Carg14853 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTCATTTATCTTGATTGTGATCATATTCTCCTGAATTTCACTCTGATGATTTTCTTCTTCTTTCTGTTCGTTTTTCGCTCTCTCCGGAACTTTTTGGACTGCGTTCTGGAAATCGATTGAATGTGTGGTTAAAGATCATTTCATGTTCGAGTTTGTCGGTGTTCTTCAGGTCCTCTTGCTTTTTATCGCTTGTCCTCACGATAGATAACAACATTAGAAAAGAGTTGTTGATCCATTCTGTTGCGAATGATTTTGCTAGATAATCGGTTGAAGCAACGGGTTGAGTTATCAATTCCTTTGTTTGATTGTTCTTGGTGTAGATATGTGATTTTAGCTACGAGTTAATCTTATTCGATCCAATGTAATTTTAGTCAGTCTTGAATTTTGTTTGGTATCAACAGAATCAAATGGAGTCTTCGCATATCAATTCCTTTGTTTGATTGTTCTTGAATTTTGCTTCAGTTTTTCATTTGTGTTCATTCTTTCAGTGATATTTATGGCCTTAGAAGTTATGTTTTCCTCAATCTTCTAAAGATTAACAATCTTTTGTTTCCATTGTCGATTCATAGTTTGGTTTCTTACTCTTGGAAACTTGAAGAAAAATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAGGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCGCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCGCCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGTATTATCTCATTCTACCGTTTGTGTTGATGACTTTGGTAATTAAAATTCTCTTTTAGTTGATTTAATATGAATTTCAATGCTATATTTTCTAAAACCACCCTATAATTCAGGACTAAAAATGTACTTGAATTGAAACTTTATACACTAAAAATTCTCCCTAATTTGGATCCTTTAATTTTTTAGAATTTTAAATTTTTTTTGCGTATGAAGCTAGGGGGTTGTTGGTTATCGTCATGATTTTTCGTTACAGGCCACGGAGGCCATGGACTCGGCATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCTGCTTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGTAGGCAAGTTCAAGAAATGGAAGTGATAAAATTGCTGGAAGCTTATTATATGTGAGTTCTTAGTCCAAAACCTTTTTAAAAAATAATAATAAATATTGTATTTTAATGCTTGTGTTTATTTCATTACATTGGGGCTTCTTTTTGTAAAGATTTCAACAATTTTATTATTATATATAATTTTATCTTTATTTCCCTGTTGATAGATGTGATAATTTGTGATTTTAAAACATTTAAAATAATTCAAAATTAATTTAATGTTTAATTTTAGATAATATTAAACGCAATTTGAACAATTCAAAATAATAAACT TATTCATTTATCTTGATTGTGATCATATTCTCCTGAATTTCACTCTGATGATTTTCTTCTTCTTTCTGTTCGTTTTTCGCTCTCTCCGGAACTTTTTGGACTGCGTTCTGGAAATCGATTGAATGTGTGGTTAAAGATCATTTCATGTTCGAGTTTGTCGGTGTTCTTCAGGTCCTCTTGCTTTTTATCGCTTGTCCTCACGATAGATAACAACATTAGAAAAGAGTTGTTGATCCATTCTGTTGCGAATGATTTTGCTAGATAATCGGTTGAAGCAACGGGTTGAGTTATCAATTCCTTTGTTTGATTGTTCTTGGTGTAGATATGTGATTTTAGCTACGAGTTAATCTTATTCGATCCAATGTAATTTTAGTCAGTCTTGAATTTTGTTTGGTATCAACAGAATCAAATGGAGTCTTCGCATATCAATTCCTTTGTTTGATTGTTCTTGAATTTTGCTTCAGTTTTTCATTTGTGTTCATTCTTTCAGTGATATTTATGGCCTTAGAAGTTATGTTTTCCTCAATCTTCTAAAGATTAACAATCTTTTGTTTCCATTGTCGATTCATAGTTTGGTTTCTTACTCTTGGAAACTTGAAGAAAAATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAGGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCGCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCGCCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGCCACGGAGGCCATGGACTCGGCATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCTGCTTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGTAGGCAAGTTCAAGAAATGGAAGTGATAAAATTGCTGGAAGCTTATTATATGTGAGTTCTTAGTCCAAAACCTTTTTAAAAAATAATAATAAATATTGTATTTTAATGCTTGTGTTTATTTCATTACATTGGGGCTTCTTTTTGTAAAGATTTCAACAATTTTATTATTATATATAATTTTATCTTTATTTCCCTGTTGATAGATGTGATAATTTGTGATTTTAAAACATTTAAAATAATTCAAAATTAATTTAATGTTTAATTTTAGATAATATTAAACGCAATTTGAACAATTCAAAATAATAAACT ATGGGAGGCGGGAAGGAAGAGGAAAGTAAAGACAAGGGCCTGTTTTCAAGTATGGCGTCGTTTGCTGCAGGGCAGCACTATTCGCATCCTCATGGATATCCACCACCACCACCGTACGCAGGAGCTGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGCGTATCCGCCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCTCCGGCTGCGTATCCACCTCCTGGCGGATATCCACCGGCTGGCTATCCTCCTCACGGTGCATACCCTCCCGCTGGCTATCCTGCCCCCCATCATTACCCTGGCCACGGAGGCCATGGACTCGGCATGGGGGGGTTGTTGGCTGGTGGTGCAGCTGCTGCAGCCGCTGCTTACGGCGCTCATCATCTTGCTCATGCACGCCCATTTGGGTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGTAGGCAAGTTCAAGAAATGGAAGTGA MGGGKEEESKDKGLFSSMASFAAGQHYSHPHGYPPPPPYAGAGYPPPGGYPPAAYPPPGGYPPAAYPPPGGYPPAAYPPPGGYPPAGYPPHGAYPPAGYPAPHHYPGHGGHGLGMGGLLAGGAAAAAAAYGAHHLAHARPFGFGHGKFKHGKFGKRWKHGVGKFKKWK Homology
BLAST of Carg14853 vs. NCBI nr
Match: KAG7018928.1 (hypothetical protein SDJN02_20805 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 331.6 bits (849), Expect = 3.8e-87 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg14853 vs. NCBI nr
Match: KAG6582545.1 (hypothetical protein SDJN03_22547, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg14853 vs. NCBI nr
Match: XP_022980434.1 (glycine-rich protein A3-like [Cucurbita maxima] >XP_022980435.1 glycine-rich protein A3-like [Cucurbita maxima]) HSP 1 Score: 327.4 bits (838), Expect = 7.2e-86 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Carg14853 vs. NCBI nr
Match: XP_022924320.1 (glycine-rich protein A3-like [Cucurbita moschata] >XP_022924321.1 glycine-rich protein A3-like [Cucurbita moschata]) HSP 1 Score: 327.0 bits (837), Expect = 9.4e-86 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Carg14853 vs. NCBI nr
Match: XP_023527127.1 (glycine-rich protein A3-like [Cucurbita pepo subsp. pepo] >XP_023527129.1 glycine-rich protein A3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83 Identity = 166/174 (95.40%), Postives = 166/174 (95.40%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.9e-21 Identity = 81/155 (52.26%), Postives = 92/155 (59.35%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05 Identity = 47/101 (46.53%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A6J1IZ97 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111479802 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 3.5e-86 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A6J1E983 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111431848 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A1S3AWG9 (glycine-rich protein A3 OS=Cucumis melo OX=3656 GN=LOC103483379 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55 Identity = 127/171 (74.27%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A0A0L4F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126870 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.3e-53 Identity = 127/176 (72.16%), Postives = 133/176 (75.57%), Query Frame = 0
BLAST of Carg14853 vs. ExPASy TrEMBL
Match: A0A6J1D180 (glycine-rich protein A3 OS=Momordica charantia OX=3673 GN=LOC111016059 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.6e-53 Identity = 125/176 (71.02%), Postives = 136/176 (77.27%), Query Frame = 0
BLAST of Carg14853 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 118.6 bits (296), Expect = 4.7e-27 Identity = 104/209 (49.76%), Postives = 113/209 (54.07%), Query Frame = 0
BLAST of Carg14853 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein ) HSP 1 Score: 118.6 bits (296), Expect = 4.7e-27 Identity = 104/209 (49.76%), Postives = 113/209 (54.07%), Query Frame = 0
BLAST of Carg14853 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein ) HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25 Identity = 100/206 (48.54%), Postives = 112/206 (54.37%), Query Frame = 0
BLAST of Carg14853 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25 Identity = 96/184 (52.17%), Postives = 108/184 (58.70%), Query Frame = 0
BLAST of Carg14853 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21 Identity = 89/176 (50.57%), Postives = 97/176 (55.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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