGGAGATCATGGTAAACCAGGCAACGTCTTGTGATCTGAAAGAGTTGGTTCGTAAGTTTATTCCTGAATCAATTGGAAAAGAAATCGAGAAGGCAACATCTAGCATATACCCTCTACAAAATGTTTTCATTCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGCGATTATTCAGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCCGATGAAGTTGTCGAGGAGGCCACCGAAGTTGTTGGGGCTTGAAAATGGATTCTTGAATCAACTTTCTCATATTTACGAATGAACTGTGGCTTTTTGTTTTAGTTATAGTTGTATTACGCTTTCTGCTAAGTTGAGAAATCAGAGATAATCAGCGATTTTGACTATGAAAAATACTTGCTGCTTTTAAGTTGAGTATTATTCCTTGGAACTATTTG

Coding sequence (CDS)

ATGGCTGTCGGAAAGAACAAGAGGATTTCGAAAGGAAAGAAGGGAGGCAAGAAGAAGACTGTCGACCCATTTGCCAAGAAGGATTGGTACGATATCAAGGCACCTTCTGTGTTCAATGTCAAGAACGTCGGGAAGACTCTCGTTACTCGCACTCAGGGTACCAAGATTGCCTCTGAGGGACTTAAACACCGTGTGTTTGAGGTATCCTTGGCTGACCTTCAGGATGACGAGGAGCACGCCTACCGAAAGATTAGATTGAGAGCCGAAGATGTTCAAGGAAGGAATGTTCTGACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTGAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCTCATGTGGATGTTAAGACCACAGACAGCTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCCAAACCAGGTTAAAAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATTCGCCGAAAGATGAGGGAGATCATGGTAAACCAGGCAACGTCTTGTGATCTGAAAGAGTTGGTTCGTAAGTTTATTCCTGAATCAATTGGAAAAGAAATCGAGAAGGCAACATCTAGCATATACCCTCTACAAAATGTTTTCATTCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGCGATTATTCAGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCCGATGAAGTTGTCGAGGAGGCCACCGAAGTTGTTGGGGCTTGA

Protein sequence

MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

Homology

[Close]

BLAST of Carg15891 vs. NCBI nr
Match: XP_023000239.1 (40S ribosomal protein S3a-like [Cucurbita maxima] >XP_023514634.1 40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo] >KAG6593879.1 hypothetical protein SDJN03_13355, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026224.1 hypothetical protein SDJN02_12723 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 511.9 bits (1317), Expect = 3.2e-141
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPADEVVEEATEVVGA
Sbjct: 241 VKVDRPADEVVEEATEVVGA 260

[Close]

BLAST of Carg15891 vs. NCBI nr
Match: XP_022930511.1 (40S ribosomal protein S3a-like [Cucurbita moschata])

HSP 1 Score: 509.2 bits (1310), Expect = 2.1e-140
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKGIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPADEVVEEATEVVGA
Sbjct: 241 VKVDRPADEVVEEATEVVGA 260

[Close]

BLAST of Carg15891 vs. NCBI nr
Match: XP_023006746.1 (40S ribosomal protein S3a-like [Cucurbita maxima] >XP_023548740.1 40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo] >KAG6574967.1 hypothetical protein SDJN03_25606, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013536.1 hypothetical protein SDJN02_23702 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.7 bits (1306), Expect = 6.0e-140
Identity = 258/260 (99.23%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPA+EVVE ATEVVGA
Sbjct: 241 VKVDRPAEEVVEGATEVVGA 260

[Close]

BLAST of Carg15891 vs. NCBI nr
Match: XP_022959011.1 (40S ribosomal protein S3a-like [Cucurbita moschata])

HSP 1 Score: 505.4 bits (1300), Expect = 3.0e-139
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPELIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPA+EVVE ATEVVGA
Sbjct: 241 VKVDRPAEEVVEGATEVVGA 260

[Close]

BLAST of Carg15891 vs. NCBI nr
Match: XP_022138569.1 (40S ribosomal protein S3a [Momordica charantia])

HSP 1 Score: 504.2 bits (1297), Expect = 6.7e-139
Identity = 256/260 (98.46%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPADEVVE ATEVVGA
Sbjct: 241 VKVDRPADEVVEGATEVVGA 260

[Close]

BLAST of Carg15891 vs. ExPASy Swiss-Prot
Match: Q8GTE3 (40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 5.0e-129
Identity = 235/261 (90.04%), Postives = 248/261 (95.02%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEAT-EVVGA 261
            KV+ PADE V E T E+VGA
Sbjct: 241 TKVESPADETVVEGTPEIVGA 261

[Close]

BLAST of Carg15891 vs. ExPASy Swiss-Prot
Match: P33444 (40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4)

HSP 1 Score: 459.5 bits (1181), Expect = 2.5e-128
Identity = 229/261 (87.74%), Postives = 249/261 (95.40%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           L+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+FTTDKLRSLVRKW +L
Sbjct: 61  LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DV 240
           LK+LV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDI 240

Query: 241 GVKVDRPADEVVEEATEVVGA 261
           G K+DRPA+E V E TEV+GA
Sbjct: 241 GTKLDRPAEEAVAEPTEVIGA 261

[Close]

BLAST of Carg15891 vs. ExPASy Swiss-Prot
Match: P49198 (40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2)

HSP 1 Score: 458.4 bits (1178), Expect = 5.5e-128
Identity = 227/260 (87.31%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNFWGM+ TTDKLRSLV+KW +L
Sbjct: 61  LKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD++TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CD
Sbjct: 121 IEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VK+DRPA+E   EATEV+GA
Sbjct: 241 VKLDRPAEEAAPEATEVIGA 260

[Close]

BLAST of Carg15891 vs. ExPASy Swiss-Prot
Match: A5B4K1 (40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 3.6e-127
Identity = 230/261 (88.12%), Postives = 245/261 (93.87%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG+EIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADE-VVEEATEVVGA 261
            K++RPADE V E  TEV+GA
Sbjct: 241 TKLERPADEPVAEGVTEVIGA 261

[Close]

BLAST of Carg15891 vs. ExPASy Swiss-Prot
Match: Q285L8 (40S ribosomal protein S3a OS=Nicotiana tabacum OX=4097 GN=cyc07 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-126
Identity = 229/261 (87.74%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DP+AKKDWYDIKAPSVF++KNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV KFIPESIG+EIEKATSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEA-TEVVGA 261
           VK+DRPADE V EA  E+ GA
Sbjct: 241 VKLDRPADETVAEAEPEIPGA 261

[Close]

BLAST of Carg15891 vs. ExPASy TrEMBL
Match: A0A6J1KJB0 (40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111494520 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.5e-141
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPADEVVEEATEVVGA
Sbjct: 241 VKVDRPADEVVEEATEVVGA 260

[Close]

BLAST of Carg15891 vs. ExPASy TrEMBL
Match: A0A6J1ER42 (40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111436943 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.0e-140
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKGIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPADEVVEEATEVVGA
Sbjct: 241 VKVDRPADEVVEEATEVVGA 260

[Close]

BLAST of Carg15891 vs. ExPASy TrEMBL
Match: A0A6J1KYM2 (40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111499385 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 2.9e-140
Identity = 258/260 (99.23%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPA+EVVE ATEVVGA
Sbjct: 241 VKVDRPAEEVVEGATEVVGA 260

[Close]

BLAST of Carg15891 vs. ExPASy TrEMBL
Match: A0A6J1H3P8 (40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111460131 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPELIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPA+EVVE ATEVVGA
Sbjct: 241 VKVDRPAEEVVEGATEVVGA 260

[Close]

BLAST of Carg15891 vs. ExPASy TrEMBL
Match: A0A6J1CAG4 (40S ribosomal protein S3a OS=Momordica charantia OX=3673 GN=LOC111009696 PE=3 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.2e-139
Identity = 256/260 (98.46%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPADEVVEEATEVVGA 261
           VKVDRPADEVVE ATEVVGA
Sbjct: 241 VKVDRPADEVVEGATEVVGA 260

[Close]

BLAST of Carg15891 vs. TAIR 10
Match: AT3G04840.1 (Ribosomal protein S3Ae )

HSP 1 Score: 446.0 bits (1146), Expect = 2.0e-125
Identity = 225/262 (85.88%), Postives = 246/262 (93.89%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAPS+F  +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDSYTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 240
           LK+LV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240

Query: 241 GVKVDRPADEV-VEEATEVVGA 261
           GVKVDRPADE+ VEE TE++GA
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA 262

[Close]

BLAST of Carg15891 vs. TAIR 10
Match: AT4G34670.1 (Ribosomal protein S3Ae )

HSP 1 Score: 445.3 bits (1144), Expect = 3.4e-125
Identity = 226/262 (86.26%), Postives = 244/262 (93.13%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAP  F  +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCD
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 240
           LKELV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240

Query: 241 GVKVDRPADE-VVEEATEVVGA 261
           GVKVDRPADE +VEE TE++GA
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA 262

The following BLAST results are available for this feature:

BLAST of Carg15891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000239.1	3.2e-141	100.00	40S ribosomal protein S3a-like [Cucurbita maxima] >XP_023514634.1 40S ribosomal ...	[more]
XP_022930511.1	2.1e-140	99.62	40S ribosomal protein S3a-like [Cucurbita moschata]	[more]
XP_023006746.1	6.0e-140	99.23	40S ribosomal protein S3a-like [Cucurbita maxima] >XP_023548740.1 40S ribosomal ...	[more]
XP_022959011.1	3.0e-139	98.85	40S ribosomal protein S3a-like [Cucurbita moschata]	[more]
XP_022138569.1	6.7e-139	98.46	40S ribosomal protein S3a [Momordica charantia]	[more]

BLAST of Carg15891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GTE3	5.0e-129	90.04	40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
P33444	2.5e-128	87.74	40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4	[more]
P49198	5.5e-128	87.31	40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2	[more]
A5B4K1	3.6e-127	88.12	40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3...	[more]
Q285L8	1.8e-126	87.74	40S ribosomal protein S3a OS=Nicotiana tabacum OX=4097 GN=cyc07 PE=2 SV=1	[more]

BLAST of Carg15891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJB0	1.5e-141	100.00	40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111494520 PE=3 SV=1	[more]
A0A6J1ER42	1.0e-140	99.62	40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111436943 PE=3 SV=...	[more]
A0A6J1KYM2	2.9e-140	99.23	40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111499385 PE=3 SV=1	[more]
A0A6J1H3P8	1.4e-139	98.85	40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111460131 PE=3 SV=...	[more]
A0A6J1CAG4	3.2e-139	98.46	40S ribosomal protein S3a OS=Momordica charantia OX=3673 GN=LOC111009696 PE=3 SV...	[more]

BLAST of Carg15891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04840.1	2.0e-125	85.88	Ribosomal protein S3Ae	[more]
AT4G34670.1	3.4e-125	86.26	Ribosomal protein S3Ae	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001593	Ribosomal protein S3Ae	SMART	SM01397	Ribosomal_S3Ae_2	coord: 15..221 e-value: 7.7E-142 score: 487.2
IPR001593	Ribosomal protein S3Ae	PFAM	PF01015	Ribosomal_S3Ae	coord: 16..221 e-value: 6.5E-84 score: 280.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR11830:SF33	40S RIBOSOMAL PROTEIN S3A	coord: 1..259
None	No IPR available	PANTHER	PTHR11830	40S RIBOSOMAL PROTEIN S3A	coord: 1..259
IPR018281	Ribosomal protein S3Ae, conserved site	PROSITE	PS01191	RIBOSOMAL_S3AE	coord: 61..73
IPR027500	40S ribosomal protein S1/3, eukaryotes	HAMAP	MF_03122	Ribosomal_S3Ae_euk	coord: 1..260 score: 40.895168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15891-RA	Carg15891-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome