Carg12438 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg12438
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpentatricopeptide repeat-containing protein At1g09900-like
LocationCarg_Chr14: 68181 .. 69659 (+)
RNA-Seq ExpressionCarg12438
SyntenyCarg12438
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCTCGCCCTTCGCCCGTCTTTCCTCACCACTCTTCCGCTCTCTTCTACAGATACGCCTTTCGGTGCCAACTTTATCGAAGAAAATGGTAGGCTTAGCGCGAATAAACGACCCCATTCCGTCTGTAATGGCGGGCTTAGTTTCAATCACCATGTTCACGCCTCACCTTTCAAACTGGGGATTCAGATTCCCACTAGAATGACCATTCAAAATGTTGCCGACACAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCTTCATGTCTCAGAAAAGTTGTGAGATTCAAAACATATGTGAATTCAATGACCTGTTCATGGAATTCGTCTCAGAAGATGAGCTCGATCTTGCCCTAAAACTGTTGTCCAATTTATCATCTTACGGTTTGGTCCCAAATTGTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGATTTAGATAATGCGGCTAGGGTTTTAGGCCAAATGCTGGGAAGCGGTTGTAATCCAAACGATGCAACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAATGCAGAAAGCTTTTGAAATGGTCGAGCTCGTGGGAAGGAATGGACGCAAGCCAACCGTTCAGGCATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGATATTTACACGTACACGGCTCTTATGGATGGCTTGTGTAAGGTAGGCCGATCAGACGAGGCAATGGAATTGCTCAGTGAAGCTGAGCAAAATGGTGTTAAACCAAGTGTAGTTACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGACCACTGGATGGGATCCGTGTGTTGAAGAAAATGAAGCAAATGAACTGTACGCCGGATCGCATTAGTTATAGCACTCTGCTGCAGGGGCTGATAAAATGGGGTAAAATCCGAACAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGCCACAGCATCGAAGAAAAAATGATGAATACCTTCATGAGAGCGTTGTGCAGGAGAAGCTGGAAAGAAAAGGACCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGAACGAATTGCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACAGGACTTCTGAGGCTTTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCGATTACCATCGACGTTATGGTTCAAGCGCTTTGTCACAGCGGAGGCGCCAGTGAAGCATTGTGTGTCTTGGGGCATGGAATCCGTTTCAGCAGAATTTCCTTTGACCTGATTATCGAGGAGCTAAATGAAGAAGGAATGTGGTTTAGTGCTTGTAACGTATATGGCCTGGCTTTGAAACGAGGTATTAAACCCACGAAGAGGCCTCGGTGA

mRNA sequence

ATGCGTCTCGCCCTTCGCCCGTCTTTCCTCACCACTCTTCCGCTCTCTTCTACAGATACGCCTTTCGGTGCCAACTTTATCGAAGAAAATGGTAGGCTTAGCGCGAATAAACGACCCCATTCCGTCTGTAATGGCGGGCTTAGTTTCAATCACCATGTTCACGCCTCACCTTTCAAACTGGGGATTCAGATTCCCACTAGAATGACCATTCAAAATGTTGCCGACACAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCTTCATGTCTCAGAAAAGTTGTGAGATTCAAAACATATGTGAATTCAATGACCTGTTCATGGAATTCGTCTCAGAAGATGAGCTCGATCTTGCCCTAAAACTGTTGTCCAATTTATCATCTTACGGTTTGGTCCCAAATTGTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGATTTAGATAATGCGGCTAGGGTTTTAGGCCAAATGCTGGGAAGCGGTTGTAATCCAAACGATGCAACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAATGCAGAAAGCTTTTGAAATGGTCGAGCTCGTGGGAAGGAATGGACGCAAGCCAACCGTTCAGGCATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGATATTTACACGTACACGGCTCTTATGGATGGCTTGTGTAAGGTAGGCCGATCAGACGAGGCAATGGAATTGCTCAGTGAAGCTGAGCAAAATGGTGTTAAACCAAGTGTAGTTACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGACCACTGGATGGGATCCGTGTGTTGAAGAAAATGAAGCAAATGAACTGTACGCCGGATCGCATTAGTTATAGCACTCTGCTGCAGGGGCTGATAAAATGGGGTAAAATCCGAACAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGCCACAGCATCGAAGAAAAAATGATGAATACCTTCATGAGAGCGTTGTGCAGGAGAAGCTGGAAAGAAAAGGACCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGAACGAATTGCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACAGGACTTCTGAGGCTTTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCGATTACCATCGACGTTATGGTTCAAGCGCTTTGTCACAGCGGAGGCGCCAGTGAAGCATTGTGTGTCTTGGGGCATGGAATCCGTTTCAGCAGAATTTCCTTTGACCTGATTATCGAGGAGCTAAATGAAGAAGGAATGTGGTTTAGTGCTTGTAACGTATATGGCCTGGCTTTGAAACGAGGTATTAAACCCACGAAGAGGCCTCGGTGA

Coding sequence (CDS)

ATGCGTCTCGCCCTTCGCCCGTCTTTCCTCACCACTCTTCCGCTCTCTTCTACAGATACGCCTTTCGGTGCCAACTTTATCGAAGAAAATGGTAGGCTTAGCGCGAATAAACGACCCCATTCCGTCTGTAATGGCGGGCTTAGTTTCAATCACCATGTTCACGCCTCACCTTTCAAACTGGGGATTCAGATTCCCACTAGAATGACCATTCAAAATGTTGCCGACACAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCTTCATGTCTCAGAAAAGTTGTGAGATTCAAAACATATGTGAATTCAATGACCTGTTCATGGAATTCGTCTCAGAAGATGAGCTCGATCTTGCCCTAAAACTGTTGTCCAATTTATCATCTTACGGTTTGGTCCCAAATTGTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGATTTAGATAATGCGGCTAGGGTTTTAGGCCAAATGCTGGGAAGCGGTTGTAATCCAAACGATGCAACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAATGCAGAAAGCTTTTGAAATGGTCGAGCTCGTGGGAAGGAATGGACGCAAGCCAACCGTTCAGGCATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGATATTTACACGTACACGGCTCTTATGGATGGCTTGTGTAAGGTAGGCCGATCAGACGAGGCAATGGAATTGCTCAGTGAAGCTGAGCAAAATGGTGTTAAACCAAGTGTAGTTACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGACCACTGGATGGGATCCGTGTGTTGAAGAAAATGAAGCAAATGAACTGTACGCCGGATCGCATTAGTTATAGCACTCTGCTGCAGGGGCTGATAAAATGGGGTAAAATCCGAACAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGCCACAGCATCGAAGAAAAAATGATGAATACCTTCATGAGAGCGTTGTGCAGGAGAAGCTGGAAAGAAAAGGACCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGAACGAATTGCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACAGGACTTCTGAGGCTTTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCGATTACCATCGACGTTATGGTTCAAGCGCTTTGTCACAGCGGAGGCGCCAGTGAAGCATTGTGTGTCTTGGGGCATGGAATCCGTTTCAGCAGAATTTCCTTTGACCTGATTATCGAGGAGCTAAATGAAGAAGGAATGTGGTTTAGTGCTTGTAACGTATATGGCCTGGCTTTGAAACGAGGTATTAAACCCACGAAGAGGCCTCGGTGA

Protein sequence

MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKPTKRPR
Homology
BLAST of Carg12438 vs. NCBI nr
Match: KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1001.5 bits (2588), Expect = 2.5e-288
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. NCBI nr
Match: XP_023528121.1 (pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 994.2 bits (2569), Expect = 4.0e-286
Identity = 487/492 (98.98%), Postives = 489/492 (99.39%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           L LKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV
Sbjct: 121 LGLKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTA+MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTAVMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           RSWKEKDLLEDAHQVFEKMKNELQV+DRSTYGLLIQALCSGNRT EALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVVDRSTYGLLIQALCSGNRTCEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 991.5 bits (2562), Expect = 2.6e-285
Identity = 486/492 (98.78%), Postives = 489/492 (99.39%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MR+ALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL+NAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           R+WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 989.6 bits (2557), Expect = 9.9e-285
Identity = 484/492 (98.37%), Postives = 488/492 (99.19%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MR+ALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVH SPFKL
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL+NAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           R+WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDL+IEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. NCBI nr
Match: XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 961.8 bits (2485), Expect = 2.2e-276
Identity = 474/492 (96.34%), Postives = 477/492 (96.95%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MRLALRPSFLTTLPLSSTDTPFGANFIE N R SANKRPHSVCNGG SFNHHVHASPFKL
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVAD IKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           LALKLLSNL+SYGLVPN RTFSIMIRCYCKKGDLDNAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTALMDGLCKVGRSDEAMELLSEAE NGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLL GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           R+WKEKDLLEDAHQVFEKMKNE QVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           P AITIDVMVQALCHSG ASEALCVLGHGIRFSRISFDLIIEELNEEGMW SAC+VYGLA
Sbjct: 421 PWAITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-49
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 0

Query: 106 FNDLFMEFVSEDELDLALKLLSNL-SSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQM 165
           FN L   FV+   LD A  +LS++ +SYG+VP+  T++ +I  Y K+G +  A  VL  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 166 LGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRV 225
              GC PN  + T+LV+ FCK GK+ +A+ ++  +  +G KP    +NCL+   C   R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 226 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTL 285
            EA E+  EM +    PD+YT+ +L+ GLC+V     A+ LL +    GV  + VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 286 FNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGH 345
            N + + G   +  +++ +M       D I+Y++L++GL + G++  A   +++M+  GH
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595

Query: 346 SIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRT 405
           +      N  +  LCR       ++E+A +  ++M       D  T+  LI  LC   R 
Sbjct: 596 APSNISCNILINGLCR-----SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 655

Query: 406 SEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGI 451
            + L     +  +G  P  +T + ++  LC  G   +A  +L  GI
Sbjct: 656 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696

BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.6e-49
Identity = 109/344 (31.69%), Postives = 186/344 (54.07%), Query Frame = 0

Query: 102 NICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVL 161
           ++  FN L        +L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++GDLD A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 162 GQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMV-ELVGRNGRKPTVQAYNCLLKGLCY 221
            QM+  GC+ ++ ++ V+V+ FCK G+++ A   + E+  ++G  P    +N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 222 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVT 281
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L +       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 282 FNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMV 341
           +NTL +  CKE +  +   + + +      PD  ++++L+QGL      R A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 342 SSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRS--TYGLLIQAL 401
           S G   +E   N  + +LC      K  L++A  + ++M  EL    RS  TY  LI   
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGF 487

Query: 402 CSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 443
           C  N+T EA      M   G S  ++T + ++  LC S    +A
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match: Q3ECK2 (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62680 PE=2 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-48
Identity = 125/467 (26.77%), Postives = 222/467 (47.54%), Query Frame = 0

Query: 25  NFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQIPTRMTIQNVADTIKSLPIPS 84
           N +E     +A+    S C+   S    V AS    G  +  R++   + D      I  
Sbjct: 16  NLLENGKPRTASSPSFSHCS---SCRCWVRASSSVSGGDLRERLSKTRLRD------IKL 75

Query: 85  EEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIM 144
            +  ++F    KS    +I +FN L    V   + D+ + L   +   G+  +  TF+I+
Sbjct: 76  NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 135

Query: 145 IRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGR 204
           I C+C    +  A  +LG+ML  G  P+  TI  LVN FC+R ++  A  +V+ +   G 
Sbjct: 136 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 195

Query: 205 KPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 264
           KP + AYN ++  LC   RV +A +   E+++  + P++ TYTAL++GLC   R  +A  
Sbjct: 196 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 255

Query: 265 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLI 324
           LLS+  +  + P+V+T++ L + + K G+ L+   + ++M +M+  PD ++YS+L+ GL 
Sbjct: 256 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 315

Query: 325 KWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQ 384
              +I  A + +  MVS G   +    NT +   C+        +ED  ++F +M     
Sbjct: 316 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-----RVEDGMKLFREMSQRGL 375

Query: 385 VIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALC 444
           V +  TY  LIQ         +A      M   G SP   T ++++  LC +G   +AL 
Sbjct: 376 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 435

Query: 445 VL----GHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKP 488
           +        +    +++  +I  + + G    A +++     +G+KP
Sbjct: 436 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.4e-47
Identity = 112/367 (30.52%), Postives = 184/367 (50.14%), Query Frame = 0

Query: 106 FNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQML 165
           +N +     S  +LDLALK+L+ L S    P   T++I+I     +G +D A +++ +ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 166 GSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVE 225
             G  P+  T   ++   CK G + +AFEMV  +   G +P V +YN LL+ L   G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 226 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLF 285
           E  +++T+M  +   P++ TY+ L+  LC+ G+ +EAM LL   ++ G+ P   +++ L 
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 286 NGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHS 345
             +C+EGR    I  L+ M    C PD ++Y+T+L  L K GK   AL  + ++   G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 346 IEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTS 405
                 NT   AL    W   D +   H + E M N +   D  TY  +I  LC      
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495

Query: 406 EALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVL----GHGIRFSRISFDLII 465
           EA   L  M    + P  +T ++++   C +    +A+ VL    G+G R +  ++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555

Query: 466 EELNEEG 469
           E +   G
Sbjct: 556 EGIGFAG 557

BLAST of Carg12438 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.4e-47
Identity = 110/400 (27.50%), Postives = 198/400 (49.50%), Query Frame = 0

Query: 82  IPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 141
           I  ++   +F    +S  + ++ +F+  F       + +L L     L   G+  N  T 
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 142 SIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGR 201
           +IMI C+C+      A  VLG+++  G  P+  T   L+      GK+ +A  +V+ +  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 202 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 261
           NG +P V  YN ++ G+C  G    A +++ +M++ ++  D++TY+ ++D LC+ G  D 
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 262 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 321
           A+ L  E E  G+K SVVT+N+L  G CK G+  DG  +LK M      P+ I+++ LL 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 322 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKN 381
             +K GK++ A   YKEM++ G S      NT M   C      ++ L +A+ + + M  
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVR 366

Query: 382 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSG--GA 441
                D  T+  LI+  C   R  + +    ++  +G    A+T  ++VQ  C SG    
Sbjct: 367 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 426

Query: 442 SEALC--VLGHGIRFSRISFDLIIEELNEEGMWFSACNVY 478
           +E L   ++ HG+    +++ ++++ L + G    A  ++
Sbjct: 427 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

BLAST of Carg12438 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 989.6 bits (2557), Expect = 4.8e-285
Identity = 484/492 (98.37%), Postives = 488/492 (99.19%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MR+ALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVH SPFKL
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVADTIKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDL+NAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           R+WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDL+IEELNEEGMWFSACNVYGLA
Sbjct: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 474/492 (96.34%), Postives = 477/492 (96.95%), Query Frame = 0

Query: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
           MRLALRPSFLTTLPLSSTDTPFGANFIE N R SANKRPHSVCNGG SFNHHVHASPFKL
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
           GIQIPTRMTIQNVAD IKSLPIPSEEGTEIF MSQKSCEIQNICEFNDLFMEFVSEDELD
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
           LALKLLSNL+SYGLVPN RTFSIMIRCYCKKGDLDNAARVLGQMLG GCNPNDATITVLV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
           NAFCKRGKMQKA EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
           PDIYTYTALMDGLCKVGRSDEAMELLSEAE NGVKPSVVTFNTLFNGYCKEGRPLDGIRV
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
           LKKMKQMNCTPDRISYSTLL GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
           R+WKEKDLLEDAHQVFEKMKNE QVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 421 PRAITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLA 480
           P AITIDVMVQALCHSG ASEALCVLGHGIRFSRISFDLIIEELNEEGMW SAC+VYGLA
Sbjct: 421 PWAITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSVYGLA 480

Query: 481 LKRGIKPTKRPR 493
           LKRGIKPTKRPR
Sbjct: 481 LKRGIKPTKRPR 492

BLAST of Carg12438 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 1.1e-215
Identity = 377/490 (76.94%), Postives = 420/490 (85.71%), Query Frame = 0

Query: 13  LPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSF-NHHVHASPFKLGIQIPTRMTIQ 72
           LPLSST      NFIEENGRLS NK+ HS  N G  F   +V+A PFKL I+ P R+T++
Sbjct: 9   LPLSST----SVNFIEENGRLSPNKQSHSNRNRGPGFGGDNVYALPFKLEIENPRRITVK 68

Query: 73  NVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSS 132
           N A  I SLP PS+EGTE+F  SQK CEIQNI EFNDLF +FVS +ELDLAL+LLSN+SS
Sbjct: 69  NEAGRIGSLPTPSKEGTEMFITSQKDCEIQNISEFNDLFADFVSAEELDLALRLLSNISS 128

Query: 133 YGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQK 192
           YGLVPN RTFSI IRCYCKKGDLDNA RV  QMLGSGCNPNDAT+TVLVNA C+RGK+++
Sbjct: 129 YGLVPNSRTFSIAIRCYCKKGDLDNAKRVFDQMLGSGCNPNDATVTVLVNALCRRGKIKR 188

Query: 193 AFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMD 252
           A EMVELVGR GRK TV+ YNCLLKGLCYVGRVEEACEMV +MKKD L+PDIYTYTALMD
Sbjct: 189 ALEMVELVGRIGRKQTVRTYNCLLKGLCYVGRVEEACEMVAKMKKDGLVPDIYTYTALMD 248

Query: 253 GLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTP 312
           GLCKVGRSDEAMELL+EAE+NG++PSVVTFNTLFNGYCKEGRPLDGI VLKKMKQMNC P
Sbjct: 249 GLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNCMP 308

Query: 313 DRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLED 372
           DRISY+TLL GLIKWGKIRTALRTYKEMVSSGHS+EEKMMNTFMRALCRRSWKEKDLLED
Sbjct: 309 DRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLLED 368

Query: 373 AHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQ 432
           AHQVFEKMKNE QVI RSTYG++I ALCSGN+ SEA+ANLHHMI KGYSPRAITI+V+V+
Sbjct: 369 AHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVVVE 428

Query: 433 ALCHSGGASEALCVLG---------HGIRFSRISFDLIIEELNEEGMWFSACNVYGLALK 492
           ALC  G  +EAL V+G         H I FSR+S+DLII+ELN++GMWF AC VYGLALK
Sbjct: 429 ALCRRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYGLALK 488

BLAST of Carg12438 vs. ExPASy TrEMBL
Match: A0A2I4EIR4 (pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108989956 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 8.0e-139
Identity = 272/493 (55.17%), Postives = 342/493 (69.37%), Query Frame = 0

Query: 10  LTTLPLSS---TDTP--FGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQI 69
           L  L LSS   T+ P     + + ++ R    K  H +    ++ NH V   P     Q+
Sbjct: 46  LAALSLSSSNPTERPRLHTIHLLHDHYRFLPRKHSHLIY---VNRNHLV--DPRTSSFQV 105

Query: 70  PTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALK 129
           P      +   TI SL  P+EE TE      K  E + I  FNDL M  +  +E DLALK
Sbjct: 106 P------DFVGTIGSL--PTEERTEFLTAYIKDTEFRTISNFNDLLMALLIAEEPDLALK 165

Query: 130 LLSNLSSYGLV-PNCRTFSIMIRCYCKKGDLDNAARVLGQMLGS-GCNPNDATITVLVNA 189
           L S+LSSY  + P+  TFSI+ RCYCKK  LD A RVL  M+   G +P+ ATIT+L+N 
Sbjct: 166 LFSDLSSYASIEPDSWTFSIVSRCYCKKNHLDEAQRVLDHMVEERGFHPDVATITMLING 225

Query: 190 FCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPD 249
           FCKRGK+Q+AFE++  +GR G +PTV+ YNCLLKG+CYVGRVEEA EM+ ++ K+S+ PD
Sbjct: 226 FCKRGKLQRAFELLHFMGRIGCEPTVRTYNCLLKGMCYVGRVEEAFEMLIKI-KESMKPD 285

Query: 250 IYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLK 309
           IYTYTA+MDG CKVGRSDEAMELL EAE+ G+ P+VV++NTLF GYCKEGRPL+GI VLK
Sbjct: 286 IYTYTAVMDGFCKVGRSDEAMELLDEAEEMGLTPNVVSYNTLFQGYCKEGRPLEGIGVLK 345

Query: 310 KMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRS 369
           +MKQ NC PD I YSTLL GL+KWGKIR+ALRTYKEMV  G  ++E+MMNTF+R LCRRS
Sbjct: 346 QMKQRNCMPDYICYSTLLHGLLKWGKIRSALRTYKEMVGDGFEVDERMMNTFLRRLCRRS 405

Query: 370 WKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPR 429
           WKEKD+LEDA+QVFEKMK    VID STY L+IQALC+G +  +AL NLH MI  G+SP 
Sbjct: 406 WKEKDMLEDAYQVFEKMKKRFYVIDLSTYSLMIQALCTGKKIEQALDNLHDMIRMGHSPP 465

Query: 430 AITIDVMVQALCHSGGASEALCVLG---HGIRF-SRISFDLIIEELNEEGMWFSACNVYG 489
            IT + +++ALC  G   EAL VL     G R  +RIS++L+IEELN       ACN+YG
Sbjct: 466 IITFNSIIRALCAGGRVDEALLVLALMDEGRRMPNRISYNLLIEELNRRKWLLGACNIYG 524

Query: 490 LALKRGIKPTKRP 492
           +ALKRG+ P ++P
Sbjct: 526 MALKRGVIPNRKP 524

BLAST of Carg12438 vs. ExPASy TrEMBL
Match: A0A5N6RKM0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.8e-138
Identity = 251/423 (59.34%), Postives = 314/423 (74.23%), Query Frame = 0

Query: 75  DTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGL 134
           DTI+ L  P++  TE      K  E + + +FNDL M     +E DLAL+L S++SSYG 
Sbjct: 43  DTIRGL--PTKGRTEFLSTFFKDREFRTVSDFNDLVMALFIAEEPDLALELFSDMSSYGF 102

Query: 135 VPNCRTFSIMIRCYCKKGDLDNAARVLGQML-GSGCNPNDATITVLVNAFCKRGKMQKAF 194
            P+  T SI+ RCYCKK  LD A RVL QM+   G +P+ AT+T+L+N FCKRG++Q+AF
Sbjct: 103 EPDSWTLSIVSRCYCKKNHLDEAKRVLDQMVEEKGFHPDVATVTILINGFCKRGRLQRAF 162

Query: 195 EMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGL 254
           E+ + +GR G KPTVQ YNCLLKGLC+VGRVEEA EM+ ++KKDS+ PDIYTYTA+MDG 
Sbjct: 163 EVFDFMGRIGCKPTVQTYNCLLKGLCFVGRVEEAFEMLIKIKKDSVKPDIYTYTAVMDGF 222

Query: 255 CKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDR 314
           CKVGRSDEA+ELL EA + G+ P+VVT+NTLFNGYCKEGRPL GI VLK+MKQ NC PD 
Sbjct: 223 CKVGRSDEAVELLDEAVEMGLTPNVVTYNTLFNGYCKEGRPLKGIGVLKQMKQRNCMPDY 282

Query: 315 ISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAH 374
           I+YSTLL GL+KWGKIR+ALRTYKEMV  G   +E+MMNT +R LC+RSWKEKDLLE+A+
Sbjct: 283 ITYSTLLHGLLKWGKIRSALRTYKEMVGDGFEADERMMNTLLRGLCKRSWKEKDLLENAY 342

Query: 375 QVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQAL 434
           Q+FEKMKN   VID STYGL+++ALC G +T EAL NLH     G+SP  IT + +++AL
Sbjct: 343 QLFEKMKNGFYVIDLSTYGLMVKALCVGEKTEEALDNLHDFTRMGHSPHIITFNSVIRAL 402

Query: 435 CHSGGASEALCVL---GHGIRF-SRISFDLIIEELNEEGMWFSACNVYGLALKRGIKPTK 493
           C  G   EAL VL     G R  +RIS++L+IEE N       ACN+YG ALKRG+ P +
Sbjct: 403 CAEGRVDEALLVLILMDEGRRIPNRISYNLLIEECNRRKWLLGACNIYGAALKRGVIPDR 462

BLAST of Carg12438 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-50
Identity = 108/346 (31.21%), Postives = 181/346 (52.31%), Query Frame = 0

Query: 106 FNDLFMEFVSEDELDLALKLLSNL-SSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQM 165
           FN L   FV+   LD A  +LS++ +SYG+VP+  T++ +I  Y K+G +  A  VL  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 166 LGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRV 225
              GC PN  + T+LV+ FCK GK+ +A+ ++  +  +G KP    +NCL+   C   R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 226 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTL 285
            EA E+  EM +    PD+YT+ +L+ GLC+V     A+ LL +    GV  + VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 286 FNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGH 345
            N + + G   +  +++ +M       D I+Y++L++GL + G++  A   +++M+  GH
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595

Query: 346 SIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRT 405
           +      N  +  LCR       ++E+A +  ++M       D  T+  LI  LC   R 
Sbjct: 596 APSNISCNILINGLCR-----SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 655

Query: 406 SEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVLGHGI 451
            + L     +  +G  P  +T + ++  LC  G   +A  +L  GI
Sbjct: 656 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696

BLAST of Carg12438 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 4.0e-50
Identity = 109/344 (31.69%), Postives = 186/344 (54.07%), Query Frame = 0

Query: 102 NICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVL 161
           ++  FN L        +L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++GDLD A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 162 GQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMV-ELVGRNGRKPTVQAYNCLLKGLCY 221
            QM+  GC+ ++ ++ V+V+ FCK G+++ A   + E+  ++G  P    +N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 222 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVT 281
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L +       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 282 FNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMV 341
           +NTL +  CKE +  +   + + +      PD  ++++L+QGL      R A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 342 SSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRS--TYGLLIQAL 401
           S G   +E   N  + +LC      K  L++A  + ++M  EL    RS  TY  LI   
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGF 487

Query: 402 CSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEA 443
           C  N+T EA      M   G S  ++T + ++  LC S    +A
Sbjct: 488 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

BLAST of Carg12438 vs. TAIR 10
Match: AT1G62680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 3.4e-49
Identity = 125/467 (26.77%), Postives = 222/467 (47.54%), Query Frame = 0

Query: 25  NFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKLGIQIPTRMTIQNVADTIKSLPIPS 84
           N +E     +A+    S C+   S    V AS    G  +  R++   + D      I  
Sbjct: 16  NLLENGKPRTASSPSFSHCS---SCRCWVRASSSVSGGDLRERLSKTRLRD------IKL 75

Query: 85  EEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIM 144
            +  ++F    KS    +I +FN L    V   + D+ + L   +   G+  +  TF+I+
Sbjct: 76  NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 135

Query: 145 IRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGR 204
           I C+C    +  A  +LG+ML  G  P+  TI  LVN FC+R ++  A  +V+ +   G 
Sbjct: 136 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 195

Query: 205 KPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 264
           KP + AYN ++  LC   RV +A +   E+++  + P++ TYTAL++GLC   R  +A  
Sbjct: 196 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 255

Query: 265 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLI 324
           LLS+  +  + P+V+T++ L + + K G+ L+   + ++M +M+  PD ++YS+L+ GL 
Sbjct: 256 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 315

Query: 325 KWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQ 384
              +I  A + +  MVS G   +    NT +   C+        +ED  ++F +M     
Sbjct: 316 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK-----RVEDGMKLFREMSQRGL 375

Query: 385 VIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALC 444
           V +  TY  LIQ         +A      M   G SP   T ++++  LC +G   +AL 
Sbjct: 376 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 435

Query: 445 VL----GHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKP 488
           +        +    +++  +I  + + G    A +++     +G+KP
Sbjct: 436 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

BLAST of Carg12438 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-48
Identity = 110/400 (27.50%), Postives = 198/400 (49.50%), Query Frame = 0

Query: 82  IPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTF 141
           I  ++   +F    +S  + ++ +F+  F       + +L L     L   G+  N  T 
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 142 SIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGR 201
           +IMI C+C+      A  VLG+++  G  P+  T   L+      GK+ +A  +V+ +  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 202 NGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDE 261
           NG +P V  YN ++ G+C  G    A +++ +M++ ++  D++TY+ ++D LC+ G  D 
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 262 AMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQ 321
           A+ L  E E  G+K SVVT+N+L  G CK G+  DG  +LK M      P+ I+++ LL 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 322 GLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKN 381
             +K GK++ A   YKEM++ G S      NT M   C      ++ L +A+ + + M  
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVR 366

Query: 382 ELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVMVQALCHSG--GA 441
                D  T+  LI+  C   R  + +    ++  +G    A+T  ++VQ  C SG    
Sbjct: 367 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 426

Query: 442 SEALC--VLGHGIRFSRISFDLIIEELNEEGMWFSACNVY 478
           +E L   ++ HG+    +++ ++++ L + G    A  ++
Sbjct: 427 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

BLAST of Carg12438 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-48
Identity = 112/367 (30.52%), Postives = 184/367 (50.14%), Query Frame = 0

Query: 106 FNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQML 165
           +N +     S  +LDLALK+L+ L S    P   T++I+I     +G +D A +++ +ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 166 GSGCNPNDATITVLVNAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVE 225
             G  P+  T   ++   CK G + +AFEMV  +   G +P V +YN LL+ L   G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 226 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLF 285
           E  +++T+M  +   P++ TY+ L+  LC+ G+ +EAM LL   ++ G+ P   +++ L 
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 286 NGYCKEGRPLDGIRVLKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHS 345
             +C+EGR    I  L+ M    C PD ++Y+T+L  L K GK   AL  + ++   G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 346 IEEKMMNTFMRALCRRSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTS 405
                 NT   AL    W   D +   H + E M N +   D  TY  +I  LC      
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495

Query: 406 EALANLHHMIGKGYSPRAITIDVMVQALCHSGGASEALCVL----GHGIRFSRISFDLII 465
           EA   L  M    + P  +T ++++   C +    +A+ VL    G+G R +  ++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555

Query: 466 EELNEEG 469
           E +   G
Sbjct: 556 EGIGFAG 557

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7017186.12.5e-288100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023528121.14.0e-28698.98pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp... [more]
KAG6580429.12.6e-28598.78Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022935128.19.9e-28598.37pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata][more]
XP_022982589.12.2e-27696.34pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucur... [more]
Match NameE-valueIdentityDescription
Q9FMF61.9e-4931.21Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q9LFF15.6e-4931.69Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q3ECK24.8e-4826.77Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidop... [more]
Q9SR002.4e-4730.52Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
P0C7Q72.4e-4727.50Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Match NameE-valueIdentityDescription
A0A6J1F9P14.8e-28598.37pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... [more]
A0A6J1J5061.1e-27696.34pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc... [more]
A0A6J1DW661.1e-21576.94pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti... [more]
A0A2I4EIR48.0e-13955.17pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Jug... [more]
A0A5N6RKM01.8e-13859.34Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G64320.11.4e-5031.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.14.0e-5031.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62680.13.4e-4926.77Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12700.11.7e-4827.50ATP binding;nucleic acid binding;helicases [more]
AT3G04760.11.7e-4830.52Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 276..325
e-value: 1.5E-14
score: 53.9
coord: 206..255
e-value: 1.6E-16
score: 60.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 389..418
e-value: 0.38
score: 11.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 314..345
e-value: 9.8E-7
score: 26.6
coord: 244..278
e-value: 8.9E-9
score: 33.0
coord: 279..312
e-value: 1.7E-9
score: 35.2
coord: 140..172
e-value: 2.3E-9
score: 34.9
coord: 175..207
e-value: 2.5E-4
score: 19.0
coord: 210..243
e-value: 5.3E-8
score: 30.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 133..164
e-value: 7.4E-11
score: 41.6
coord: 168..197
e-value: 3.2E-6
score: 26.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 10.303679
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 10.457138
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 12.572669
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 10.05157
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 13.657837
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 12.682281
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 271..366
e-value: 2.1E-24
score: 87.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 201..270
e-value: 3.4E-22
score: 80.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 367..490
e-value: 4.9E-14
score: 54.4
coord: 82..200
e-value: 4.9E-22
score: 80.7
NoneNo IPR availablePANTHERPTHR47942:SF36PPR CONTAINING PLANT-LIKE PROTEINcoord: 64..491
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 64..491
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 139..307

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12438-RACarg12438-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding