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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGAAGGAACTCGTCAATCATCCCCTAAAACCTTTTGTGTCTAGCAAACTGAAAGCCATGTACCTTAAAAAAGAGACTACAAACAGTCCCAGCAAAGCTGCAAGTGCAAAGAATGTGATCAAGGTCTTCCTCTACCCTCCGACAAAGAATGCAACAACACGGCTCAATCAGAGTAAACATCTTCCTCGAAAACTTGTCTAAAGTATTAACTCTTTTATGGATAACTTTATTTGAACTTTTACCTTCCATAGAGACAAAATAGTTTCAATCTTGATAAGCGTATGAAGAACTTCCAGAAACGGATCATCACAAGGGCAGAACCATAATGAGGCAAAGAATGTGCTCAGTATCTTCCTAATGTAAATTGAACCACAAGGCTCCAATTGCCTCAATTTCGATTTCCACTTAACAATGCTAATTGATTGAAGAATCAAAAGTTCTTAACAATGCCTATAACACAAATTGTAATGTACAGAAGCTCACCAGAATGCTCGAGTTTCAAACTCGGCAACGTCAGTGTCTCACGCATGAAACTTGGAAACA mRNA sequence ATGGAGAAGGAACTCGTCAATCATCCCCTAAAACCTTTTGTGTCTAGCAAACTGAAAGCCATGTACCTTAAAAAAGAGACTACAAACAGTCCCAGCAAAGCTGCAAGTGCAAAGAATGTGATCAAGGTCTTCCTCTACCCTCCGACAAAGAATGCAACAACACGGCTCAATCAGAAAGCTCACCAGAATGCTCGAGTTTCAAACTCGGCAACGTCAGTGTCTCACGCATGAAACTTGGAAACA Coding sequence (CDS) ATGGAGAAGGAACTCGTCAATCATCCCCTAAAACCTTTTGTGTCTAGCAAACTGAAAGCCATGTACCTTAAAAAAGAGACTACAAACAGTCCCAGCAAAGCTGCAAGTGCAAAGAATGTGATCAAGGTCTTCCTCTACCCTCCGACAAAGAATGCAACAACACGGCTCAATCAGAAAGCTCACCAGAATGCTCGAGTTTCAAACTCGGCAACGTCAGTGTCTCACGCATGA Protein sequence MEKELVNHPLKPFVSSKLKAMYLKKETTNSPSKAASAKNVIKVFLYPPTKNATTRLNQKAHQNARVSNSATSVSHA
Homology
BLAST of Carg11107 vs. NCBI nr
Match: KAG7026029.1 (hypothetical protein SDJN02_12527, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 Query: 1 MEKELVNHPLKPFVSSKLKAMYLKKETTNSPSKAASAKNVIKVFLYPPTKNATTRLNQKA 60 MEKELVNHPLKPFVSSKLKAMYLKKETTNSPSKAASAKNVIKVFLYPPTKNATTRLNQKA Sbjct: 1 MEKELVNHPLKPFVSSKLKAMYLKKETTNSPSKAASAKNVIKVFLYPPTKNATTRLNQKA 60
Query: 61 HQNARVSNSATSVSHA 77 HQNARVSNSATSVSHA Sbjct: 61 HQNARVSNSATSVSHA 76
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7026029.1 | 2.3e-31 | 100.00 | hypothetical protein SDJN02_12527, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 56..76 |
Relationships
The following mRNA feature(s) are a part of this gene:
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