Homology
BLAST of Carg12438 vs. NCBI nr
Match:
KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1001.5 bits (2588), Expect = 2.5e-288
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. NCBI nr
Match:
XP_023528121.1 (pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 994.2 bits (2569), Expect = 4.0e-286
Identity = 487/492 (98.98%), Postives = 489/492 (99.39%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
L LKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV
Sbjct: 121 LGLKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTA+MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTAVMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
RSWKEKDLLEDAHQVFEKMKNELQV+DRSTYGLLIQALCSGNRT EALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVVDRSTYGLLIQALCSGNRTCEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. NCBI nr
Match:
KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 991.5 bits (2562), Expect = 2.6e-285
Identity = 486/492 (98.78%), Postives = 489/492 (99.39%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MR+ALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL
Sbjct: 1 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL+NAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
R+WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. NCBI nr
Match:
XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])
HSP 1 Score: 989.6 bits (2557), Expect = 9.9e-285
Identity = 484/492 (98.37%), Postives = 488/492 (99.19%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MR+ALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVH SPFKL
Sbjct: 1 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL+NAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
R+WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDL+IEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. NCBI nr
Match:
XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 961.8 bits (2485), Expect = 2.2e-276
Identity = 474/492 (96.34%), Postives = 477/492 (96.95%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MRLALRPSFLTTLPLSSTDTPFGANFIE N R SANKRPHSVCNGG SFNHHVHASPFKL
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVAD IKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
LALKLLSNL+SYGLVPN RTFSIMIRCYCKKGDLDNAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTALMDGLCKVGRSDEAMELLSEAE NGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLL GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
R+WKEKDLLEDAHQVFEKMKNE QVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
P AITIDVMVQALCHSG ASEALCVLGHGIRFSRISFDLIIEELNEEGMW SAC+VYGLA
Sbjct: 421 PWAITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 1.9e-49
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 0
Query: 106 FNDLFMEFVSEDELDLALKLLSNL-SSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQM 165
FN L FV+ LD A +LS++ +SYG+VP+ T++ +I Y K+G + A VL M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 166 LGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRV 225
GC PN + T+LV+ FCK GK+ +A+ ++ + +G KP +NCL+ C R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 226 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTL 285
EA E+ EM + PD+YT+ +L+ GLC+V A+ LL + GV + VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 286 FNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGH 345
N + + G + +++ +M D I+Y++L++GL + G++ A +++M+ GH
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 346 SIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRT 405
+ N + LCR ++E+A + ++M D T+ LI LC R
Sbjct: 596 APSNISCNILINGLCR-----SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 655
Query: 406 SEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGI 451
+ L + +G P +T + ++ LC G +A +L GI
Sbjct: 656 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 5.6e-49
Identity = 109/344 (31.69%), Postives = 186/344 (54.07%), Query Frame = 0
Query: 102 NICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVL 161
++ FN L +L A+ +L ++ SYGLVP+ +TF+ +++ Y ++GDLD A R+
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 162 GQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMV-ELVGRNGRKPTVQAYNCLLKGLCY 221
QM+ GC+ ++ ++ V+V+ FCK G+++ A + E+ ++G P +N L+ GLC
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 222 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVT 281
G V+ A E++ M ++ PD+YTY +++ GLCK+G EA+E+L + P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 282 FNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMV 341
+NTL + CKE + + + + + PD ++++L+QGL R A+ ++EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 342 SSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRS--TYGLLIQAL 401
S G +E N + +LC K L++A + ++M EL RS TY LI
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGF 487
Query: 402 CSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 443
C N+T EA M G S ++T + ++ LC S +A
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match:
Q3ECK2 (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62680 PE=2 SV=2)
HSP 1 Score: 193.7 bits (491), Expect = 4.8e-48
Identity = 125/467 (26.77%), Postives = 222/467 (47.54%), Query Frame = 0
Query: 25 NFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQIPTRMTIQNVADTIKSLPIPS 84
N +E +A+ S C+ S V AS G + R++ + D I
Sbjct: 16 NLLENGKPRTASSPSFSHCS---SCRCWVRASSSVSGGDLRERLSKTRLRD------IKL 75
Query: 85 EEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIM 144
+ ++F KS +I +FN L V + D+ + L + G+ + TF+I+
Sbjct: 76 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 135
Query: 145 IRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGR 204
I C+C + A +LG+ML G P+ TI LVN FC+R ++ A +V+ + G
Sbjct: 136 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 195
Query: 205 KPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 264
KP + AYN ++ LC RV +A + E+++ + P++ TYTAL++GLC R +A
Sbjct: 196 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 255
Query: 265 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLI 324
LLS+ + + P+V+T++ L + + K G+ L+ + ++M +M+ PD ++YS+L+ GL
Sbjct: 256 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 315
Query: 325 KWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQ 384
+I A + + MVS G + NT + C+ +ED ++F +M
Sbjct: 316 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-----RVEDGMKLFREMSQRGL 375
Query: 385 VIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALC 444
V + TY LIQ +A M G SP T ++++ LC +G +AL
Sbjct: 376 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 435
Query: 445 VL----GHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKP 488
+ + +++ +I + + G A +++ +G+KP
Sbjct: 436 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 2.4e-47
Identity = 112/367 (30.52%), Postives = 184/367 (50.14%), Query Frame = 0
Query: 106 FNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQML 165
+N + S +LDLALK+L+ L S P T++I+I +G +D A +++ +ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 166 GSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVE 225
G P+ T ++ CK G + +AFEMV + G +P V +YN LL+ L G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 226 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLF 285
E +++T+M + P++ TY+ L+ LC+ G+ +EAM LL ++ G+ P +++ L
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 286 NGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHS 345
+C+EGR I L+ M C PD ++Y+T+L L K GK AL + ++ G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 346 IEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTS 405
NT AL W D + H + E M N + D TY +I LC
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495
Query: 406 EALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVL----GHGIRFSRISFDLII 465
EA L M + P +T ++++ C + +A+ VL G+G R + ++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555
Query: 466 EELNEEG 469
E + G
Sbjct: 556 EGIGFAG 557
BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match:
P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 2.4e-47
Identity = 110/400 (27.50%), Postives = 198/400 (49.50%), Query Frame = 0
Query: 82 IPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 141
I ++ +F +S + ++ +F+ F + +L L L G+ N T
Sbjct: 67 IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 142 SIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGR 201
+IMI C+C+ A VLG+++ G P+ T L+ GK+ +A +V+ +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 202 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 261
NG +P V YN ++ G+C G A +++ +M++ ++ D++TY+ ++D LC+ G D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 262 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 321
A+ L E E G+K SVVT+N+L G CK G+ DG +LK M P+ I+++ LL
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 322 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKN 381
+K GK++ A YKEM++ G S NT M C ++ L +A+ + + M
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVR 366
Query: 382 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSG--GA 441
D T+ LI+ C R + + ++ +G A+T ++VQ C SG
Sbjct: 367 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 426
Query: 442 SEALC--VLGHGIRFSRISFDLIIEELNEEGMWFSACNVY 478
+E L ++ HG+ +++ ++++ L + G A ++
Sbjct: 427 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
BLAST of Carg12438 vs. ExPASy TrEMBL
Match:
A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)
HSP 1 Score: 989.6 bits (2557), Expect = 4.8e-285
Identity = 484/492 (98.37%), Postives = 488/492 (99.19%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MR+ALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVH SPFKL
Sbjct: 1 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL+NAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
R+WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDL+IEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. ExPASy TrEMBL
Match:
A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)
HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 474/492 (96.34%), Postives = 477/492 (96.95%), Query Frame = 0
Query: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
MRLALRPSFLTTLPLSSTDTPFGANFIE N R SANKRPHSVCNGG SFNHHVHASPFKL
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60
Query: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
GIQIPTRMTIQNVAD IKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61 GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
LALKLLSNL+SYGLVPN RTFSIMIRCYCKKGDLDNAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180
Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
PDIYTYTALMDGLCKVGRSDEAMELLSEAE NGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
LKKMKQMNCTPDRISYSTLL GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
R+WKEKDLLEDAHQVFEKMKNE QVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
P AITIDVMVQALCHSG ASEALCVLGHGIRFSRISFDLIIEELNEEGMW SAC+VYGLA
Sbjct: 421 PWAITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSVYGLA 480
Query: 481 LKRGIKPTKRPR 493
LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492
BLAST of Carg12438 vs. ExPASy TrEMBL
Match:
A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)
HSP 1 Score: 759.2 bits (1959), Expect = 1.1e-215
Identity = 377/490 (76.94%), Postives = 420/490 (85.71%), Query Frame = 0
Query: 13 LPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSF-NHHVHASPFKLGIQIPTRMTIQ 72
LPLSST NFIEENGRLS NK+ HS N G F +V+A PFKL I+ P R+T++
Sbjct: 9 LPLSST----SVNFIEENGRLSPNKQSHSNRNRGPGFGGDNVYALPFKLEIENPRRITVK 68
Query: 73 NVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSS 132
N A I SLP PS+EGTE+F SQK CEIQNI EFNDLF +FVS +ELDLAL+LLSN+SS
Sbjct: 69 NEAGRIGSLPTPSKEGTEMFITSQKDCEIQNISEFNDLFADFVSAEELDLALRLLSNISS 128
Query: 133 YGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQK 192
YGLVPN RTFSI IRCYCKKGDLDNA RV QMLGSGCNPNDAT+TVLVNA C+RGK+++
Sbjct: 129 YGLVPNSRTFSIAIRCYCKKGDLDNAKRVFDQMLGSGCNPNDATVTVLVNALCRRGKIKR 188
Query: 193 AFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMD 252
A EMVELVGR GRK TV+ YNCLLKGLCYVGRVEEACEMV +MKKD L+PDIYTYTALMD
Sbjct: 189 ALEMVELVGRIGRKQTVRTYNCLLKGLCYVGRVEEACEMVAKMKKDGLVPDIYTYTALMD 248
Query: 253 GLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTP 312
GLCKVGRSDEAMELL+EAE+NG++PSVVTFNTLFNGYCKEGRPLDGI VLKKMKQMNC P
Sbjct: 249 GLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNCMP 308
Query: 313 DRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLED 372
DRISY+TLL GLIKWGKIRTALRTYKEMVSSGHS+EEKMMNTFMRALCRRSWKEKDLLED
Sbjct: 309 DRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLLED 368
Query: 373 AHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQ 432
AHQVFEKMKNE QVI RSTYG++I ALCSGN+ SEA+ANLHHMI KGYSPRAITI+V+V+
Sbjct: 369 AHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVVVE 428
Query: 433 ALCHSGGASEALCVLG---------HGIRFSRISFDLIIEELNEEGMWFSACNVYGLALK 492
ALC G +EAL V+G H I FSR+S+DLII+ELN++GMWF AC VYGLALK
Sbjct: 429 ALCRRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYGLALK 488
BLAST of Carg12438 vs. ExPASy TrEMBL
Match:
A0A2I4EIR4 (pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108989956 PE=4 SV=1)
HSP 1 Score: 503.8 bits (1296), Expect = 8.0e-139
Identity = 272/493 (55.17%), Postives = 342/493 (69.37%), Query Frame = 0
Query: 10 LTTLPLSS---TDTP--FGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQI 69
L L LSS T+ P + + ++ R K H + ++ NH V P Q+
Sbjct: 46 LAALSLSSSNPTERPRLHTIHLLHDHYRFLPRKHSHLIY---VNRNHLV--DPRTSSFQV 105
Query: 70 PTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALK 129
P + TI SL P+EE TE K E + I FNDL M + +E DLALK
Sbjct: 106 P------DFVGTIGSL--PTEERTEFLTAYIKDTEFRTISNFNDLLMALLIAEEPDLALK 165
Query: 130 LLSNLSSYGLV-PNCRTFSIMIRCYCKKGDLDNAARVLGQMLGS-GCNPNDATITVLVNA 189
L S+LSSY + P+ TFSI+ RCYCKK LD A RVL M+ G +P+ ATIT+L+N
Sbjct: 166 LFSDLSSYASIEPDSWTFSIVSRCYCKKNHLDEAQRVLDHMVEERGFHPDVATITMLING 225
Query: 190 FCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPD 249
FCKRGK+Q+AFE++ +GR G +PTV+ YNCLLKG+CYVGRVEEA EM+ ++ K+S+ PD
Sbjct: 226 FCKRGKLQRAFELLHFMGRIGCEPTVRTYNCLLKGMCYVGRVEEAFEMLIKI-KESMKPD 285
Query: 250 IYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLK 309
IYTYTA+MDG CKVGRSDEAMELL EAE+ G+ P+VV++NTLF GYCKEGRPL+GI VLK
Sbjct: 286 IYTYTAVMDGFCKVGRSDEAMELLDEAEEMGLTPNVVSYNTLFQGYCKEGRPLEGIGVLK 345
Query: 310 KMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRS 369
+MKQ NC PD I YSTLL GL+KWGKIR+ALRTYKEMV G ++E+MMNTF+R LCRRS
Sbjct: 346 QMKQRNCMPDYICYSTLLHGLLKWGKIRSALRTYKEMVGDGFEVDERMMNTFLRRLCRRS 405
Query: 370 WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPR 429
WKEKD+LEDA+QVFEKMK VID STY L+IQALC+G + +AL NLH MI G+SP
Sbjct: 406 WKEKDMLEDAYQVFEKMKKRFYVIDLSTYSLMIQALCTGKKIEQALDNLHDMIRMGHSPP 465
Query: 430 AITIDVMVQALCHSGGASEALCVLG---HGIRF-SRISFDLIIEELNEEGMWFSACNVYG 489
IT + +++ALC G EAL VL G R +RIS++L+IEELN ACN+YG
Sbjct: 466 IITFNSIIRALCAGGRVDEALLVLALMDEGRRMPNRISYNLLIEELNRRKWLLGACNIYG 524
Query: 490 LALKRGIKPTKRP 492
+ALKRG+ P ++P
Sbjct: 526 MALKRGVIPNRKP 524
BLAST of Carg12438 vs. ExPASy TrEMBL
Match:
A0A5N6RKM0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1)
HSP 1 Score: 502.7 bits (1293), Expect = 1.8e-138
Identity = 251/423 (59.34%), Postives = 314/423 (74.23%), Query Frame = 0
Query: 75 DTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGL 134
DTI+ L P++ TE K E + + +FNDL M +E DLAL+L S++SSYG
Sbjct: 43 DTIRGL--PTKGRTEFLSTFFKDREFRTVSDFNDLVMALFIAEEPDLALELFSDMSSYGF 102
Query: 135 VPNCRTFSIMIRCYCKKGDLDNAARVLGQML-GSGCNPNDATITVLVNAFCKRGKMQKAF 194
P+ T SI+ RCYCKK LD A RVL QM+ G +P+ AT+T+L+N FCKRG++Q+AF
Sbjct: 103 EPDSWTLSIVSRCYCKKNHLDEAKRVLDQMVEEKGFHPDVATVTILINGFCKRGRLQRAF 162
Query: 195 EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGL 254
E+ + +GR G KPTVQ YNCLLKGLC+VGRVEEA EM+ ++KKDS+ PDIYTYTA+MDG
Sbjct: 163 EVFDFMGRIGCKPTVQTYNCLLKGLCFVGRVEEAFEMLIKIKKDSVKPDIYTYTAVMDGF 222
Query: 255 CKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDR 314
CKVGRSDEA+ELL EA + G+ P+VVT+NTLFNGYCKEGRPL GI VLK+MKQ NC PD
Sbjct: 223 CKVGRSDEAVELLDEAVEMGLTPNVVTYNTLFNGYCKEGRPLKGIGVLKQMKQRNCMPDY 282
Query: 315 ISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAH 374
I+YSTLL GL+KWGKIR+ALRTYKEMV G +E+MMNT +R LC+RSWKEKDLLE+A+
Sbjct: 283 ITYSTLLHGLLKWGKIRSALRTYKEMVGDGFEADERMMNTLLRGLCKRSWKEKDLLENAY 342
Query: 375 QVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQAL 434
Q+FEKMKN VID STYGL+++ALC G +T EAL NLH G+SP IT + +++AL
Sbjct: 343 QLFEKMKNGFYVIDLSTYGLMVKALCVGEKTEEALDNLHDFTRMGHSPHIITFNSVIRAL 402
Query: 435 CHSGGASEALCVL---GHGIRF-SRISFDLIIEELNEEGMWFSACNVYGLALKRGIKPTK 493
C G EAL VL G R +RIS++L+IEE N ACN+YG ALKRG+ P +
Sbjct: 403 CAEGRVDEALLVLILMDEGRRIPNRISYNLLIEECNRRKWLLGACNIYGAALKRGVIPDR 462
BLAST of Carg12438 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 198.4 bits (503), Expect = 1.4e-50
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 0
Query: 106 FNDLFMEFVSEDELDLALKLLSNL-SSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQM 165
FN L FV+ LD A +LS++ +SYG+VP+ T++ +I Y K+G + A VL M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 166 LGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRV 225
GC PN + T+LV+ FCK GK+ +A+ ++ + +G KP +NCL+ C R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 226 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTL 285
EA E+ EM + PD+YT+ +L+ GLC+V A+ LL + GV + VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 286 FNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGH 345
N + + G + +++ +M D I+Y++L++GL + G++ A +++M+ GH
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 346 SIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRT 405
+ N + LCR ++E+A + ++M D T+ LI LC R
Sbjct: 596 APSNISCNILINGLCR-----SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 655
Query: 406 SEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGI 451
+ L + +G P +T + ++ LC G +A +L GI
Sbjct: 656 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
BLAST of Carg12438 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 196.8 bits (499), Expect = 4.0e-50
Identity = 109/344 (31.69%), Postives = 186/344 (54.07%), Query Frame = 0
Query: 102 NICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVL 161
++ FN L +L A+ +L ++ SYGLVP+ +TF+ +++ Y ++GDLD A R+
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 162 GQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMV-ELVGRNGRKPTVQAYNCLLKGLCY 221
QM+ GC+ ++ ++ V+V+ FCK G+++ A + E+ ++G P +N L+ GLC
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 222 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVT 281
G V+ A E++ M ++ PD+YTY +++ GLCK+G EA+E+L + P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 282 FNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMV 341
+NTL + CKE + + + + + PD ++++L+QGL R A+ ++EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 342 SSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRS--TYGLLIQAL 401
S G +E N + +LC K L++A + ++M EL RS TY LI
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGF 487
Query: 402 CSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 443
C N+T EA M G S ++T + ++ LC S +A
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
BLAST of Carg12438 vs. TAIR 10
Match:
AT1G62680.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 193.7 bits (491), Expect = 3.4e-49
Identity = 125/467 (26.77%), Postives = 222/467 (47.54%), Query Frame = 0
Query: 25 NFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQIPTRMTIQNVADTIKSLPIPS 84
N +E +A+ S C+ S V AS G + R++ + D I
Sbjct: 16 NLLENGKPRTASSPSFSHCS---SCRCWVRASSSVSGGDLRERLSKTRLRD------IKL 75
Query: 85 EEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIM 144
+ ++F KS +I +FN L V + D+ + L + G+ + TF+I+
Sbjct: 76 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 135
Query: 145 IRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGR 204
I C+C + A +LG+ML G P+ TI LVN FC+R ++ A +V+ + G
Sbjct: 136 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 195
Query: 205 KPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 264
KP + AYN ++ LC RV +A + E+++ + P++ TYTAL++GLC R +A
Sbjct: 196 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 255
Query: 265 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLI 324
LLS+ + + P+V+T++ L + + K G+ L+ + ++M +M+ PD ++YS+L+ GL
Sbjct: 256 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 315
Query: 325 KWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQ 384
+I A + + MVS G + NT + C+ +ED ++F +M
Sbjct: 316 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-----RVEDGMKLFREMSQRGL 375
Query: 385 VIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALC 444
V + TY LIQ +A M G SP T ++++ LC +G +AL
Sbjct: 376 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 435
Query: 445 VL----GHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKP 488
+ + +++ +I + + G A +++ +G+KP
Sbjct: 436 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
BLAST of Carg12438 vs. TAIR 10
Match:
AT1G12700.1 (ATP binding;nucleic acid binding;helicases )
HSP 1 Score: 191.4 bits (485), Expect = 1.7e-48
Identity = 110/400 (27.50%), Postives = 198/400 (49.50%), Query Frame = 0
Query: 82 IPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 141
I ++ +F +S + ++ +F+ F + +L L L G+ N T
Sbjct: 67 IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 142 SIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGR 201
+IMI C+C+ A VLG+++ G P+ T L+ GK+ +A +V+ +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 202 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 261
NG +P V YN ++ G+C G A +++ +M++ ++ D++TY+ ++D LC+ G D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 262 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 321
A+ L E E G+K SVVT+N+L G CK G+ DG +LK M P+ I+++ LL
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 322 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKN 381
+K GK++ A YKEM++ G S NT M C ++ L +A+ + + M
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVR 366
Query: 382 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSG--GA 441
D T+ LI+ C R + + ++ +G A+T ++VQ C SG
Sbjct: 367 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 426
Query: 442 SEALC--VLGHGIRFSRISFDLIIEELNEEGMWFSACNVY 478
+E L ++ HG+ +++ ++++ L + G A ++
Sbjct: 427 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
BLAST of Carg12438 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 191.4 bits (485), Expect = 1.7e-48
Identity = 112/367 (30.52%), Postives = 184/367 (50.14%), Query Frame = 0
Query: 106 FNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQML 165
+N + S +LDLALK+L+ L S P T++I+I +G +D A +++ +ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 166 GSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVE 225
G P+ T ++ CK G + +AFEMV + G +P V +YN LL+ L G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 226 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLF 285
E +++T+M + P++ TY+ L+ LC+ G+ +EAM LL ++ G+ P +++ L
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 286 NGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHS 345
+C+EGR I L+ M C PD ++Y+T+L L K GK AL + ++ G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 346 IEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTS 405
NT AL W D + H + E M N + D TY +I LC
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495
Query: 406 EALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVL----GHGIRFSRISFDLII 465
EA L M + P +T ++++ C + +A+ VL G+G R + ++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555
Query: 466 EELNEEG 469
E + G
Sbjct: 556 EGIGFAG 557
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7017186.1 | 2.5e-288 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023528121.1 | 4.0e-286 | 98.98 | pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp... | [more] |
KAG6580429.1 | 2.6e-285 | 98.78 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022935128.1 | 9.9e-285 | 98.37 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata] | [more] |
XP_022982589.1 | 2.2e-276 | 96.34 | pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9FMF6 | 1.9e-49 | 31.21 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 5.6e-49 | 31.69 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q3ECK2 | 4.8e-48 | 26.77 | Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidop... | [more] |
Q9SR00 | 2.4e-47 | 30.52 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
P0C7Q7 | 2.4e-47 | 27.50 | Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F9P1 | 4.8e-285 | 98.37 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1J506 | 1.1e-276 | 96.34 | pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc... | [more] |
A0A6J1DW66 | 1.1e-215 | 76.94 | pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti... | [more] |
A0A2I4EIR4 | 8.0e-139 | 55.17 | pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Jug... | [more] |
A0A5N6RKM0 | 1.8e-138 | 59.34 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G64320.1 | 1.4e-50 | 31.21 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 4.0e-50 | 31.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62680.1 | 3.4e-49 | 26.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12700.1 | 1.7e-48 | 27.50 | ATP binding;nucleic acid binding;helicases | [more] |
AT3G04760.1 | 1.7e-48 | 30.52 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |