Carg10794 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10794
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S3
Location	Carg_Chr05: 12054113 .. 12056338 (+)
RNA-Seq Expression	Carg10794
Synteny	Carg10794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCCAGATGAGTAAGAAGAGAAAGGTTAGTCCACGAAATTTCTTAATTTGTACTTCTTTCCTCACCATCTCTACAACGATTTATCCGTTCTGCTATGTATTCATTGTGTTTTATGTTCGATTTTGTTTCAGTTTGTGGCCGATGGAGTGTTTTTCGCCGAGCTAAACGAGGTTTTGACCAGGGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCAATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTTAGTTTACCTTGGTTTTGAAATTCAGTTGATTAAACAACCTGATTTCTTCGTTCACTGGATTTAATGTCTTATTAACATTCATCAATCTTACGTTCATAATTTTATTCGAATTTTTTGTTGGTTATTTAGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTCTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCTATTGCCCAAGCCGAGTCTCTTCGTTATAAGCTTCTTGGTGGCCTTGCTGTGCGGAGGTACTTTTTCGTTTTCCTTCGCATAACCACTTATAGCATTTTTATTATTGTTTTGTGGATTTGTCTTGGAAATGGAAATATGATTTATGATTAGGAAAGAATAAAGATCACAGATTCCTTATTTTCTTGCTCACAGCTCTGATATATGGTTCTAACAATCTCATTTATGGGATGACTTCGTTTTAGTTTCATAAAAGATGGGTTTGTCCTTGATGTTTTCTTATGTCATCTACAAAGCAGATTGGTGTTTTGGTACCAATCTTGTGTCGGAAGGTGACAATATAAATTGTACTCTTCCGTTTGATAATCATTGTGGAATCATTTTGTTTCACACTGTAACCTTAGGGAGGAGACATGCTTCTGCCTCCATATTTTCCTCAAACTTTTTCCTCCATATTTTCTGAATCTAGAATGGAAAATTCACAATACGTTGAATTAGTAAAATTAATACAGTTTATTATATATTAGCGTAATTTACACATGCCAACCTCATATTTTTGAAGAATAGGCAAATTAATAATATATTTTTAAAATATTTATGTGGGACTCTGAGATTTGTGTGCTCTCCTGGAGGTGTGAATCAATAGTTTGAGCCTTGCCACTAGGCTGAAGCCTTGAATTGGCTGTTCTTTAACTGAATGTTTGGTTTGTATACTTTTCATTTTTCGTGTGTATATTATTACCTACTAGGTAATGTTGCTACTAAGACCTGCCCCTTTTATTCGTTGTGGTAAAACATTGAAGTTGATTGATTTTGGGCCTATGATGCTATTTTATATCTTTTGACTGATCTATTAATAGTGACAGTTTCAGAGTGACACTATATTACTATTAGCCAATCTGCTGCATGCTTATTTATGTTCTTTTTCCATCAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTAGCTTGTAGCTCAATCCATTGTTATCACTATGTGAAAAGTTTGTATAAGGGATGTTAACATGTAATGCTCAACATGCAAACAGGTTATTGTCAGTGGAAAACTGAGAGCACAGCGTGCAAAGTCTATGAAGTTTAAAGATGGATATATGATATCTTCGGGTCAACCAGTGAGAGATTATATTGACTCAGCTGTTAGGCACGTTCTTCTCAGACAGGTTAGCTTTTGAGAGTTCATAAGAAACAGGTGCTTACATGTTATTACATCTGTCATTTGGCTTAATGTTGTTTTGTTTTTGGGTCAGGGAGTTCTTGGTATCAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGTCCCTACCACCCCTCTTCCTGATGTTGTCGTAATCCATTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAGCAGCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGTAGTAGCAGCTTGAGAGGCTCTTTTTTTTCTTCTAGATATTTATTCATGGAATCAACCATCATCATTTTTGTATTTTCTGTCCCAAGATTTCGTTTCATGTCTCATTGATCTGTTGGTTTGAGCCTCCTGACTGCCCAACTTTCTTTTGGATAATCAAACAAAATGCATATGGAGAACAGTTTTTTATGATCCCTTAGCCTTTTTATATATTATTAGCTTTTG

mRNA sequence

ATGGCGACCCAGATGAGTAAGAAGAGAAAGTTTGTGGCCGATGGAGTGTTTTTCGCCGAGCTAAACGAGGTTTTGACCAGGGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCAATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTCTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCTATTGCCCAAGCCGAGTCTCTTCGTTATAAGCTTCTTGGTGGCCTTGCTGTGCGGAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTATTGTCAGTGGAAAACTGAGAGCACAGCGTGCAAAGTCTATGAAGTTTAAAGATGGATATATGATATCTTCGGGTCAACCAGTGAGAGATTATATTGACTCAGCTGTTAGGCACGTTCTTCTCAGACAGGGAGTTCTTGGTATCAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGTCCCTACCACCCCTCTTCCTGATGTTGTCGTAATCCATTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAGCAGCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGTAGTAGCAGCTTGAGAGGCTCTTTTTTTTCTTCTAGATATTTATTCATGGAATCAACCATCATCATTTTTGTATTTTCTGTCCCAAGATTTCGTTTCATGTCTCATTGATCTGTTGGTTTGAGCCTCCTGACTGCCCAACTTTCTTTTGGATAATCAAACAAAATGCATATGGAGAACAGTTTTTTATGATCCCTTAGCCTTTTTATATATTATTAGCTTTTG

Coding sequence (CDS)

ATGGCGACCCAGATGAGTAAGAAGAGAAAGTTTGTGGCCGATGGAGTGTTTTTCGCCGAGCTAAACGAGGTTTTGACCAGGGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCAATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTCTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCTATTGCCCAAGCCGAGTCTCTTCGTTATAAGCTTCTTGGTGGCCTTGCTGTGCGGAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTATTGTCAGTGGAAAACTGAGAGCACAGCGTGCAAAGTCTATGAAGTTTAAAGATGGATATATGATATCTTCGGGTCAACCAGTGAGAGATTATATTGACTCAGCTGTTAGGCACGTTCTTCTCAGACAGGGAGTTCTTGGTATCAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGTCCCTACCACCCCTCTTCCTGA

Protein sequence

MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPYHPSS

Homology

[Close]

BLAST of Carg10794 vs. NCBI nr
Match: KAG7030498.1 (40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHPSS 206
           VLGIKVKIMLDWDPKGKQGPYHPSS
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPYHPSS 205

[Close]

BLAST of Carg10794 vs. NCBI nr
Match: XP_022946744.1 (40S ribosomal protein S3-2-like [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. NCBI nr
Match: XP_022938091.1 (40S ribosomal protein S3-2-like [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. NCBI nr
Match: KAG6586486.1 (40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102
Identity = 188/203 (92.61%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLG+KVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTP 203

[Close]

BLAST of Carg10794 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 5.3e-102
Identity = 188/203 (92.61%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDP GK GP  P
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTP 203

[Close]

BLAST of Carg10794 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 1.6e-101
Identity = 187/203 (92.12%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVK+MLDWDPKG  GP  P
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTP 203

[Close]

BLAST of Carg10794 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-92
Identity = 175/203 (86.21%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIML WDP GK GP  P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKP 203

[Close]

BLAST of Carg10794 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-92
Identity = 175/203 (86.21%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIML WDP GK GP  P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKP 203

[Close]

BLAST of Carg10794 vs. ExPASy TrEMBL
Match: A0A6J1HP95 (40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465403 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. ExPASy TrEMBL
Match: A0A6J1G4R4 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. ExPASy TrEMBL
Match: A0A6J1FC65 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444280 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTP 203

[Close]

BLAST of Carg10794 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 374.0 bits (959), Expect = 7.6e-104
Identity = 188/203 (92.61%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLG+KVKIMLDWDPKGKQGP  P
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTP 203

[Close]

BLAST of Carg10794 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-103
Identity = 188/203 (92.61%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVKIMLDWDP GK GP  P
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTP 203

[Close]

BLAST of Carg10794 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-102
Identity = 187/203 (92.12%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPYHP 204
           VLGIKVK+MLDWDPKG  GP  P
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTP 203

The following BLAST results are available for this feature:

BLAST of Carg10794 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030498.1	1.3e-108	100.00	40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022946744.1	2.2e-105	99.01	40S ribosomal protein S3-2-like [Cucurbita moschata]	[more]
XP_038890738.1	2.2e-105	99.01	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
XP_022938091.1	2.2e-105	99.01	40S ribosomal protein S3-2-like [Cucurbita moschata]	[more]
KAG6586486.1	2.2e-105	99.01	40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg10794 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	1.1e-102	92.61	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9SIP7	5.3e-102	92.61	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
Q9M339	1.6e-101	92.12	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
P02350	1.3e-92	86.21	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	1.3e-92	86.21	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of Carg10794 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HP95	1.1e-105	99.01	40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465403 PE=3...	[more]
A0A0A0LHQ6	1.1e-105	99.01	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A6J1G4R4	1.1e-105	99.01	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE...	[more]
A0A6J1FC65	1.1e-105	99.01	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444280 PE...	[more]
A0A1S3CAV4	1.1e-105	99.01	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]

BLAST of Carg10794 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	7.6e-104	92.61	Ribosomal protein S3 family protein	[more]
AT2G31610.1	3.8e-103	92.61	Ribosomal protein S3 family protein	[more]
AT3G53870.1	1.1e-102	92.12	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..91 e-value: 1.3E-48 score: 164.8
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..93 e-value: 7.8E-13 score: 48.1
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 11.333969
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..205 e-value: 9.5E-59 score: 198.9
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..191
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 106..188 e-value: 1.7E-25 score: 89.4
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..191 e-value: 3.0E-70 score: 233.9
None	No IPR available	PANTHER	PTHR11760:SF52	40S RIBOSOMAL PROTEIN S3-RELATED	coord: 3..203
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 3..203
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..95 e-value: 4.50846E-52 score: 160.466
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 147..183
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10794-RA	Carg10794-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome