Carg14853 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg14853
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich protein A3-like
LocationCarg_Chr14: 13879010 .. 13880655 (-)
RNA-Seq ExpressionCarg14853
SyntenyCarg14853
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTCATTTATCTTGATTGTGATCATATTCTCCTGAATTTCACTCTGATGATTTTCTTCTTCTTTCTGTTCGTTTTTCGCTCTCTCCGGAACTTTTTGGACTGCGTTCTGGAAATCGATTGAATGTGTGGTTAAAGATCATTTCATGTTCGAGTTTGTCGGTGTTCTTCAGGTCCTCTTGCTTTTTATCGCTTGTCCTCACGATAGATAACAACATTAGAAAAGAGTTGTTGATCCATTCTGTTGCGAATGATTTTGCTAGATAATCGGTTGAAGCAACGGGTTGAGTTATCAATTCCTTTGTTTGATTGTTCTTGGTGTAGATATGTGATTTTAGCTACGAGTTAATCTTATTCGATCCAATGTAATTTTAGTCAGTCTTGAATTTTGTTTGGTATCAACAGAATCAAATGGAGTCTTCGCATATCAATTCCTTTGTTTGATTGTTCTTGAATTTTGCTTCAGTTTTTCATTTGTGTTCATTCTTTCAGTGATATTTATGGCCTTAGAAGTTATGTTTTCCTCAATCTTCTAAAGATTAACAATCTTTTGTTTCCATTGTCGATTCATAGTTTGGTTTCTTACTCTTGGAAACTTGAAGAAAAATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAGGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCGCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCGCCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGTATTATCTCATTCTACCGTTTGTGTTGATGACTTTGGTAATTAAAATTCTCTTTTAGTTGATTTAATATGAATTTCAATGCTATATTTTCTAAAACCACCCTATAATTCAGGACTAAAAATGTACTTGAATTGAAACTTTATACACTAAAAATTCTCCCTAATTTGGATCCTTTAATTTTTTAGAATTTTAAATTTTTTTTGCGTATGAAGCTAGGGGGTTGTTGGTTATCGTCATGATTTTTCGTTACAGGCCACGGAGGCCATGGACTCGGCATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCTGCTTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGTAGGCAAGTTCAAGAAATGGAAGTGATAAAATTGCTGGAAGCTTATTATATGTGAGTTCTTAGTCCAAAACCTTTTTAAAAAATAATAATAAATATTGTATTTTAATGCTTGTGTTTATTTCATTACATTGGGGCTTCTTTTTGTAAAGATTTCAACAATTTTATTATTATATATAATTTTATCTTTATTTCCCTGTTGATAGATGTGATAATTTGTGATTTTAAAACATTTAAAATAATTCAAAATTAATTTAATGTTTAATTTTAGATAATATTAAACGCAATTTGAACAATTCAAAATAATAAACT

mRNA sequence

TATTCATTTATCTTGATTGTGATCATATTCTCCTGAATTTCACTCTGATGATTTTCTTCTTCTTTCTGTTCGTTTTTCGCTCTCTCCGGAACTTTTTGGACTGCGTTCTGGAAATCGATTGAATGTGTGGTTAAAGATCATTTCATGTTCGAGTTTGTCGGTGTTCTTCAGGTCCTCTTGCTTTTTATCGCTTGTCCTCACGATAGATAACAACATTAGAAAAGAGTTGTTGATCCATTCTGTTGCGAATGATTTTGCTAGATAATCGGTTGAAGCAACGGGTTGAGTTATCAATTCCTTTGTTTGATTGTTCTTGGTGTAGATATGTGATTTTAGCTACGAGTTAATCTTATTCGATCCAATGTAATTTTAGTCAGTCTTGAATTTTGTTTGGTATCAACAGAATCAAATGGAGTCTTCGCATATCAATTCCTTTGTTTGATTGTTCTTGAATTTTGCTTCAGTTTTTCATTTGTGTTCATTCTTTCAGTGATATTTATGGCCTTAGAAGTTATGTTTTCCTCAATCTTCTAAAGATTAACAATCTTTTGTTTCCATTGTCGATTCATAGTTTGGTTTCTTACTCTTGGAAACTTGAAGAAAAATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAGGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCGCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCGCCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGCCACGGAGGCCATGGACTCGGCATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCTGCTTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGTAGGCAAGTTCAAGAAATGGAAGTGATAAAATTGCTGGAAGCTTATTATATGTGAGTTCTTAGTCCAAAACCTTTTTAAAAAATAATAATAAATATTGTATTTTAATGCTTGTGTTTATTTCATTACATTGGGGCTTCTTTTTGTAAAGATTTCAACAATTTTATTATTATATATAATTTTATCTTTATTTCCCTGTTGATAGATGTGATAATTTGTGATTTTAAAACATTTAAAATAATTCAAAATTAATTTAATGTTTAATTTTAGATAATATTAAACGCAATTTGAACAATTCAAAATAATAAACT

Coding sequence (CDS)

ATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAGGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCGCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCGCCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGCCACGGAGGCCATGGACTCGGCATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCTGCTTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGTAGGCAAGTTCAAGAAATGGAAGTGA

Protein sequence

MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK
Homology
BLAST of Carg14853 vs. NCBI nr
Match: KAG7018928.1 (hypothetical protein SDJN02_20805 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.6 bits (849), Expect = 3.8e-87
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120
           YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA
Sbjct: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120

Query: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK
Sbjct: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 168

BLAST of Carg14853 vs. NCBI nr
Match: KAG6582545.1 (hypothetical protein SDJN03_22547, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPA YPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAGYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120
           YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA
Sbjct: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120

Query: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK
Sbjct: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 168

BLAST of Carg14853 vs. NCBI nr
Match: XP_022980434.1 (glycine-rich protein A3-like [Cucurbita maxima] >XP_022980435.1 glycine-rich protein A3-like [Cucurbita maxima])

HSP 1 Score: 327.4 bits (838), Expect = 7.2e-86
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPA YPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAGYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120
           YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA
Sbjct: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120

Query: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHG GKFKKWK
Sbjct: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGGGKFKKWK 168

BLAST of Carg14853 vs. NCBI nr
Match: XP_022924320.1 (glycine-rich protein A3-like [Cucurbita moschata] >XP_022924321.1 glycine-rich protein A3-like [Cucurbita moschata])

HSP 1 Score: 327.0 bits (837), Expect = 9.4e-86
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPA YPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAGYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120
           YPPAAYPPPGGYPPAAY PPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA
Sbjct: 61  YPPAAYPPPGGYPPAAYQPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120

Query: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK
Sbjct: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 168

BLAST of Carg14853 vs. NCBI nr
Match: XP_023527127.1 (glycine-rich protein A3-like [Cucurbita pepo subsp. pepo] >XP_023527129.1 glycine-rich protein A3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 166/174 (95.40%), Postives = 166/174 (95.40%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGL------G 120
           YPPAAYPPPGGYP AAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGL      G
Sbjct: 61  YPPAAYPPPGGYPSAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGFGHGSG 120

Query: 121 MGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           MGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHG GKFKKWK
Sbjct: 121 MGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGGGKFKKWK 174

BLAST of Carg14853 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-21
Identity = 81/155 (52.26%), Postives = 92/155 (59.35%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGG     +DKGLFS++A   AG  +  P  YPP    A  GYPP  GYPPA     GG
Sbjct: 1   MGGGDGHNDQDKGLFSNLAGGLAGGGHYPPGQYPP----AAGGYPPQ-GYPPAG----GG 60

Query: 61  YPPAAYPPP-GGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLL 120
           YPP  YPP  GGYPP  YPP GG    GYPP G YPPAG+ +    P H GHG G+ G++
Sbjct: 61  YPPQGYPPAGGGYPPQGYPPAGG----GYPPQG-YPPAGHHSGSSAPHHSGHG-GVAGMV 120

Query: 121 AGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFG 155
           AGG AAAAAAYG HH+        GHG + HG  G
Sbjct: 121 AGGRAAAAAAYGVHHMTQGHGSHGGHGGYAHGAMG 140

BLAST of Carg14853 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05
Identity = 47/101 (46.53%), Postives = 52/101 (51.49%), Query Frame = 0

Query: 2   GGGKEEESKDKGLFSSMASFAAGQHYSHPHG-YPPPPPYAGAGYPPP---GGYPPAAYPP 61
           GG   + ++ K + + M      Q    P G YPP   Y   GYPPP   GGYPP  YPP
Sbjct: 361 GGESADAAQMKEMMAMMQKMQQQQAAYPPQGAYPPQGGYPPQGYPPPPAQGGYPPQGYPP 420

Query: 62  PGGYPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAG 99
               PP  YPP  GYPP  YPPP G PP G PP  A PP G
Sbjct: 421 ----PPQGYPPAQGYPPQGYPPPQGAPPQGAPPQAA-PPQG 456

BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A6J1IZ97 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111479802 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.5e-86
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPA YPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAGYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120
           YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA
Sbjct: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120

Query: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHG GKFKKWK
Sbjct: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGGGKFKKWK 168

BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A6J1E983 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111431848 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPA YPPPGG
Sbjct: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAGYPPPGG 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120
           YPPAAYPPPGGYPPAAY PPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA
Sbjct: 61  YPPAAYPPPGGYPPAAYQPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLA 120

Query: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 169
           GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK
Sbjct: 121 GGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK 168

BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A1S3AWG9 (glycine-rich protein A3 OS=Cucumis melo OX=3656 GN=LOC103483379 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55
Identity = 127/171 (74.27%), Postives = 133/171 (77.78%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKE E KDKGLFS+MA+FAAG HY H HGY PPPPY GAGYPPPGGYPPA       
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGY-PPPPYGGAGYPPPGGYPPA------- 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHG-GHGLGMGGLL 120
                     GYPPA YPP GG+P   YP  G YPPAGYP PHHYPG+G GHG G+GGLL
Sbjct: 61  ----------GYPPAGYPPYGGHPHTAYPYQGGYPPAGYPGPHHYPGYGHGHGHGVGGLL 120

Query: 121 AGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHG--VGKFKKWK 169
           AGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHG   G+FKKWK
Sbjct: 121 AGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGGKFGRFKKWK 153

BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A0A0L4F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126870 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.3e-53
Identity = 127/176 (72.16%), Postives = 133/176 (75.57%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGG 60
           MGGGKE E KDKGLFS+MA+FAAG HY H HGY PPPPY GA YPPPGGYPP       G
Sbjct: 1   MGGGKENEDKDKGLFSNMAAFAAGHHYPHHHGY-PPPPYGGAAYPPPGGYPPP------G 60

Query: 61  YPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHG---GHGLGMGG 120
           YPP  YPP GG+P  AYPPPGG           YPPAGYP PHHYPG+G   GHG G+GG
Sbjct: 61  YPPTGYPPYGGHPHTAYPPPGG-----------YPPAGYPGPHHYPGYGHGYGHGHGVGG 120

Query: 121 LLAGGAAAAAAAYGAHHLAHARPFGFG-----HGKFKHGKFGKRWKHGVGKFKKWK 169
           LLAGGAAAAAAAYGAHHLAHARPFGFG     HGKFKHGKFGKRWKHG  +FKKWK
Sbjct: 121 LLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFKHGKFGKRWKHGGMRFKKWK 158

BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A6J1D180 (glycine-rich protein A3 OS=Momordica charantia OX=3673 GN=LOC111016059 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.6e-53
Identity = 125/176 (71.02%), Postives = 136/176 (77.27%), Query Frame = 0

Query: 1   MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGY-PPPPPYAGAGYPPPGGYPPAAYPPPG 60
           MGGGKE++S ++GLFS + +FAAG HY H HGY PPPPPY GAGYPPPGGYPPA YPPPG
Sbjct: 1   MGGGKEKDSDERGLFSHLGAFAAGHHYPHNHGYPPPPPPYPGAGYPPPGGYPPAGYPPPG 60

Query: 61  GYPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLL 120
           GYPPA Y P GG+PP+AYP PGG           YPPAGYP PHH+PGHG    GMG +L
Sbjct: 61  GYPPAGYHPHGGHPPSAYPYPGG-----------YPPAGYPGPHHHPGHGH---GMGAML 120

Query: 121 AGGAAAAAAAYGAHHLAHARPFGFG-----HGKFKHGKFGKRWKHG--VGKFKKWK 169
           AGGAAAAAAAYGAHHL HARPFGFG     HGKFKHGKFGKRWKHG    KFK+WK
Sbjct: 121 AGGAAAAAAAYGAHHLVHARPFGFGHGKFKHGKFKHGKFGKRWKHGGKFMKFKRWK 162

BLAST of Carg14853 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.7e-27
Identity = 104/209 (49.76%), Postives = 113/209 (54.07%), Query Frame = 0

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYP------ 62
           GG  +  KDKG                 HGYPP      AGYPPPG YPPA YP      
Sbjct: 2   GGDNDNDKDKGF----------------HGYPP------AGYPPPGAYPPAGYPQQGYPP 61

Query: 63  -----PPGGYPPAAYPP-PGGYPPAAYPPPGGYPPA----GYPP---HGAYPPAGYPAPH 122
                PP GYPP AYPP PGGYPPA  P  GGYPPA    GYPP   HG YPPAGYPA  
Sbjct: 62  PPGAYPPAGYPPGAYPPAPGGYPPA--PGYGGYPPAPGYGGYPPAPGHGGYPPAGYPA-- 121

Query: 123 HYPGHGGHGLGMGGLLAGGAAAAAAAYGAHHLAHAR-------------------PFGFG 169
           H+ GH G   G+GG++AG    AAAAYGAHH+AH+                     +G G
Sbjct: 122 HHSGHAG---GIGGMIAG----AAAAYGAHHVAHSSHGPYGHAAYGHGFGHGHGYGYGHG 177

BLAST of Carg14853 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.7e-27
Identity = 104/209 (49.76%), Postives = 113/209 (54.07%), Query Frame = 0

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYP------ 62
           GG  +  KDKG                 HGYPP      AGYPPPG YPPA YP      
Sbjct: 2   GGDNDNDKDKGF----------------HGYPP------AGYPPPGAYPPAGYPQQGYPP 61

Query: 63  -----PPGGYPPAAYPP-PGGYPPAAYPPPGGYPPA----GYPP---HGAYPPAGYPAPH 122
                PP GYPP AYPP PGGYPPA  P  GGYPPA    GYPP   HG YPPAGYPA  
Sbjct: 62  PPGAYPPAGYPPGAYPPAPGGYPPA--PGYGGYPPAPGYGGYPPAPGHGGYPPAGYPA-- 121

Query: 123 HYPGHGGHGLGMGGLLAGGAAAAAAAYGAHHLAHAR-------------------PFGFG 169
           H+ GH G   G+GG++AG    AAAAYGAHH+AH+                     +G G
Sbjct: 122 HHSGHAG---GIGGMIAG----AAAAYGAHHVAHSSHGPYGHAAYGHGFGHGHGYGYGHG 177

BLAST of Carg14853 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 100/206 (48.54%), Postives = 112/206 (54.37%), Query Frame = 0

Query: 1   MGGGKEE--ESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPP-PGGYPPAAYPP 60
           MGGGK++  + ++KG                 HG+P      G  YPP  GGYPP  YPP
Sbjct: 1   MGGGKDKHHDEQEKGF----------------HGFP-----GGGHYPPAQGGYPPQGYPP 60

Query: 61  PGGYPPAAYPPPGGYPPAAYP-PPGGYPPAGYPPHGAYPPAGYPAP-HHYPGHGGHGLGM 120
             GYPPA   PP GYPP AYP  PGGYPPA     G YPPAGYPAP  H+ GH G GL  
Sbjct: 61  QQGYPPAGGYPPAGYPPGAYPAAPGGYPPA----PGGYPPAGYPAPGAHHSGHSGGGL-- 120

Query: 121 GGLLAGGAAAAAAAYGAHHLAHA--RPF---------------GFGH------------G 169
           GG++AG A AAAAAYGAHH+ HA   P+               GFGH            G
Sbjct: 121 GGMIAGAAGAAAAAYGAHHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGG 179

BLAST of Carg14853 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 96/184 (52.17%), Postives = 108/184 (58.70%), Query Frame = 0

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYP 62
           G  +    D+G F ++A FA GQ+  H HGY     + G GY     YPP   PPP GYP
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQYPPHGHGY----GHHGHGYGSSYPYPPP--PPPHGYP 61

Query: 63  PAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLAGG 122
           P AYPP GGYPPA Y PP GYPPAGYP HG YP  GYP P H   H G   G+G ++AGG
Sbjct: 62  PVAYPPHGGYPPAGY-PPAGYPPAGYPAHG-YPSHGYPRPSHSGHHHG---GIGAIIAGG 121

Query: 123 AAAAAAA---------YGAHHLAHARPFGF-GHGKFKHGKF--GKRWKHGV-----GK-F 169
            AAAA A         YG HH  H   +G+ GHGKFKHGKF  GK  KHG+     GK F
Sbjct: 122 VAAAAGAHHMSHHHGHYGHHH-GHGYGYGYHGHGKFKHGKFKHGKFGKHGMFGKHKGKFF 173

BLAST of Carg14853 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 89/176 (50.57%), Postives = 97/176 (55.11%), Query Frame = 0

Query: 3   GGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYP 62
           G  +   +DK  FS         H  H HGYPP        YPPP   P  AYPPPGGYP
Sbjct: 2   GKDDHHEQDKRFFS--------HHNHHGHGYPP------GAYPPP---PQGAYPPPGGYP 61

Query: 63  PAAY-PPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPH-HYPGHGGHGLGMGGLLA 122
           P  Y PPP GYPPAAYP          PP GAYPPAGYP P    PG GG   G+GGL+A
Sbjct: 62  PQGYPPPPHGYPPAAYP----------PPPGAYPPAGYPGPSGPRPGFGG---GVGGLIA 121

Query: 123 GGAAAAAAAYGAHHLAHARPFG-FGHGKFKHGKFG----KRWKH---GVGKFKKWK 169
           G A AAAAA G HH  H   +G  GHGK+K G FG    KR KH   G GK+K+ K
Sbjct: 122 GAATAAAAAMGGHHAGHHGGYGHHGHGKYKRGFFGGGKYKRGKHSMFGGGKYKRGK 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7018928.13.8e-87100.00hypothetical protein SDJN02_20805 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6582545.11.1e-8699.40hypothetical protein SDJN03_22547, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022980434.17.2e-8698.81glycine-rich protein A3-like [Cucurbita maxima] >XP_022980435.1 glycine-rich pro... [more]
XP_022924320.19.4e-8698.81glycine-rich protein A3-like [Cucurbita moschata] >XP_022924321.1 glycine-rich p... [more]
XP_023527127.12.0e-8395.40glycine-rich protein A3-like [Cucurbita pepo subsp. pepo] >XP_023527129.1 glycin... [more]
Match NameE-valueIdentityDescription
P377054.9e-2152.26Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1[more]
O160052.2e-0546.53Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1IZ973.5e-8698.81glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111479802 PE=4 SV... [more]
A0A6J1E9834.6e-8698.81glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111431848 PE=4 ... [more]
A0A1S3AWG91.9e-5574.27glycine-rich protein A3 OS=Cucumis melo OX=3656 GN=LOC103483379 PE=4 SV=1[more]
A0A0A0L4F22.3e-5372.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126870 PE=4 SV=1[more]
A0A6J1D1806.6e-5371.02glycine-rich protein A3 OS=Momordica charantia OX=3673 GN=LOC111016059 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G45350.14.7e-2749.76proline-rich family protein [more]
AT5G45350.24.7e-2749.76proline-rich family protein [more]
AT4G19200.12.6e-2548.54proline-rich family protein [more]
AT5G17650.12.6e-2552.17glycine/proline-rich protein [more]
AT1G31750.11.7e-2150.57proline-rich family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31248DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATEDcoord: 54..168
coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14853-RACarg14853-RAmRNA