Carg08912 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08912
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein FAM98A-like isoform X1
Location	Carg_Chr02: 9418041 .. 9420100 (-)
RNA-Seq Expression	Carg08912
Synteny	Carg08912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGGTATCAGAAGGTCGAGAAGCCCAAACCTGAATTACCTATTAACGAAAATGAGATCCGAATCACTACTCAAGGCGCCATTCGAAACTACATCACATATGCCTCTACACTGCTCCAGGTATTTCGTCTTCCCATTCAATCTCCTCTACGCTTTACTTCCATCATCTGATTGCATTTCACAATGTCCGCTTGCTGATTCCTTTTTTTTTTTTTTTTTTTCTCCCTATTTTGTGTGTGTGTGGCAATGCTGTGTCCGTTCTGTAGGATTCGGTTCGTTTTTTTCAATTTGGAACTGTCTGTGTGCCAATCGATTTGGGCTGCTCTGGAATTTGTTCTTAGTTCTCGATGATTCGATAATTTCTGGGGTTGCCTGTGTAATTGTTTCGATATGTTAATTCGTGTATTCTTCTAGGTATTGGGAAGAACTTTATTAATTATCACTTATAGTTTAGTTACGAATGATAGAGACAAAAAATTGAATCACATTGAATGTTGTTGTTCTTGGAACTTATTCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCTATTTCAGAAATTATAAAGGTTTATTTCCTTAGAATATGCGTGCGTTTGAGTTCAAATGTTGTGTAGTTCGTAATTGATTAGCTTTGCGTATCCCCAAAACAGAAGAGAATACCGCGGTTGCATCAACTAATAGCCATCAGTTCAGTTAGCATAACTGATGTATGGGAACCAATTGAAGAGGGTCTTGTACCGTAAGTTTTCTTAATCTTTGCTCTCAGATTTAATTGTATAACAAAGAATTGAGAACCTGCTTGTGTCTTGGTTGATTTGCACTCACTCTATATGCGTCGCTCACTACTTTGTTGCATGTTCTATGGGTTTGTACTATGTAGCTTACTCCTTTAGACGTGCACGAAATAACTTCTAACATGTCACACAGGGTGGAGATGACTCGTCATGTCTCGATGATTTCAATTACATTGTCCAATCGAGAGCTAAATAAAAGTTCTCCAGGGTAAGTTGCTGTATTTTTGCTGATTCTGCAATTTGGTATAAAATGTGGGATTTTAGCTACTTTTCTTACATATTTCATGTTGTTTCTTCCACATGCATGATTATGAAATAACTTTTGTTTGTAGGTATCAAGCTCCATACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAACAGCAGCCTCCTCAACAACAACAACCACCCAGACAACATCGCATTTATCACAATGCTGTTAATGAAGGTGATTTCGACATTTTACCATTGGATCGTACGCTACCTCGTATAGATTTTTACATATTTTTGGCATTTTTGCAGATCCATATGGCCAAGGGAGAGGACGTGGTAGAGGGAGAGGGCGCGGTTGGGGAAGAGGTGGATATGGGAACTACCAAGGTGGATACGGCAACTACCAAGGTGGATACGGCCAGTACCAAGGTGGTTACGGCCAGTACCAAGGTGGATCTGACAACTACCATGGTGGATCTGGATATTATCAAGGTGAATATGGAATTATCAGATAGTTTAGATTGAAGTATGTTCTAAAGTGTTTACTGGATTGCATTAGCCTTCATACTGTTCTGGAGTAGGATTTTTAAATTTTGTGAGTTTTATTCATCATAGATAATGGGAACTATCAAGGTGGATATTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCGGCTGGGCTTATCGCGGTAAGTTTCTTTCTCTAATTTCTCCGCACATTGCAAAAATACAAGCCAAATCTGTCCTTGAGTTGTCTGTAGGAATGTTTTGAAAATTATTGCAATGCGGTGACTTGTTAAGTTTTCTTCAAAATCATAGCCAGTAATGAAGGTGTATGTAGCTCTATAATGTTTGCGAAATGCTCATGGGAACAAGGCGTTTCAAGCGATTATTTTCTTCCTGCAGGAGCTGGATACGAAAGAGGCAGAGGAGTAGGGGGTAGAGGTTATGGCCGTGGACGGGGGCGAATGGGCGGTCGGGCAAGGGGCAGTGGTGGAAACCAGGTTTAG

mRNA sequence

ATGGATAGGTATCAGAAGGTCGAGAAGCCCAAACCTGAATTACCTATTAACGAAAATGAGATCCGAATCACTACTCAAGGCGCCATTCGAAACTACATCACATATGCCTCTACACTGCTCCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCTATTTCAGAAATTATAAAGAAGAGAATACCGCGGTTGCATCAACTAATAGCCATCAGTTCAGTTAGCATAACTGATGTATGGGAACCAATTGAAGAGGGTCTTGTACCGGTGGAGATGACTCGTCATGTCTCGATGATTTCAATTACATTGTCCAATCGAGAGCTAAATAAAAGTTCTCCAGGGTATCAAGCTCCATACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAACAGCAGCCTCCTCAACAACAACAACCACCCAGACAACATCGCATTTATCACAATGCTGTTAATGAAGATCCATATGGCCAAGGGAGAGGACGTGGTAGAGGGAGAGGGCGCGGTTGGGGAAGAGGTGGATATGGGAACTACCAAGGTGGATACGGCAACTACCAAGGTGGATACGGCCAGTACCAAGGTGGTTACGGCCAGTACCAAGGTGGATCTGACAACTACCATGGTGGATCTGGATATTATCAAGATAATGGGAACTATCAAGGTGGATATTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCGGCTGGGCTTATCGCGGAGCTGGATACGAAAGAGGCAGAGGAGTAGGGGGTAGAGGTTATGGCCGTGGACGGGGGCGAATGGGCGGTCGGGCAAGGGGCAGTGGTGGAAACCAGGTTTAG

Coding sequence (CDS)

ATGGATAGGTATCAGAAGGTCGAGAAGCCCAAACCTGAATTACCTATTAACGAAAATGAGATCCGAATCACTACTCAAGGCGCCATTCGAAACTACATCACATATGCCTCTACACTGCTCCAGGAAAAACGTGTCAGAGAGATCGTCTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCTATTTCAGAAATTATAAAGAAGAGAATACCGCGGTTGCATCAACTAATAGCCATCAGTTCAGTTAGCATAACTGATGTATGGGAACCAATTGAAGAGGGTCTTGTACCGGTGGAGATGACTCGTCATGTCTCGATGATTTCAATTACATTGTCCAATCGAGAGCTAAATAAAAGTTCTCCAGGGTATCAAGCTCCATACTTTGTGGAACAGCCAAAGCAACAATATAACAATCAACAGCAGCCTCCTCAACAACAACAACCACCCAGACAACATCGCATTTATCACAATGCTGTTAATGAAGATCCATATGGCCAAGGGAGAGGACGTGGTAGAGGGAGAGGGCGCGGTTGGGGAAGAGGTGGATATGGGAACTACCAAGGTGGATACGGCAACTACCAAGGTGGATACGGCCAGTACCAAGGTGGTTACGGCCAGTACCAAGGTGGATCTGACAACTACCATGGTGGATCTGGATATTATCAAGATAATGGGAACTATCAAGGTGGATATTCAAATTGGGGAAGAGGAGGTGGGCGGAGTAGAGGCGGCTGGGCTTATCGCGGAGCTGGATACGAAAGAGGCAGAGGAGTAGGGGGTAGAGGTTATGGCCGTGGACGGGGGCGAATGGGCGGTCGGGCAAGGGGCAGTGGTGGAAACCAGGTTTAG

Protein sequence

MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKSSPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV

Homology

[Close]

BLAST of Carg08912 vs. NCBI nr
Match: KAG7036264.1 (Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.0 bits (1351), Expect = 4.0e-145
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGRGWG 180
           SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGRGWG
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGRGWG 180

Query: 181 RGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGRGGG 240
           RGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGRGGG
Sbjct: 181 RGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGRGGG 240

Query: 241 RSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 284
           RSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV
Sbjct: 241 RSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 283

[Close]

BLAST of Carg08912 vs. NCBI nr
Match: XP_022930954.1 (RNA-binding protein FUS-like [Cucurbita moschata])

HSP 1 Score: 517.3 bits (1331), Expect = 8.3e-143
Identity = 282/287 (98.26%), Postives = 282/287 (98.26%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQ----PPRQHRIYHNAVNEDPYGQGRGRGRGRG 180
           SPGYQAPYFVEQPKQQYNNQQQPPQQQQ    PPRQHRIYHNAVNEDPYGQGRGRGRGRG
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQQQQPPPRQHRIYHNAVNEDPYGQGRGRGRGRG 180

Query: 181 RGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWG 240
           RGWGRGGYGNYQGGYGNYQGGYG YQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWG
Sbjct: 181 RGWGRGGYGNYQGGYGNYQGGYGHYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWG 240

Query: 241 RGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 284
           RGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV
Sbjct: 241 RGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 287

[Close]

BLAST of Carg08912 vs. NCBI nr
Match: XP_023533717.1 (uncharacterized protein LOC111795492 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514.6 bits (1324), Expect = 5.4e-142
Identity = 281/289 (97.23%), Postives = 283/289 (97.92%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQ------PPRQHRIYHNAVNEDPYGQGRGRGRG 180
           SPGYQAPYFVEQPKQQYNNQQQPPQQQQ      PPRQHRIY+NAVNEDPYGQGRGRGRG
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQQQQQPPPPRQHRIYNNAVNEDPYGQGRGRGRG 180

Query: 181 RGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSN 240
           RGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSN
Sbjct: 181 RGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSN 240

Query: 241 WGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 284
           WGRGGGR+RGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV
Sbjct: 241 WGRGGGRNRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 289

[Close]

BLAST of Carg08912 vs. NCBI nr
Match: KAG6606324.1 (Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514.6 bits (1324), Expect = 5.4e-142
Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPP---QQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGR 180
           SPGYQAPYFVEQPKQQYNNQQQPP   QQQQPPRQHRIYHNAVNED YGQGRGRGRGRGR
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQQQQPPRQHRIYHNAVNEDSYGQGRGRGRGRGR 180

Query: 181 GWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGR 240
           GWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGR
Sbjct: 181 GWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGR 240

Query: 241 GGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQ 283
           GGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQ
Sbjct: 241 GGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQ 285

[Close]

BLAST of Carg08912 vs. NCBI nr
Match: XP_022995595.1 (keratin, type I cytoskeletal 9-like [Cucurbita maxima])

HSP 1 Score: 505.0 bits (1299), Expect = 4.3e-139
Identity = 279/295 (94.58%), Postives = 280/295 (94.92%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPP-----QQQQPPRQHRIYHNAVNEDPYGQGRGRGRGR 180
           SPGYQAPYFVEQPKQQYNNQQQPP     QQQQPPRQH IYHNA NEDPYGQGRGRGRGR
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQQQQQQPPRQHHIYHNAANEDPYGQGRGRGRGR 180

Query: 181 GRGWGRGG-------YGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNY 240
           GRGWGRGG       YGNYQGGYG YQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNY
Sbjct: 181 GRGWGRGGYGNYQGRYGNYQGGYGQYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNY 240

Query: 241 QGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 284
           QGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV
Sbjct: 241 QGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 295

[Close]

BLAST of Carg08912 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.8e-13
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 10  PKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKAVAISEIIKK 69
           P P+LP +  E+R+     IRN +  A   L+    R +V    G+A  KAV+ +EI+K+
Sbjct: 17  PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVKR 76

Query: 70  RIPRLHQLIAISSVSITDVWEPI--EEGLVPVEMTRHVSMISITLSNRELNKSSPGYQAP 128
           R+P LHQL  +  +   D W P   + GL P+ + RHV  + + LS   L+ S  GYQ P
Sbjct: 77  RVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECGYQPP 136

[Close]

BLAST of Carg08912 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.4e-13
Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 1   MDRYQK-------VEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAM 60
           M+ Y+K          P P+LP +  E+R+     IRN +  A   L+    R +V    
Sbjct: 1   MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60

Query: 61  GQAISKAVAISEIIKKRIPRLHQLIAISSVSITDVWEPI--EEGLVPVEMTRHVSMISIT 120
           G+A  KAV+ +EI+K+R+P LHQL  +  +   D W P   + GL P+ + RHV  + + 
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120

Query: 121 LSNRELNKSSPGYQAP 128
           LS   L+ +  GYQ P
Sbjct: 121 LSRDPLDPNECGYQPP 136

[Close]

BLAST of Carg08912 vs. ExPASy Swiss-Prot
Match: Q9SL15 (Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.9e-05
Identity = 48/91 (52.75%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 160 VNEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGS 219
           V  D  G G   G     G  +GG GNYQGG GNYQGG G YQGG G+YQGG   Y GG 
Sbjct: 37  VKPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGG 96

Query: 220 GYYQDNGNYQGGYSNWGRGGGRSRGGWAYRG 251
           G YQ  G  QGG    G GG   R G  YRG
Sbjct: 97  GRYQGGGGRQGG---GGSGGSYCRHGCCYRG 124

[Close]

BLAST of Carg08912 vs. ExPASy TrEMBL
Match: A0A6J1ESY4 (RNA-binding protein FUS-like OS=Cucurbita moschata OX=3662 GN=LOC111437292 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.0e-143
Identity = 282/287 (98.26%), Postives = 282/287 (98.26%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQ----PPRQHRIYHNAVNEDPYGQGRGRGRGRG 180
           SPGYQAPYFVEQPKQQYNNQQQPPQQQQ    PPRQHRIYHNAVNEDPYGQGRGRGRGRG
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQQQQPPPRQHRIYHNAVNEDPYGQGRGRGRGRG 180

Query: 181 RGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWG 240
           RGWGRGGYGNYQGGYGNYQGGYG YQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWG
Sbjct: 181 RGWGRGGYGNYQGGYGNYQGGYGHYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWG 240

Query: 241 RGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 284
           RGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV
Sbjct: 241 RGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 287

[Close]

BLAST of Carg08912 vs. ExPASy TrEMBL
Match: A0A6J1K4E2 (keratin, type I cytoskeletal 9-like OS=Cucurbita maxima OX=3661 GN=LOC111491084 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139
Identity = 279/295 (94.58%), Postives = 280/295 (94.92%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPP-----QQQQPPRQHRIYHNAVNEDPYGQGRGRGRGR 180
           SPGYQAPYFVEQPKQQYNNQQQPP     QQQQPPRQH IYHNA NEDPYGQGRGRGRGR
Sbjct: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQQQQQQPPRQHHIYHNAANEDPYGQGRGRGRGR 180

Query: 181 GRGWGRGG-------YGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNY 240
           GRGWGRGG       YGNYQGGYG YQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNY
Sbjct: 181 GRGWGRGGYGNYQGRYGNYQGGYGQYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNY 240

Query: 241 QGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 284
           QGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV
Sbjct: 241 QGGYSNWGRGGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQV 295

[Close]

BLAST of Carg08912 vs. ExPASy TrEMBL
Match: A0A5A7VGR8 (Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003370 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.0e-123
Identity = 256/282 (90.78%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPE PINENEIRIT+QGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAI+EI+KKRI RLHQ  AISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGRGWG 180
           SPGYQAP+FVEQPKQQYNN QQP  Q  PPRQ R+YHNAVNEDPYGQGRGRGRGRGRGWG
Sbjct: 121 SPGYQAPHFVEQPKQQYNN-QQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWG 180

Query: 181 RGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGRGGG 240
           RGGYGNYQGGYGNYQGGYG YQGGYG YQGGSDNY GG GYYQDN    GGYSNWGRGGG
Sbjct: 181 RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDN----GGYSNWGRGGG 240

Query: 241 RSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQ 283
           RSR GWAYRGAGYERGRG GGRGYGRGRGRMGGRARGSGGNQ
Sbjct: 241 RSR-GWAYRGAGYERGRG-GGRGYGRGRGRMGGRARGSGGNQ 275

[Close]

BLAST of Carg08912 vs. ExPASy TrEMBL
Match: A0A1S3BYB0 (protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.0e-123
Identity = 256/282 (90.78%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPE PINENEIRIT+QGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPESPINENEIRITSQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAI+EI+KKRI RLHQ  AISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGRGWG 180
           SPGYQAP+FVEQPKQQYNN QQP  Q  PPRQ R+YHNAVNEDPYGQGRGRGRGRGRGWG
Sbjct: 121 SPGYQAPHFVEQPKQQYNN-QQPLPQPPPPRQPRVYHNAVNEDPYGQGRGRGRGRGRGWG 180

Query: 181 RGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGRGGG 240
           RGGYGNYQGGYGNYQGGYG YQGGYG YQGGSDNY GG GYYQDN    GGYSNWGRGGG
Sbjct: 181 RGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDN----GGYSNWGRGGG 240

Query: 241 RSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGGNQ 283
           RSR GWAYRGAGYERGRG GGRGYGRGRGRMGGRARGSGGNQ
Sbjct: 241 RSR-GWAYRGAGYERGRG-GGRGYGRGRGRMGGRARGSGGNQ 275

[Close]

BLAST of Carg08912 vs. ExPASy TrEMBL
Match: A0A6J1HIE0 (protein FAM98A isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.9e-121
Identity = 253/283 (89.40%), Postives = 260/283 (91.87%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEKPKPELPI+ENEIRITTQGAIRNYITYASTLLQEKRVR+IVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPISENEIRITTQGAIRNYITYASTLLQEKRVRDIVLKAMGQAISKA 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAI+EI+KKRI RLHQ  AISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNK+
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKN 120

Query: 121 SPGYQAPYFVEQPKQQYNN---QQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGRGRGR 180
           SPGYQAP+FVEQPKQQYNN   QQQ P QQ PPRQ R+YHNAVNEDPYGQGRGRGRGRGR
Sbjct: 121 SPGYQAPHFVEQPKQQYNNQQQQQQQPPQQPPPRQPRVYHNAVNEDPYGQGRGRGRGRGR 180

Query: 181 GWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGGYSNWGR 240
           GWGRGGYGNYQGGYGNYQGGYG YQGGYG YQGGSDNY GG GYYQDN    GGYSNWGR
Sbjct: 181 GWGRGGYGNYQGGYGNYQGGYGHYQGGYGHYQGGSDNYQGGPGYYQDN----GGYSNWGR 240

Query: 241 GGGRSRGGWAYRGAGYERGRGVGGRGYGRGRGRMGGRARGSGG 281
           GGGRSR GWAYRGAGYERGRG GGRGY RGRGRMGGR RG GG
Sbjct: 241 GGGRSR-GWAYRGAGYERGRG-GGRGYSRGRGRMGGRTRGGGG 277

[Close]

BLAST of Carg08912 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-47
Identity = 171/351 (48.72%), Postives = 199/351 (56.70%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MDRYQ+V KPKPE PINENEIRIT++G IRNYI+YA++LLQEK V++IVLKAMGQAISK 
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           VAISEI+K +IP LHQ IAISS+SITDVWEP EEGL PVE+TRHVSMISITLS  ELNK 
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRG-------- 180
           SPGYQAP   +Q K QY        Q Q  RQ R+ +NA  E+      G          
Sbjct: 121 SPGYQAPAQSDQSKPQY--------QPQQGRQARLPYNAYGEEGEVVAEGEAGEEVDMET 180

Query: 181 -----RGRGRG------------------------------WGRGGY-GNYQGGY-GNYQ 240
                + + +G                               GRGGY G   GGY G   
Sbjct: 181 TKGVMKEKTKGTIKKIIKTMKVGIQTRAEAVDVVDEAMAIVGGRGGYGGGRDGGYGGGRD 240

Query: 241 GGYGQYQG-GYGQ-----YQGGSDNYHG-------GSGYYQDNGNYQGGYSNWGRGGGR- 284
            GYG+ +  GYG+     Y GG D+ +G       G G     G  +GG+   GRGGGR 
Sbjct: 241 DGYGERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGGRNDGYGGRRGGFRG-GRGGGRD 300

[Close]

BLAST of Carg08912 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40
Identity = 159/333 (47.75%), Postives = 187/333 (56.16%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+V KPK + PI+ NEIRIT+QG  RNYITYA TLLQ+K   E+V KAMG+AI+K 
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           V I E+IK+RIP LHQ  +I S  ITD WEP EEGL+P+E TRHVSMI+ITLS  ELN S
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120

Query: 121 SPGYQAPYFVEQPKQ----QYNNQQQPPQQQQPPR------------QHRIYHNAVNED- 180
           S GYQ P  +E  K      Y  ++  P  +   R            +   Y N  +ED 
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHEDG 180

Query: 181 ------PYGQGRGRGRGR-GRGWGRGGYGN--------YQGGYG----------NYQGGY 240
                  YG+GRGRGRGR  RG GRGGY            GGYG          + +GGY
Sbjct: 181 GWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHRGYDDRGGY 240

Query: 241 G---QYQGGYG--QYQGGSDNYHGGSGY---YQDNGNYQGGYSNWGRGG--GRSRGGWAY 280
               Q +GGY   Q +GG D   G  GY    Q  G Y G   + GRGG  G S+G   Y
Sbjct: 241 DAPPQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDG--PSQGRGGYDGPSQGRGGY 300

[Close]

BLAST of Carg08912 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 155.6 bits (392), Expect = 5.9e-38
Identity = 145/317 (45.74%), Postives = 171/317 (53.94%), Query Frame = 0


Query: 1   MDRYQKVEKPKPELPINENEIRITTQGAIRNYITYASTLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+VEKPK + PI ENEIRIT+ G  RNYITYA  LLQE +  E++ KAMG+AI+K+
Sbjct: 1   MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 61  VAISEIIKKRIPRLHQLIAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSNRELNKS 120
           V I E+IK+RIP LHQ+ +I S  ITD WEP EEGL  +E TRHVSMI+ITLS  +LN S
Sbjct: 61  VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120

Query: 121 SPGYQAPYFVEQPKQQYNNQQQPPQQQQPPRQHRIYHNAVNEDPYGQGRGRGR-GRGRGW 180
           S GYQ P  +E  K                    I +   +  P G+G  RGR GRGRG 
Sbjct: 121 SVGYQCPIPIEMVKP----------------LAEIDYEGQDGSPRGRGGRRGRGGRGRGR 180

Query: 181 GRGGYGNYQGGYGNYQGGYGQYQGGYG----QYQGGSDNYHG-GSGY----YQDNGNYQG 240
           GRGG GN         GG G+   G G    +Y  G     G GSGY    Y D G  Q 
Sbjct: 181 GRGGRGNGPANVEYDDGGRGRGGRGNGYVNNEYDDGGRGRGGRGSGYVNNEYNDGGMEQD 240

Query: 241 GYSNWGRGGGRSRGGW-AYRGAG---------YERGRGVGGRGY---------------- 280
              ++GRG GR RGG    RG G         YE  +  G  GY                
Sbjct: 241 --RSYGRGRGRGRGGGRGGRGRGGYNGPPPPYYEAQQDGGDYGYNNVAPPADHGYDGPPP 299

[Close]

BLAST of Carg08912 vs. TAIR 10
Match: AT2G05520.1 (glycine-rich protein 3 )

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-06
Identity = 48/91 (52.75%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 160 VNEDPYGQGRGRGRGRGRGWGRGGYGNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGS 219
           V  D  G G   G     G  +GG GNYQGG GNYQGG G YQGG G+YQGG   Y GG 
Sbjct: 37  VKPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGG 96

Query: 220 GYYQDNGNYQGGYSNWGRGGGRSRGGWAYRG 251
           G YQ  G  QGG    G GG   R G  YRG
Sbjct: 97  GRYQGGGGRQGG---GGSGGSYCRHGCCYRG 124

[Close]

BLAST of Carg08912 vs. TAIR 10
Match: AT2G05520.2 (glycine-rich protein 3 )

HSP 1 Score: 45.4 bits (106), Expect = 8.6e-05
Identity = 44/79 (55.70%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 175 RGRGWGRGGY---GNYQGGYGNYQGGYGQYQGGYGQYQGGSDNYHGGSGYYQDNGNYQGG 234
           RG G   G Y   G YQGG GNYQGG G YQGG G+YQGG   Y GG G YQ  G  QGG
Sbjct: 42  RGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGRYQGGGGRYQGGGGRYQGGGGRQGG 101

Query: 235 YSNWGRGGGRSRGGWAYRG 251
               G GG   R G  YRG
Sbjct: 102 ---GGSGGSYCRHGCCYRG 117

The following BLAST results are available for this feature:

BLAST of Carg08912 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036264.1	4.0e-145	100.00	Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma...	[more]
XP_022930954.1	8.3e-143	98.26	RNA-binding protein FUS-like [Cucurbita moschata]	[more]
XP_023533717.1	5.4e-142	97.23	uncharacterized protein LOC111795492 [Cucurbita pepo subsp. pepo]	[more]
KAG6606324.1	5.4e-142	98.60	Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma...	[more]
XP_022995595.1	4.3e-139	94.58	keratin, type I cytoskeletal 9-like [Cucurbita maxima]	[more]

BLAST of Carg08912 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99JH1	3.8e-13	36.67	Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp2...	[more]
Q8N5L8	8.4e-13	33.82	Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25...	[more]
Q9SL15	4.9e-05	52.75	Glycine-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=GRP3 PE=1 SV=1	[more]

BLAST of Carg08912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESY4	4.0e-143	98.26	RNA-binding protein FUS-like OS=Cucurbita moschata OX=3662 GN=LOC111437292 PE=4 ...	[more]
A0A6J1K4E2	2.1e-139	94.58	keratin, type I cytoskeletal 9-like OS=Cucurbita maxima OX=3661 GN=LOC111491084 ...	[more]
A0A5A7VGR8	6.0e-123	90.78	Protein FAM98A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BYB0	6.0e-123	90.78	protein FAM98A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494907 PE=4 SV=1	[more]
A0A6J1HIE0	1.9e-121	89.40	protein FAM98A isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111463892 PE=4 SV=...	[more]

BLAST of Carg08912 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07030.1	2.4e-47	48.72	Alba DNA/RNA-binding protein	[more]
AT1G76010.1	1.3e-40	47.75	Alba DNA/RNA-binding protein	[more]
AT1G20220.1	5.9e-38	45.74	Alba DNA/RNA-binding protein	[more]
AT2G05520.1	3.5e-06	52.75	glycine-rich protein 3	[more]
AT2G05520.2	8.6e-05	55.70	glycine-rich protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 19..77 e-value: 2.1E-16 score: 59.5
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 15..117 e-value: 1.4E-32 score: 113.6
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..283
None	No IPR available	PANTHER	PTHR13516:SF3	ALBA DNA/RNA-BINDING PROTEIN	coord: 1..282
None	No IPR available	PANTHER	PTHR13516	RIBONUCLEASE P SUBUNIT P25	coord: 1..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08912-RA	Carg08912-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding