Carg10829 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10829
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Profilin
Location	Carg_Chr05: 11896092 .. 11898875 (-)
RNA-Seq Expression	Carg10829
Synteny	Carg10829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAACGCTATCTCGGGCGAAACCGCGCTGTAAGAAGAGCAGAGAGGATTATTTGGTGGAGCTCATTTCGTCAGTGGACATAAATTGAATCTTCTCTCGATCGATTTAGCGCAGAAAAGAGTGAAGGAGAAAAAACCCTAAACTGATTGAACCAGAAGCAGGAGGAGGAAGAACAAGCGGGGAAAGATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGGTTTACGCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTAATCTTTTACAGAAAATATGAAATCCGAGTATTGATTTGATTGACTGCTTGTTATCGATGGCTGGATCTGTCTGGATTTTTAATCCAAGATCTCGTGGTTCAGAGCATGATGAATATGATGGATTTTTTTTTTTAATCGTGGCTGATTTGATCTGATTGTTGTATGTCGATGCATGGCTTCGGGAGTCTCAAGGTTTAAATCGGTTGGTCGATGTAATTCTATGCAGTTTCGTTAGATGTGATTGAAATTAGAATCTGTTGTTGTTTCCATTTTGTTTAGATGTAGCGATTGTACGAGGCAGTAAAGATCTGGAGTTTTCTATTACCGTCATCTAGGGTTCTAGATTTACTTCGGAGCATTTCGATTTTATTCTCAATTATTTCTGTATTAGTTACGAAATGGTCAAGATGCTGTGCTGATTTCTCTTTAGACCGTCTTGATGATCGATTTCATATTGTGTATTTGATGGAATTCTTAGAAGAAGTCAAGGATGTTTGTCCTAACTTTCCTGGTTTCCTGTCCACTTTATGAGGTCCTCAATGCATGTTCCTACTTTTGTGGTTTGCAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGTAATAAAAAATTCAATGAAAATGTTCTATAATTAATTCTGAGTTCTGACTTTGAGAGATGATGGGCATGCAAGCAATTTATTCTGAAAGTGTTCTAAACTTAACTTTATAAGTTGCAATGAATATGAGAACCTTCATCCTAGATTAGTTTTCTAATTGGTCAGTGTTAAAAGTTTCTAAATTCATTATGTATTGGATTCTGCAGCAAAATTTGTTATCATGTTTACACTGCTTGGTGTATTTACCTTTGATCTGGCAATTAGATTCTCCTTTCCATTGAATTTTAAACCAATATATCTCTTGATTTTAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAAATATCGGTATGCTTGCTTGCTACCTTTGTATGCGATCGATCCTATTTCTTTTCAGCATCCATATTTCTCTTATTGCTGATACAATCTTTTGGATTGTTAATTGCTGCAGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGATTGATGCTTGAGGAGTGATGCTTATGTTTCTCGTTTTTAGTGTTGTCTCTTTCACTTTTTTGTTTGAAATATTGTGGTGGTTTTCAAGTGAGGTCCATTGTAGTAGCATCAAATATGGATATGGTAAACCATTCAGCATAAATTTATAAATACTCTTTTATTTTATCTGTTGATTTTTGCAGCAGGCTCCTGTATAACACGAGGAGATATAATTTCTCTCAAACCCAAATGTGGGCTGGTGGGACATTTCACTCCAGATAAATTTCTTTCCTTTTCTTCCCAATTACTTCTGCAGTTCTTGGTTTGGTTGCTTTTCAGTCTCTGGCAGATTATGCTAAATAGTTGGTATGTTGTTTCATTAATGGTTCGGGATAATTGCTGGCTTGCTGCCAGCCATGGTGACTCCATTAATCTTTACCTACGGCCTGTTGGTAGAGGGTAGGGTGGTTAGCAAACTATACCAGATGGTTGAGAATAGCAAATATTTCCATAGATTTACTCAATATTCACCATCACAAACCCACCACGGCCACAGGTAGTGGTAGGTAGCTACCGACCAAGAACTGTGGAGGTTTTAACTGTTCACATCAACCAGGCAAGTGGTGCTTTTGTGGATGGACTAATGGCATTCTTAGGTCTAAAAGTGGTGCCGAAGAATGAATGATTTTTCTTTGTTCAATGAAGGACTTTTAGGAAGGGGGATTGATTTTATAGTTAGAGCATGGAAGGATGATTTTCAATAGGACTAAGAATCTCTGAAGCAATATTTTGTGGTGGGGTTGGTGTTGCATTACTTCACATTGCCTAGAGATGATCATTTGTTATAAGGTCCAAACAGATTGCTATGGCTACTTTTGGACTCTGGAGCCCATGGATATCGAGGTTCTACAAGCGGTAATTCCTGATACTATGGTAAAAGGGGTAGTTTGAATGTGGGAGTTGTTCTTATTTTACTCAAAGGATTTGAAATAGTCCCCAATCTGTCTTTTTCAAGAACATTTCTTCCTAGGCCTCGGACTTCAAATTGTAAGGTGTTTCCAGGTGTTTCCATTGCATAAGAAAAAACTCAATTGGATCTAGAGATACTAAGCTAAAATTAATTTGAGAAATGTTTTATC

mRNA sequence

CATCAACGCTATCTCGGGCGAAACCGCGCTGTAAGAAGAGCAGAGAGGATTATTTGGTGGAGCTCATTTCGTCAGTGGACATAAATTGAATCTTCTCTCGATCGATTTAGCGCAGAAAAGAGTGAAGGAGAAAAAACCCTAAACTGATTGAACCAGAAGCAGGAGGAGGAAGAACAAGCGGGGAAAGATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGATTGATGCTTGAGGAGTGATGCTTATGTTTCTCGTTTTTAGTGTTGTCTCTTTCACTTTTTTGTTTGAAATATTGTGGTGGTTTTCAAGTGAGGTCCATTGTAGTAGCATCAAATATGGATATGGTAAACCATTCAGCATAAATTTATAAATACTCTTTTATTTTATCTGTTGATTTTTGCAGCAGGCTCCTGTATAACACGAGGAGATATAATTTCTCTCAAACCCAAATGTGGGCTGGTGGGACATTTCACTCCAGATAAATTTCTTTCCTTTTCTTCCCAATTACTTCTGCAGTTCTTGGTTTGGTTGCTTTTCAGTCTCTGGCAGATTATGCTAAATAGTTGGTATGTTGTTTCATTAATGGTTCGGGATAATTGCTGGCTTGCTGCCAGCCATGGTGACTCCATTAATCTTTACCTACGGCCTGTTGGTAGAGGGTAGGGTGGTTAGCAAACTATACCAGATGGTTGAGAATAGCAAATATTTCCATAGATTTACTCAATATTCACCATCACAAACCCACCACGGCCACAGGTAGTGGTAGGTAGCTACCGACCAAGAACTGTGGAGGTTTTAACTGTTCACATCAACCAGGCAAGTGGTGCTTTTGTGGATGGACTAATGGCATTCTTAGGTCTAAAAGTGGTGCCGAAGAATGAATGATTTTTCTTTGTTCAATGAAGGACTTTTAGGAAGGGGGATTGATTTTATAGTTAGAGCATGGAAGGATGATTTTCAATAGGACTAAGAATCTCTGAAGCAATATTTTGTGGTGGGGTTGGTGTTGCATTACTTCACATTGCCTAGAGATGATCATTTGTTATAAGGTCCAAACAGATTGCTATGGCTACTTTTGGACTCTGGAGCCCATGGATATCGAGGTTCTACAAGCGGTAATTCCTGATACTATGGTAAAAGGGGTAGTTTGAATGTGGGAGTTGTTCTTATTTTACTCAAAGGATTTGAAATAGTCCCCAATCTGTCTTTTTCAAGAACATTTCTTCCTAGGCCTCGGACTTCAAATTGTAAGGTGTTTCCAGGTGTTTCCATTGCATAAGAAAAAACTCAATTGGATCTAGAGATACTAAGCTAAAATTAATTTGAGAAATGTTTTATC

Coding sequence (CDS)

ATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGA

Protein sequence

MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGEPPIVYKSMDS

Homology

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BLAST of Carg10829 vs. NCBI nr
Match: KAG7030463.1 (Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.7 bits (761), Expect = 5.1e-77
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGEPPIVYKSMDS 142
           RLGDYLVDQGEPPIVYKSMDS
Sbjct: 121 RLGDYLVDQGEPPIVYKSMDS 141

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BLAST of Carg10829 vs. NCBI nr
Match: XP_022946037.1 (profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 4.7e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

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BLAST of Carg10829 vs. NCBI nr
Match: XP_023546560.1 (profilin-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

[Close]

BLAST of Carg10829 vs. NCBI nr
Match: XP_022999543.1 (profilin-1 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

[Close]

BLAST of Carg10829 vs. NCBI nr
Match: XP_022154695.1 (profilin-1 [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 118/130 (90.77%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP FKPEEI+AIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT +AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL+DQG
Sbjct: 121 RLGDYLIDQG 130

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BLAST of Carg10829 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 9.4e-66
Identity = 115/130 (88.46%), Postives = 123/130 (94.62%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL+SAAIIG DGSVWAQS TFP+FKPEEI AIMNDF+EPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYL G+KYMVIQGEPGAVIRGKKGPGGVTVKKT  AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL+DQG
Sbjct: 121 RLGDYLIDQG 130

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BLAST of Carg10829 vs. ExPASy Swiss-Prot
Match: Q5XWE1 (Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-65
Identity = 114/130 (87.69%), Postives = 123/130 (94.62%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL+SAAIIG DGSVWA+SE FP+ KPEEI  I+NDF+EPGTL
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLTSAAIIGQDGSVWAKSENFPQLKPEEITGILNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLY+GGSKYMVIQGEPGAVIRGKKGPGGVTVKKT LALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYIGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTALALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL++QG
Sbjct: 121 RLGDYLIEQG 130

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BLAST of Carg10829 vs. ExPASy Swiss-Prot
Match: O65809 (Profilin-1 OS=Glycine max OX=3847 GN=PRO1 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.7e-65
Identity = 113/130 (86.92%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHL+CDIEGNHL+ AAIIG DGSVWAQS  FP+FKPEEI AIMNDF+EPG+L
Sbjct: 1   MSWQAYVDDHLLCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKTG AL+IGIYDEPMTPGQCNM+VE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVE 120

Query: 121 RLGDYLVDQG 131
           R GDYL+DQG
Sbjct: 121 RPGDYLIDQG 130

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BLAST of Carg10829 vs. ExPASy Swiss-Prot
Match: Q8GT39 (Profilin OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.7e-65
Identity = 113/130 (86.92%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHLS+AAIIGHDGSVWAQS TFP+ KPEE+  I+NDF+EPG+L
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKK+ LAL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLV+QG
Sbjct: 121 RLGDYLVEQG 130

[Close]

BLAST of Carg10829 vs. ExPASy Swiss-Prot
Match: Q5FX67 (Profilin OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.0e-65
Identity = 111/130 (85.38%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVD+HLMC+IEGNHL+SAAIIG DGSVWAQS+ FP+ KPEE+A I+ DF++PGTL
Sbjct: 1   MSWQVYVDEHLMCEIEGNHLTSAAIIGQDGSVWAQSQNFPQLKPEEVAGIVGDFADPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLY+GG+KYMVIQGEPGAVIRGKKGPGG TVKKTG+ALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGATVKKTGMALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL+DQG
Sbjct: 121 RLGDYLIDQG 130

[Close]

BLAST of Carg10829 vs. ExPASy TrEMBL
Match: A0A6J1G2P2 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

[Close]

BLAST of Carg10829 vs. ExPASy TrEMBL
Match: A0A6J1KK00 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

[Close]

BLAST of Carg10829 vs. ExPASy TrEMBL
Match: A0A6J1DKC9 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 118/130 (90.77%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP FKPEEI+AIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT +AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL+DQG
Sbjct: 121 RLGDYLIDQG 130

[Close]

BLAST of Carg10829 vs. ExPASy TrEMBL
Match: A0A6J1HSG7 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.9e-65
Identity = 117/130 (90.00%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSW VYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQS++FP+FKPEEI AIMNDF+EPG L
Sbjct: 1   MSWNVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSDSFPQFKPEEITAIMNDFNEPGVL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT LAL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL++QG
Sbjct: 121 RLGDYLIEQG 130

[Close]

BLAST of Carg10829 vs. ExPASy TrEMBL
Match: A0A1R3IJL8 (Profilin OS=Corchorus capsularis OX=210143 GN=CCACVL1_11776 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 116/130 (89.23%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL++AAIIGHDGSVWAQS  FP+FKPEEI  IMNDF+EPGTL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTAAAIIGHDGSVWAQSSNFPQFKPEEITGIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKTG A++IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAAMIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

[Close]

BLAST of Carg10829 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 221.1 bits (562), Expect = 5.7e-58
Identity = 99/130 (76.15%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMCD+ GN L++AAI+G DGSVWAQS  FP+ KPEEI  I +DF+ PGTL
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG+KYMVIQGEP AVIRGKKG GGVT+KKT LALV GIYDEPMTPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLVDQG 131
            LG+YL++ G
Sbjct: 158 NLGEYLIESG 167

[Close]

BLAST of Carg10829 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 218.0 bits (554), Expect = 4.8e-57
Identity = 96/133 (72.18%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDI---EGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEP 60
           MSWQ YVD+HLMCD+   +G+HL++AAIIGHDGSVWAQS  FP+FKP+EI  IM DF EP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNM 120
           G LAPTG++L G KYMVIQGEP AVIRGKKG GG+T+KKTG ++V G+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVERLGDYLVDQG 131
           +VERLGDYL++QG
Sbjct: 121 VVERLGDYLIEQG 133

[Close]

BLAST of Carg10829 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 218.0 bits (554), Expect = 4.8e-57
Identity = 98/128 (76.56%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMCD+EGNHL++AAI+G DGSVWAQS  FP+ KP+EI  I  DF EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMVIQGE GAVIRGKKGPGGVT+KKT  ALV G YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLVD 129
           RLGDYL++
Sbjct: 121 RLGDYLIE 128

[Close]

BLAST of Carg10829 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-56
Identity = 98/130 (75.38%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC++EGNHL+ AAI G DGSVWAQS  FP+ KP EIA I  DF E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMV+QGE GAVIRGKKGPGGVT+KKT  ALV GIYDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL++ G
Sbjct: 121 RLGDYLIESG 130

[Close]

BLAST of Carg10829 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-56
Identity = 95/133 (71.43%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDI---EGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEP 60
           MSWQ YVD+HLMCD+   +G+HL++AAI+GHDGSVWAQS  FP+FK +E + IM DF EP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNM 120
           G LAPTGL++ G+KYMVIQGEPGAVIRGKKG GG+T+KKTG + V GIY+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVERLGDYLVDQG 131
           +VERLGDYL++QG
Sbjct: 121 VVERLGDYLLEQG 133

The following BLAST results are available for this feature:

BLAST of Carg10829 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030463.1	5.1e-77	100.00	Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022946037.1	4.7e-70	100.00	profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata]	[more]
XP_023546560.1	1.0e-69	99.23	profilin-1 [Cucurbita pepo subsp. pepo]	[more]
XP_022999543.1	2.3e-69	98.46	profilin-1 [Cucurbita maxima]	[more]
XP_022154695.1	4.5e-65	90.77	profilin-1 [Momordica charantia]	[more]

BLAST of Carg10829 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82572	9.4e-66	88.46	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
Q5XWE1	2.1e-65	87.69	Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1	[more]
O65809	4.7e-65	86.92	Profilin-1 OS=Glycine max OX=3847 GN=PRO1 PE=1 SV=1	[more]
Q8GT39	4.7e-65	86.92	Profilin OS=Prunus persica OX=3760 PE=1 SV=1	[more]
Q5FX67	8.0e-65	85.38	Profilin OS=Cucumis melo OX=3656 PE=1 SV=1	[more]

BLAST of Carg10829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2P2	2.3e-70	100.00	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1	[more]
A0A6J1KK00	1.1e-69	98.46	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1	[more]
A0A6J1DKC9	2.2e-65	90.77	Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1	[more]
A0A6J1HSG7	4.9e-65	90.00	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1	[more]
A0A1R3IJL8	1.4e-64	89.23	Profilin OS=Corchorus capsularis OX=210143 GN=CCACVL1_11776 PE=3 SV=1	[more]

BLAST of Carg10829 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56600.1	5.7e-58	76.15	profilin 3	[more]
AT2G19770.1	4.8e-57	72.18	profilin 5	[more]
AT2G19760.1	4.8e-57	76.56	profilin 1	[more]
AT4G29350.1	1.8e-56	75.38	profilin 2	[more]
AT4G29340.1	3.1e-56	71.43	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 27..40 score: 82.21 coord: 71..80 score: 96.73 coord: 84..99 score: 78.07 coord: 104..117 score: 92.08 coord: 1..14 score: 84.42 coord: 52..66 score: 75.52 coord: 117..130 score: 80.65
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 113..130 score: 69.44 coord: 40..60 score: 54.4 coord: 21..30 score: 67.0 coord: 3..12 score: 72.0 coord: 64..78 score: 69.0 coord: 100..113 score: 69.46
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 2.5E-59 score: 213.1
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 1.4E-41 score: 141.6
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..130
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 9.82338E-59 score: 176.362
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..130 e-value: 5.4E-56 score: 190.3
None	No IPR available	PANTHER	PTHR11604:SF47	PROFILIN	coord: 1..130
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10829-RA	Carg10829-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding