Carg15324 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15324
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rac-like GTP-binding protein RAC13
Location	Carg_Chr03: 9293651 .. 9294751 (-)
RNA-Seq Expression	Carg15324
Synteny	Carg15324

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCAAACCATGAACACCGCCAGGTTTCTCAAATGCGTCACCGTCGGGGACGGCGCCGTCGGGAAGACTTGTATGCTCATTTCTTACACCACCAACACTTTTCCCACGGTACCCATCTCCCATTTCCCTATTTCAAATAATGGGTTTCGCTTCTTTTCCTTTCTTCATTCGTTTTTGTTCGTAGGATTATGTTCCGACCGTGTTCGATAACTTCAGCGCCAATGTGGTAGTCGACGGCAGCACCGTCAATCTTGGCTTATGGGACACTGCCGGACAGGAAGATTACAACAGACTGAGGCCTCTGAGTTACAGAGGAGCTGATGTTTTCCTATTGTCGTTTTCTCTCATCAGCAAACCCAGTTACGAGAACATCTTCAAGAAGGTAATTTAAATTCTTCCAAATTTCCCATTATGTCATAAAGCTAAGCCCTCTTCCTTTATGTTGCAGTGGATTCCTGAACTTAAACATTACGCTCCAAACGTCCCCATCGTTCTGGTTGGGACTAAGCTTGGTAAGAACTCCTTAACTTCACACCATTAAGCCGCAAATCGAGTGAATTATGGTAACATTCAACGAAATCAACAACTTGCAGATCTACGAGACGACAGGCAGTATCTGATTGATCATCCAACCGCAACACCCATAACCACAGCTGAGGTAAAGAAATTAATCACTTGAAAAAACTGGATTCTGTTCTTGGGTCTGTTGATTCGACTGAAGGTTGTTCTTCAGGGCGAGGAACTGAGGCGGATGATCGGGGGCATTGCATACATAGAATGCAGCTCCAAAACCCAAAAGGTATAGAAATTGATCCATAAAGGCCAAACGTTAACTGAATTGAATCTTTCCCCTTATAAACTCATATTCATTTTTCAAATTAATCAATGTGGGACTCTGTCCTAGCCATCCTCACCATTGAATTCTTTTTTGGGCGCAGAACGTTAAGAATGTATTTGATGCAGCAATAAAGGTAGCATTGAGGCCTCCACGACCAAAGAAGAAGCCTTGCAAGCAGAGGACGACTTGTGCTTTGCTTTGAAAAATAAGTTCAAATAATTGGAAAAAAAAATATATATTTCCCATCCATTTAAATTATATA

mRNA sequence

ATTCCAAACCATGAACACCGCCAGGTTTCTCAAATGCGTCACCGTCGGGGACGGCGCCGTCGGGAAGACTTGTATGCTCATTTCTTACACCACCAACACTTTTCCCACGGATTATGTTCCGACCGTGTTCGATAACTTCAGCGCCAATGTGGTAGTCGACGGCAGCACCGTCAATCTTGGCTTATGGGACACTGCCGGACAGGAAGATTACAACAGACTGAGGCCTCTGAGTTACAGAGGAGCTGATGTTTTCCTATTGTCGTTTTCTCTCATCAGCAAACCCAGTTACGAGAACATCTTCAAGAAGTGGATTCCTGAACTTAAACATTACGCTCCAAACGTCCCCATCGTTCTGGTTGGGACTAAGCTTGATCTACGAGACGACAGGCAGTATCTGATTGATCATCCAACCGCAACACCCATAACCACAGCTGAGGGCGAGGAACTGAGGCGGATGATCGGGGGCATTGCATACATAGAATGCAGCTCCAAAACCCAAAAGAACGTTAAGAATGTATTTGATGCAGCAATAAAGGTAGCATTGAGGCCTCCACGACCAAAGAAGAAGCCTTGCAAGCAGAGGACGACTTGTGCTTTGCTTTGAAAAATAAGTTCAAATAATTGGAAAAAAAAATATATATTTCCCATCCATTTAAATTATATA

Coding sequence (CDS)

ATGAACACCGCCAGGTTTCTCAAATGCGTCACCGTCGGGGACGGCGCCGTCGGGAAGACTTGTATGCTCATTTCTTACACCACCAACACTTTTCCCACGGATTATGTTCCGACCGTGTTCGATAACTTCAGCGCCAATGTGGTAGTCGACGGCAGCACCGTCAATCTTGGCTTATGGGACACTGCCGGACAGGAAGATTACAACAGACTGAGGCCTCTGAGTTACAGAGGAGCTGATGTTTTCCTATTGTCGTTTTCTCTCATCAGCAAACCCAGTTACGAGAACATCTTCAAGAAGTGGATTCCTGAACTTAAACATTACGCTCCAAACGTCCCCATCGTTCTGGTTGGGACTAAGCTTGATCTACGAGACGACAGGCAGTATCTGATTGATCATCCAACCGCAACACCCATAACCACAGCTGAGGGCGAGGAACTGAGGCGGATGATCGGGGGCATTGCATACATAGAATGCAGCTCCAAAACCCAAAAGAACGTTAAGAATGTATTTGATGCAGCAATAAAGGTAGCATTGAGGCCTCCACGACCAAAGAAGAAGCCTTGCAAGCAGAGGACGACTTGTGCTTTGCTTTGA

Protein sequence

MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKLDLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRPPRPKKKPCKQRTTCALL

Homology

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BLAST of Carg15324 vs. NCBI nr
Match: XP_022925841.1 (rac-like GTP-binding protein RAC13 [Cucurbita moschata] >KAG6581340.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034624.1 Rac-like GTP-binding protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 2.4e-109
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKKPCKQRTTCALL
Sbjct: 181 PRPKKKPCKQRTTCALL 197

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BLAST of Carg15324 vs. NCBI nr
Match: XP_023544294.1 (rac-like GTP-binding protein RAC13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 3.3e-106
Identity = 193/197 (97.97%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MNTARF+KCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVV DGSTVNLGLWD
Sbjct: 1   MNTARFIKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVADGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYLIDHPTATPITTAEGEELRRMIGGI YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGITYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKKPCKQR TCALL
Sbjct: 181 PRPKKKPCKQR-TCALL 196

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BLAST of Carg15324 vs. NCBI nr
Match: XP_022926975.1 (rac-like GTP-binding protein RAC13 [Cucurbita moschata] >XP_023003127.1 rac-like GTP-binding protein RAC13 [Cucurbita maxima] >XP_023517161.1 rac-like GTP-binding protein RAC13 [Cucurbita pepo subsp. pepo] >KAG6594570.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026543.1 Rac-like GTP-binding protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.1 bits (967), Expect = 9.3e-101
Identity = 181/197 (91.88%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKWIPELKHYAPNVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIILVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYL+DHP A+PITTA+GEELR+MIG + YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLMDHPGASPITTAQGEELRKMIGAVTYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRTTCALL
Sbjct: 181 PRPKKKARKQRTTCALL 197

[Close]

BLAST of Carg15324 vs. NCBI nr
Match: XP_038881426.1 (rac-like GTP-binding protein RAC13 [Benincasa hispida] >XP_038881427.1 rac-like GTP-binding protein RAC13 [Benincasa hispida])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 182/197 (92.39%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKW+PELKHYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYLIDHP ATPIT A+GEELR+MIG I YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLIDHPGATPITPAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRT CALL
Sbjct: 181 PRPKKKARKQRTNCALL 197

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BLAST of Carg15324 vs. NCBI nr
Match: XP_008439788.1 (PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo] >KAA0052649.1 rac-like GTP-binding protein RAC13 [Cucumis melo var. makuwa] >TYK13177.1 rac-like GTP-binding protein RAC13 [Cucumis melo var. makuwa])

HSP 1 Score: 375.2 bits (962), Expect = 3.5e-100
Identity = 181/197 (91.88%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKW+PELKHYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLR+DR+YLIDHP ATPIT A+GEELR+MIG I YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLREDREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRTTCALL
Sbjct: 181 PRPKKKARKQRTTCALL 197

[Close]

BLAST of Carg15324 vs. ExPASy Swiss-Prot
Match: Q41253 (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum OX=3635 GN=RAC13 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 4.5e-98
Identity = 170/197 (86.29%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENI+KKWIPEL+HYA NVP+VLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIYKKWIPELRHYAHNVPVVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+LIDHP ATPI+T++GEEL++MIG + YIECSSKTQ+NVK VFDAAIKVALRP
Sbjct: 121 DLRDDKQFLIDHPGATPISTSQGEELKKMIGAVTYIECSSKTQQNVKAVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+PK+KPCK+R TCA L
Sbjct: 181 PKPKRKPCKRR-TCAFL 196

[Close]

BLAST of Carg15324 vs. ExPASy Swiss-Prot
Match: Q41254 (Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum OX=3635 GN=RAC9 PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.1e-93
Identity = 163/197 (82.74%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MNT+RF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MNTSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLIS+ SYEN+ KKWIPEL+HYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVHKKWIPELRHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+L D+P A  ITT++GEEL++MIG + YIECSSKTQ+NVK VFD AIK+ALRP
Sbjct: 121 DLRDDKQFLSDNPGAISITTSQGEELKKMIGAVTYIECSSKTQQNVKAVFDVAIKIALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+PK+KP K+R +CA L
Sbjct: 181 PKPKRKPIKRR-SCAFL 196

[Close]

BLAST of Carg15324 vs. ExPASy Swiss-Prot
Match: Q6Z7L8 (Rac-like GTP-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC7 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.7e-93
Identity = 161/197 (81.73%), Postives = 183/197 (92.89%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENI KKWIPEL+HYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLR+D+Q+ +DHP   PI+TA+GEEL+RMIG  AYIECSSKTQ+NVK+VFD+AIKV L P
Sbjct: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+PKKK  +++ +C +L
Sbjct: 181 PKPKKKNTRKQRSCWIL 197

[Close]

BLAST of Carg15324 vs. ExPASy Swiss-Prot
Match: Q40220 (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus OX=34305 GN=RAC2 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 9.7e-93
Identity = 163/191 (85.34%), Postives = 178/191 (93.19%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSL+S+ SYENI KKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLR+DRQYLIDHP ATPITTA+GEEL++ IG   Y+ECSSKTQ+NVK VFDAAIKV L+P
Sbjct: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PRPKKKPCKQR 192
           P+PKKK  K R
Sbjct: 181 PKPKKKRKKTR 191

[Close]

BLAST of Carg15324 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 338.6 bits (867), Expect = 4.8e-92
Identity = 159/197 (80.71%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+ +RF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYEN+ KKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+ +DHP A PI+TA+GEELR++IG  AYIECSSKTQ+N+K VFDAAIKV L+P
Sbjct: 121 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+ KKK  K +  CA+L
Sbjct: 181 PKQKKKKKKAQKGCAIL 197

[Close]

BLAST of Carg15324 vs. ExPASy TrEMBL
Match: A0A6J1ED98 (rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433128 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKKPCKQRTTCALL
Sbjct: 181 PRPKKKPCKQRTTCALL 197

[Close]

BLAST of Carg15324 vs. ExPASy TrEMBL
Match: A0A6J1KLK2 (rac-like GTP-binding protein RAC13 OS=Cucurbita maxima OX=3661 GN=LOC111496833 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.5e-101
Identity = 181/197 (91.88%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKWIPELKHYAPNVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIILVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYL+DHP A+PITTA+GEELR+MIG + YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLMDHPGASPITTAQGEELRKMIGAVTYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRTTCALL
Sbjct: 181 PRPKKKARKQRTTCALL 197

[Close]

BLAST of Carg15324 vs. ExPASy TrEMBL
Match: A0A6J1EMK3 (rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433930 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.5e-101
Identity = 181/197 (91.88%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKWIPELKHYAPNVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIILVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDDRQYL+DHP A+PITTA+GEELR+MIG + YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLRDDRQYLMDHPGASPITTAQGEELRKMIGAVTYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRTTCALL
Sbjct: 181 PRPKKKARKQRTTCALL 197

[Close]

BLAST of Carg15324 vs. ExPASy TrEMBL
Match: A0A5D3CMK5 (Rac-like GTP-binding protein RAC13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007890 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 181/197 (91.88%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKW+PELKHYAPNVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLR+DR+YLIDHP ATPIT A+GEELR+MIG I YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 121 DLREDREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRTTCALL
Sbjct: 181 PRPKKKARKQRTTCALL 197

[Close]

BLAST of Carg15324 vs. ExPASy TrEMBL
Match: A0A6J1CM86 (rac-like GTP-binding protein RAC13 OS=Momordica charantia OX=3673 GN=LOC111012414 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 181/197 (91.88%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 60  MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 119

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENIFKKWIPELKHYAPNVPIVLVGTKL
Sbjct: 120 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIVLVGTKL 179

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLR+DRQYL+DHP ATPITT +GEELR+MIG + YIECSSKTQKNVKNVFDAAIKVALRP
Sbjct: 180 DLREDRQYLMDHPGATPITTPQGEELRKMIGALTYIECSSKTQKNVKNVFDAAIKVALRP 239

Query: 181 PRPKKKPCKQRTTCALL 198
           PRPKKK  KQRTTCALL
Sbjct: 240 PRPKKKTRKQRTTCALL 256

[Close]

BLAST of Carg15324 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 335.5 bits (859), Expect = 2.9e-92
Identity = 157/197 (79.70%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+ +RF+KCVTVGDGAVGKTC+LISYT+NTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+L+FSLISK SYEN+ KKWIPELKHYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+ IDHP A PITTA+GEEL+++IG  AYIECSSKTQ+NVK VFDAAI+V L+P
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+ KKK  K +  C++L
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg15324 vs. TAIR 10
Match: AT2G17800.2 (Arabidopsis RAC-like 1 )

HSP 1 Score: 335.5 bits (859), Expect = 2.9e-92
Identity = 157/197 (79.70%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+ +RF+KCVTVGDGAVGKTC+LISYT+NTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+L+FSLISK SYEN+ KKWIPELKHYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+ IDHP A PITTA+GEEL+++IG  AYIECSSKTQ+NVK VFDAAI+V L+P
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+ KKK  K +  C++L
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg15324 vs. TAIR 10
Match: AT5G45970.1 (RAC-like 2 )

HSP 1 Score: 335.1 bits (858), Expect = 3.8e-92
Identity = 159/186 (85.48%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+TARF+KCVTVGDGAVGKTCMLISYT+NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFLL+FSLISK SYENI KKW+PELKHYAP +PIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+L DHP A  ITTA+GEELR+MIG + Y+ECSSKTQ+NVK VFD AI+VALRP
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRP 180

Query: 181 PRPKKK 187
           P+ KKK
Sbjct: 181 PKAKKK 186

[Close]

BLAST of Carg15324 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 334.3 bits (856), Expect = 6.4e-92
Identity = 158/197 (80.20%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+ +RF+KCVTVGDGAVGKTC+LISYT+NTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+L+FSLISK SYEN+ KKWIPELKHYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+ IDHP A PITTA+GEELR+ IG   YIECSSKTQ+NVK VFDAAI+V L+P
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+ KKK  K +  C++L
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg15324 vs. TAIR 10
Match: AT4G35950.1 (RAC-like 6 )

HSP 1 Score: 331.6 bits (849), Expect = 4.2e-91
Identity = 155/197 (78.68%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MNTARFLKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
           M+ +RF+KCVTVGDGAVGKTC+LISYT+NTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+L+FSLISK SYEN+ KKWIPELKHYAP VPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDRQYLIDHPTATPITTAEGEELRRMIGGIAYIECSSKTQKNVKNVFDAAIKVALRP 180
           DLRDD+Q+ IDHP A PITT +GEEL+++IG  AYIECSSK+Q+NVK VFDAAI+V L+P
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

Query: 181 PRPKKKPCKQRTTCALL 198
           P+ KKK  K +  C++L
Sbjct: 181 PKQKKKKNKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of Carg15324 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925841.1	2.4e-109	100.00	rac-like GTP-binding protein RAC13 [Cucurbita moschata] >KAG6581340.1 Rac-like G...	[more]
XP_023544294.1	3.3e-106	97.97	rac-like GTP-binding protein RAC13 [Cucurbita pepo subsp. pepo]	[more]
XP_022926975.1	9.3e-101	91.88	rac-like GTP-binding protein RAC13 [Cucurbita moschata] >XP_023003127.1 rac-like...	[more]
XP_038881426.1	2.7e-100	92.39	rac-like GTP-binding protein RAC13 [Benincasa hispida] >XP_038881427.1 rac-like ...	[more]
XP_008439788.1	3.5e-100	91.88	PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo] >KAA0052649.1 rac-l...	[more]

BLAST of Carg15324 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41253	4.5e-98	86.29	Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum OX=3635 GN=RAC13 PE=2 S...	[more]
Q41254	1.1e-93	82.74	Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum OX=3635 GN=RAC9 PE=2 SV=...	[more]
Q6Z7L8	5.7e-93	81.73	Rac-like GTP-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC7 ...	[more]
Q40220	9.7e-93	85.34	Rac-like GTP-binding protein RAC2 OS=Lotus japonicus OX=34305 GN=RAC2 PE=2 SV=1	[more]
Q6EP31	4.8e-92	80.71	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]

BLAST of Carg15324 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED98	1.2e-109	100.00	rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433128...	[more]
A0A6J1KLK2	4.5e-101	91.88	rac-like GTP-binding protein RAC13 OS=Cucurbita maxima OX=3661 GN=LOC111496833 P...	[more]
A0A6J1EMK3	4.5e-101	91.88	rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433930...	[more]
A0A5D3CMK5	1.7e-100	91.88	Rac-like GTP-binding protein RAC13 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CM86	1.7e-100	91.88	rac-like GTP-binding protein RAC13 OS=Momordica charantia OX=3673 GN=LOC11101241...	[more]

BLAST of Carg15324 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17800.1	2.9e-92	79.70	Arabidopsis RAC-like 1	[more]
AT2G17800.2	2.9e-92	79.70	Arabidopsis RAC-like 1	[more]
AT5G45970.1	3.8e-92	85.48	RAC-like 2	[more]
AT3G51300.1	6.4e-92	80.20	RHO-related protein from plants 1	[more]
AT4G35950.1	4.2e-91	78.68	RAC-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.14 coord: 155..177 score: 33.92 coord: 47..69 score: 49.26 coord: 109..122 score: 55.07 coord: 7..28 score: 44.62
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..180 e-value: 2.3E-27 score: 106.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..180 e-value: 4.4E-27 score: 106.0
None	No IPR available	PANTHER	PTHR24072:SF300	RAC-LIKE GTP-BINDING PROTEIN ARAC2	coord: 1..197
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..197 score: 19.934528
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..177 score: 25.273544
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..178 e-value: 1.28603E-128 score: 357.234
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..180 e-value: 9.7E-111 score: 383.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..177 e-value: 1.7E-52 score: 177.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..197 score: 17.560423
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..196 e-value: 1.6E-70 score: 238.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..177
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 8..171 e-value: 5.8E-34 score: 115.2
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15324-RA	Carg15324-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0090379	secondary cell wall biogenesis involved in seed trichome differentiation
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0030865	cortical cytoskeleton organization
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0042995	cell projection
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005938	cell cortex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity