Carg08197 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08197
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S6
Location	Carg_Chr05: 2617532 .. 2619715 (-)
RNA-Seq Expression	Carg08197
Synteny	Carg08197

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATAGGCGCTGCTTTTAAAACCCTAAACTGTAAGGCGTTGCTCGCTCTCTCGCTGGTTCGTCTCTTTTCTGCGGCCGCCTCTACGACAATCCCAGCGCTCGAAGATGAAGGTTCGGTCCTTAGATGCATCTTCTTCCTCGCTGTTTTCTTTATTTTCTATGCAATGCTAACGTTGTCTTCCCATATATTCAGTTCAATATCGCGAATCCGACGACTGGATGCCAGAAGAAGCTCGAAATCGATGACGACCAGAAACTGTTAGCTTTCAAATCCTTCAGTTTTTCAATTTGTTGTTTTAATCTCGAATGTGCATTCTATTTGATTCATATACTAAGTCCTGCTGGAACTAGGGTTTTTGAAATATATAGTAAATATTTGGGTTCCATTTTGCTAAAGCGTTAATTCGATATATTTTCCGTGTAAATTTTTATGTTATTGTTCAGCATGCTACGGAGTACTTCCTTTTGGTTTTTAGAAATTCAGCTGTAGTTATTTTGTCGTTATTTGTTTTTAGCATTCCCAGTATGTCTTCCCCCGTTTGTTTAGGCAAAGCAACAGTTCCCCGAGCAACAAAATTTTATAAATTATAAATGTCCGAAAAGAAAAATTTTAGCCATTCCTTTTTCGCTTGTACATATATTTTTCGTCATATTTATCATACTTTTGTGTTTATAATGGACTAAAATTATCCTGTCTTTGTTTAGCCGTGCCTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTAGGGGAGGTATGTGTTCTCTTCTGTCATCCAATTAATGCAGTCTTATAGCTGCTGTGGCTAAGTGTTCTGATTGATTATTTCCCCCTTTTCAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTCTTGACCCCTGGCCGTGTTCGTCTCTTGCTACACAGAGGTTTGTTGAAATTTTTATGCTATTGATTGGTCAACCAATTTAATCAAAATTTGTGGTCTACATTTATTTATTTTCAGTAATTTATAGCACACTATCCTAATTAATGTATGTATTACTTTTGTGGCCAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAACGTAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAGGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCAAAAAGAGCATCCAAGATCCGCAAGCTTTTCAATCTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAAGCTGGTATGATTTACTATTGTTTGTTTTTTGTGTGGGTTTTCTAAATCTGTCTTAGAAGATTAAGTTGTTGTTTGTGGGGTTGTTTTTGGTTGGAGGTCGGTTGGAGAGATTTAGAGGGTTTGTGATTTTCCAACTGTGCTTGTGATTTTTTAAAATAAAGGGTCTGAGGTTAAATACTTTTTTTTTTAATTTTTTTTTTATAAAGTTGTCAAGGTATTACAATGGTTAGTATAGTTCTTTGCACGCCTTGATGGATTATGCTTAATTAATCTGGATTTGGCCCTGTCTTGTTTTGGCTCTGAACAGACTATTGTTCATACAAATTGTTTTTTCAGTTCCATTCATTCTGGATTCAAGTTTATGATGGTTTTTATTTGATTGGTGTCAGGCAAAAAGGTTAGCAAGGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGTGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCTGAGGCTGCTGAGTACCAAAAGCTCCTTGCCTCCAGGTTGAAGGAACAAAGAGAACGTCGCAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCCGCTGCTTCAAAGCCGTCCATTGCTGCTTAGTTCGTTCGCGCATTATTTATGTGGTCAGGGTTCTGTTATCTTTTATATTTGCCATCATCTTGTTTTGCTTTTAAAAGGATCCACTTTTTTGAGGCTGCTTGCATGACATCTCGAATGTTTTGATATTTTTGTTTCCTAATTGACAGTTATTTCTAGACATACTTCATATTTTTATGATATGATAGATGAGAGGAGTTTTG

mRNA sequence

CTCATAGGCGCTGCTTTTAAAACCCTAAACTGTAAGGCGTTGCTCGCTCTCTCGCTGGTTCGTCTCTTTTCTGCGGCCGCCTCTACGACAATCCCAGCGCTCGAAGATGAAGTTCAATATCGCGAATCCGACGACTGGATGCCAGAAGAAGCTCGAAATCGATGACGACCAGAAACTCCGTGCCTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTAGGGGAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTCTTGACCCCTGGCCGTGTTCGTCTCTTGCTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAACGTAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAGGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCAAAAAGAGCATCCAAGATCCGCAAGCTTTTCAATCTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAAGCTGGCAAAAAGGTTAGCAAGGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGTGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCTGAGGCTGCTGAGTACCAAAAGCTCCTTGCCTCCAGGTTGAAGGAACAAAGAGAACGTCGCAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCCGCTGCTTCAAAGCCGTCCATTGCTGCTTAGTTCGTTCGCGCATTATTTATGTGGTCAGGGTTCTGTTATCTTTTATATTTGCCATCATCTTGTTTTGCTTTTAAAAGGATCCACTTTTTTGAGGCTGCTTGCATGACATCTCGAATGTTTTGATATTTTTGTTTCCTAATTGACAGTTATTTCTAGACATACTTCATATTTTTATGATATGATAGATGAGAGGAGTTTTG

Coding sequence (CDS)

ATGAAGTTCAATATCGCGAATCCGACGACTGGATGCCAGAAGAAGCTCGAAATCGATGACGACCAGAAACTCCGTGCCTTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTAGGGGAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTCTTGACCCCTGGCCGTGTTCGTCTCTTGCTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAACGTAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAGGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGAATGAGGGGTCCAAAAAGAGCATCCAAGATCCGCAAGCTTTTCAATCTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAAGCTGGCAAAAAGGTTAGCAAGGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGTGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCTGAGGCTGCTGAGTACCAAAAGCTCCTTGCCTCCAGGTTGAAGGAACAAAGAGAACGTCGCAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCCGCTGCTTCAAAGCCGTCCATTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

Homology

[Close]

BLAST of Carg08197 vs. NCBI nr
Match: XP_022962357.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG6598696.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029638.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 3.2e-130
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg08197 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.2 bits (1219), Expect = 7.1e-130
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg08197 vs. NCBI nr
Match: KAA0065138.1 (40S ribosomal protein S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-130
Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]

BLAST of Carg08197 vs. NCBI nr
Match: XP_022997249.1 (40S ribosomal protein S6-like [Cucurbita maxima])

HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
            ASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]

BLAST of Carg08197 vs. NCBI nr
Match: XP_004133785.1 (40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_010258 [Cucumis sativus])

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg08197 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-123
Identity = 229/243 (94.24%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIAEKKKR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AAS 244
           AA+
Sbjct: 241 AAA 243

[Close]

BLAST of Carg08197 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 434.9 bits (1117), Expect = 6.2e-121
Identity = 225/249 (90.36%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]

BLAST of Carg08197 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-120
Identity = 225/250 (90.00%), Postives = 238/250 (95.20%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]

BLAST of Carg08197 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 318.9 bits (816), Expect = 5.0e-86
Identity = 178/204 (87.25%), Postives = 185/204 (90.69%), Query Frame = 0


Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRS 165
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 166 FTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQR 225
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 226 ERRSESLAKKRSRLSAASKPSIAA 250
           E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

[Close]

BLAST of Carg08197 vs. ExPASy Swiss-Prot
Match: P62753 (40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.2e-77
Identity = 159/241 (65.98%), Postives = 190/241 (78.84%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKI
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 181 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 236

Query: 241 A 242
           +
Sbjct: 241 S 236

[Close]

BLAST of Carg08197 vs. ExPASy TrEMBL
Match: A0A6J1HCI6 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg08197 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.4e-130
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg08197 vs. ExPASy TrEMBL
Match: A0A6J1G9P2 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.4e-130
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg08197 vs. ExPASy TrEMBL
Match: A0A6J1KAX8 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111492209 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
            ASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]

BLAST of Carg08197 vs. ExPASy TrEMBL
Match: A0A5A7VBY0 (40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004730 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130
Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]

BLAST of Carg08197 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-122
Identity = 225/249 (90.36%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]

BLAST of Carg08197 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 433.7 bits (1114), Expect = 9.9e-122
Identity = 225/250 (90.00%), Postives = 238/250 (95.20%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]

BLAST of Carg08197 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-87
Identity = 179/249 (71.89%), Postives = 189/249 (75.90%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKK  
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKK-- 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180
                                                             GKKVSKAPKI
Sbjct: 121 --------------------------------------------------GKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 197

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 197

[Close]

BLAST of Carg08197 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-84
Identity = 167/188 (88.83%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDND 122
           MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+ND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKIQR 182
           LPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQR
Sbjct: 61  LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQR 120

Query: 183 LVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SA 242
           LVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL SA
Sbjct: 121 LVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 180

Query: 243 ASKPSIAA 250
           A+KPS+ A
Sbjct: 181 AAKPSVTA 188

The following BLAST results are available for this feature:

BLAST of Carg08197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962357.1	3.2e-130	100.00	40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal...	[more]
XP_022948606.1	7.1e-130	99.60	40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot...	[more]
KAA0065138.1	9.2e-130	99.20	40S ribosomal protein S6-like [Cucumis melo var. makuwa]	[more]
XP_022997249.1	9.2e-130	99.60	40S ribosomal protein S6-like [Cucurbita maxima]	[more]
XP_004133785.1	1.6e-129	99.20	40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_...	[more]

BLAST of Carg08197 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3V8	1.3e-123	94.24	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
P51430	6.2e-121	90.36	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
O48549	1.4e-120	90.00	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
P29345	5.0e-86	87.25	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
P62753	3.2e-77	65.98	40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1	[more]

BLAST of Carg08197 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCI6	1.5e-130	100.00	40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1	[more]
A0A6J1ICI3	3.4e-130	99.60	40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1	[more]
A0A6J1G9P2	3.4e-130	99.60	40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1	[more]
A0A6J1KAX8	4.5e-130	99.60	40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111492209 PE=3 SV=1	[more]
A0A5A7VBY0	4.5e-130	99.20	40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Carg08197 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10360.1	4.4e-122	90.36	Ribosomal protein S6e	[more]
AT4G31700.1	9.9e-122	90.00	ribosomal protein S6	[more]
AT5G10360.2	1.2e-87	71.89	Ribosomal protein S6e	[more]
AT4G31700.2	1.6e-84	88.83	ribosomal protein S6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..216
None	No IPR available	GENE3D	1.20.5.2650		coord: 133..234 e-value: 1.0E-38 score: 133.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..237
None	No IPR available	PANTHER	PTHR11502:SF22	40S RIBOSOMAL PROTEIN S6-LIKE	coord: 1..249
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..128 e-value: 2.0E-81 score: 286.5
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 1..128 e-value: 4.6E-56 score: 188.2
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 1..249
IPR014401	Ribosomal protein S6, eukaryotic	PIRSF	PIRSF002129	RPS6e	coord: 1..249 e-value: 8.0E-119 score: 393.3
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 52..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08197-RA	Carg08197-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome