Carg06334 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06334
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr06: 7789084 .. 7790031 (+)
RNA-Seq Expression	Carg06334
Synteny	Carg06334

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGCAAGAAGCACCAGTTTGACTGCAGCAGTAGCATCGGCGTCTGTGCTTCCTGTTTACGGGAGCGTCTTTTTTTGATTATCGCTGCTCAGGCACAAGCGGAGAAGCAATCGGAGATCCGTGCCGCCGCTTCCGGCGATAATCGTGCGGCGGACGATAGACCTCTTCCGCCACCGCCGCTTGTTTTTCTTCGTTCTGTTTCTCCTTATGATCATCGTTTGAAATCGGATGAAGGTTTGTTGAGCGATCTCGATCGCGAAGGAAATCGCCGCAATCGCCATCAGCGATTTTACAGTACTCCGCAAATCGGACCTGATTACAGAACGAATAACACTGCGAACTCTACATTCGTTACAACAGGTTCGTTCGATCGGAAAAAGAGGAGTAAATTTTCGCTCTGGTCGAAGCTTTTTAAATCTAGATCCGAGAAATTCGAGAAGAAGCATAAAAGTCCTTCTCACGAATCGCACGGTTCTGATTCGGCTTCTTTATCGCCGTCGTGGTTCTCGACGATCTTGAACGGCCGTCGGATTAAGCAGCAATCGAGCCTTGCGACAGTCGAGGAATCGATCGCTGGTGCCGAACGGAGGCATCATTGTCAAACGATTAAACGCGGAATGTCGCCGGCGATAATATCGGAATCGGATGAAGAAGAGTGCGAAAGTCACGGTCGTTCTCCAATTTCTCAGAAGTTTCAACAATCTCCAATGACGATTCCTGGATCGGCTAAACGAGAGAAATTAGGGCACAAACAGAACGTTTCAGGATTCGCATTTTGTTTGAGTCCTCTGGTACGAGCAAGTCCCAACCGGAATTGGAATCAGAAGGTAATGCCGCCGGAAGTTTCTTTCTCCGGCAATCTTAGGGTTCCGGGGAAGCCTCATCTCTGTGCGAATCGGTCGAGGAAGATAGCGGACTTTGGAAGAGTCAATCACAACCGTTGA

mRNA sequence

ATGAGGTGCAAGAAGCACCAGTTTGACTGCAGCAGTAGCATCGGCGTCTGTGCTTCCTGTTTACGGGAGCGTCTTTTTTTGATTATCGCTGCTCAGGCACAAGCGGAGAAGCAATCGGAGATCCGTGCCGCCGCTTCCGGCGATAATCGTGCGGCGGACGATAGACCTCTTCCGCCACCGCCGCTTGTTTTTCTTCGTTCTGTTTCTCCTTATGATCATCGTTTGAAATCGGATGAAGGTTTGTTGAGCGATCTCGATCGCGAAGGAAATCGCCGCAATCGCCATCAGCGATTTTACAGTACTCCGCAAATCGGACCTGATTACAGAACGAATAACACTGCGAACTCTACATTCGTTACAACAGGTTCGTTCGATCGGAAAAAGAGGAGTAAATTTTCGCTCTGGTCGAAGCTTTTTAAATCTAGATCCGAGAAATTCGAGAAGAAGCATAAAAGTCCTTCTCACGAATCGCACGGTTCTGATTCGGCTTCTTTATCGCCGTCGTGGTTCTCGACGATCTTGAACGGCCGTCGGATTAAGCAGCAATCGAGCCTTGCGACAGTCGAGGAATCGATCGCTGGTGCCGAACGGAGGCATCATTGTCAAACGATTAAACGCGGAATGTCGCCGGCGATAATATCGGAATCGGATGAAGAAGAGTGCGAAAGTCACGGTCGTTCTCCAATTTCTCAGAAGTTTCAACAATCTCCAATGACGATTCCTGGATCGGCTAAACGAGAGAAATTAGGGCACAAACAGAACGTTTCAGGATTCGCATTTTGTTTGAGTCCTCTGGTACGAGCAAGTCCCAACCGGAATTGGAATCAGAAGGTAATGCCGCCGGAAGTTTCTTTCTCCGGCAATCTTAGGGTTCCGGGGAAGCCTCATCTCTGTGCGAATCGGTCGAGGAAGATAGCGGACTTTGGAAGAGTCAATCACAACCGTTGA

Coding sequence (CDS)

ATGAGGTGCAAGAAGCACCAGTTTGACTGCAGCAGTAGCATCGGCGTCTGTGCTTCCTGTTTACGGGAGCGTCTTTTTTTGATTATCGCTGCTCAGGCACAAGCGGAGAAGCAATCGGAGATCCGTGCCGCCGCTTCCGGCGATAATCGTGCGGCGGACGATAGACCTCTTCCGCCACCGCCGCTTGTTTTTCTTCGTTCTGTTTCTCCTTATGATCATCGTTTGAAATCGGATGAAGGTTTGTTGAGCGATCTCGATCGCGAAGGAAATCGCCGCAATCGCCATCAGCGATTTTACAGTACTCCGCAAATCGGACCTGATTACAGAACGAATAACACTGCGAACTCTACATTCGTTACAACAGGTTCGTTCGATCGGAAAAAGAGGAGTAAATTTTCGCTCTGGTCGAAGCTTTTTAAATCTAGATCCGAGAAATTCGAGAAGAAGCATAAAAGTCCTTCTCACGAATCGCACGGTTCTGATTCGGCTTCTTTATCGCCGTCGTGGTTCTCGACGATCTTGAACGGCCGTCGGATTAAGCAGCAATCGAGCCTTGCGACAGTCGAGGAATCGATCGCTGGTGCCGAACGGAGGCATCATTGTCAAACGATTAAACGCGGAATGTCGCCGGCGATAATATCGGAATCGGATGAAGAAGAGTGCGAAAGTCACGGTCGTTCTCCAATTTCTCAGAAGTTTCAACAATCTCCAATGACGATTCCTGGATCGGCTAAACGAGAGAAATTAGGGCACAAACAGAACGTTTCAGGATTCGCATTTTGTTTGAGTCCTCTGGTACGAGCAAGTCCCAACCGGAATTGGAATCAGAAGGTAATGCCGCCGGAAGTTTCTTTCTCCGGCAATCTTAGGGTTCCGGGGAAGCCTCATCTCTGTGCGAATCGGTCGAGGAAGATAGCGGACTTTGGAAGAGTCAATCACAACCGTTGA

Protein sequence

MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPPPLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVTTGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCANRSRKIADFGRVNHNR

Homology

[Close]

BLAST of Carg06334 vs. NCBI nr
Match: KAG6597247.1 (hypothetical protein SDJN03_10427, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028716.1 hypothetical protein SDJN02_09897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 627.5 bits (1617), Expect = 6.3e-176
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 315

[Close]

BLAST of Carg06334 vs. NCBI nr
Match: XP_022974739.1 (uncharacterized protein LOC111473474 [Cucurbita maxima] >XP_022975245.1 uncharacterized protein LOC111474358 [Cucurbita maxima])

HSP 1 Score: 622.1 bits (1603), Expect = 2.7e-174
Identity = 312/315 (99.05%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAA+GDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHC+TIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCETIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVM PEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMSPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 315

[Close]

BLAST of Carg06334 vs. NCBI nr
Match: XP_023539051.1 (uncharacterized protein LOC111799804 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.5 bits (1599), Expect = 7.7e-174
Identity = 311/315 (98.73%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAA SGDNRAA+DRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAVSGDNRAAEDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESH SDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHASDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHCQTI+RGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCQTIQRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 315

[Close]

BLAST of Carg06334 vs. NCBI nr
Match: XP_023539052.1 (uncharacterized protein LOC111799804 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.4 bits (1596), Expect = 1.7e-173
Identity = 311/315 (98.73%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAA SGDNRAA+DRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAVSGDNRAAEDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESH SDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHASDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHCQT KRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCQTNKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 315

[Close]

BLAST of Carg06334 vs. NCBI nr
Match: XP_022942680.1 (uncharacterized protein LOC111447641 [Cucurbita moschata])

HSP 1 Score: 612.1 bits (1577), Expect = 2.7e-171
Identity = 309/315 (98.10%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAA+GDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSP+DHRLKSDEGLLSDLDREG   NRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPFDHRLKSDEGLLSDLDREG---NRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKV+PPEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 312

[Close]

BLAST of Carg06334 vs. ExPASy TrEMBL
Match: A0A6J1IG75 (uncharacterized protein LOC111473474 OS=Cucurbita maxima OX=3661 GN=LOC111474358 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 312/315 (99.05%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAA+GDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHC+TIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCETIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVM PEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMSPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 315

[Close]

BLAST of Carg06334 vs. ExPASy TrEMBL
Match: A0A6J1FWR4 (uncharacterized protein LOC111447641 OS=Cucurbita moschata OX=3662 GN=LOC111447641 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 1.3e-171
Identity = 309/315 (98.10%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAA+GDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSP+DHRLKSDEGLLSDLDREG   NRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPFDHRLKSDEGLLSDLDREG---NRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKV+PPEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 316
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 312

[Close]

BLAST of Carg06334 vs. ExPASy TrEMBL
Match: A0A5D3D3J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003230 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.8e-121
Identity = 241/317 (76.03%), Postives = 268/317 (84.54%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEK-QSEIRAAASGDNRAADDRPLPP 60
           MRCKKH  D +S++GVCASCLRERL  IIAAQAQAEK QS++    SG  R+ADD PL P
Sbjct: 1   MRCKKHHSDFTSTVGVCASCLRERLLSIIAAQAQAEKNQSQL---TSGGIRSADD-PL-P 60

Query: 61  PPLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFV 120
           PPL+FL SVSP  H  KS+E L ++LDREGN R+RHQRFYSTPQIGP+ RTNN+AN+TFV
Sbjct: 61  PPLLFLHSVSP--HATKSNEDLWTNLDREGNLRSRHQRFYSTPQIGPNCRTNNSANTTFV 120

Query: 121 TTGSFDRKKRS-KFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRR 180
           TTGSFDRK+RS KFSLWSKLF+SRSEKFEK HKSPS ESHG  S+S SPSWFSTI +GRR
Sbjct: 121 TTGSFDRKQRSKKFSLWSKLFRSRSEKFEKNHKSPSRESHGPGSSSSSPSWFSTIFHGRR 180

Query: 181 IKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPM 240
           IK+QSSL  VEESI  AERR HCQ I+RGMSP  +S+SD EECE   RSPISQKFQ SPM
Sbjct: 181 IKRQSSLTPVEESIPVAERR-HCQAIERGMSPVRVSDSD-EECEGPDRSPISQKFQLSPM 240

Query: 241 TIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLC 300
             PGSAKR +LGH QNVSGFAFCLSPLVRASPNRNWNQKV+PPE +FSGN++VP KPHLC
Sbjct: 241 AAPGSAKRGRLGHNQNVSGFAFCLSPLVRASPNRNWNQKVIPPETAFSGNIKVPAKPHLC 300

Query: 301 ANRSRKIADFGRVNHNR 316
           ANRSRKIADFGRVNHNR
Sbjct: 301 ANRSRKIADFGRVNHNR 308

[Close]

BLAST of Carg06334 vs. ExPASy TrEMBL
Match: A0A1S3AVZ2 (uncharacterized protein LOC103483430 OS=Cucumis melo OX=3656 GN=LOC103483430 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.8e-121
Identity = 241/317 (76.03%), Postives = 268/317 (84.54%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEK-QSEIRAAASGDNRAADDRPLPP 60
           MRCKKH  D +S++GVCASCLRERL  IIAAQAQAEK QS++    SG  R+ADD PL P
Sbjct: 1   MRCKKHHSDFTSTVGVCASCLRERLLSIIAAQAQAEKNQSQL---TSGGIRSADD-PL-P 60

Query: 61  PPLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFV 120
           PPL+FL SVSP  H  KS+E L ++LDREGN R+RHQRFYSTPQIGP+ RTNN+AN+TFV
Sbjct: 61  PPLLFLHSVSP--HATKSNEDLWTNLDREGNLRSRHQRFYSTPQIGPNCRTNNSANTTFV 120

Query: 121 TTGSFDRKKRS-KFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRR 180
           TTGSFDRK+RS KFSLWSKLF+SRSEKFEK HKSPS ESHG  S+S SPSWFSTI +GRR
Sbjct: 121 TTGSFDRKQRSKKFSLWSKLFRSRSEKFEKNHKSPSRESHGPGSSSSSPSWFSTIFHGRR 180

Query: 181 IKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPM 240
           IK+QSSL  VEESI  AERR HCQ I+RGMSP  +S+SD EECE   RSPISQKFQ SPM
Sbjct: 181 IKRQSSLTPVEESIPVAERR-HCQAIERGMSPVRVSDSD-EECEGPDRSPISQKFQLSPM 240

Query: 241 TIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLC 300
             PGSAKR +LGH QNVSGFAFCLSPLVRASPNRNWNQKV+PPE +FSGN++VP KPHLC
Sbjct: 241 AAPGSAKRGRLGHNQNVSGFAFCLSPLVRASPNRNWNQKVIPPETAFSGNIKVPAKPHLC 300

Query: 301 ANRSRKIADFGRVNHNR 316
           ANRSRKIADFGRVNHNR
Sbjct: 301 ANRSRKIADFGRVNHNR 308

[Close]

BLAST of Carg06334 vs. ExPASy TrEMBL
Match: A0A0A0L4I6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128830 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.8e-118
Identity = 235/317 (74.13%), Postives = 264/317 (83.28%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEK-QSEIRAAASGDNRAADDRPLPP 60
           MRCKKH  D +S++GVCASCLRERL  IIAAQAQAEK QS++     G  R+ADD PL P
Sbjct: 1   MRCKKHHSDFTSTVGVCASCLRERLLSIIAAQAQAEKNQSQL---TYGGIRSADD-PL-P 60

Query: 61  PPLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFV 120
           PPL+F+ SVSP  H  KSDE L S+LDREGNRR  HQRFYSTPQIGP+ RTNN+AN+TFV
Sbjct: 61  PPLLFIHSVSP--HATKSDEDLWSNLDREGNRRFLHQRFYSTPQIGPNGRTNNSANTTFV 120

Query: 121 TTGSFDRKKRS-KFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRR 180
           TTGSFDRK+RS KFSLWSKLF+SRS+KFEK HKSPS ESHG  S+S SPSWFSTI +G R
Sbjct: 121 TTGSFDRKQRSKKFSLWSKLFRSRSDKFEKNHKSPSRESHGPGSSSSSPSWFSTIFHGHR 180

Query: 181 IKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPM 240
            K+QSSL+ VEESI+ AERR HC  I+RGMSP  +S+SD EECE   RSPISQKFQ SPM
Sbjct: 181 TKRQSSLSPVEESISVAERR-HCHAIERGMSPVRVSDSD-EECEGPDRSPISQKFQLSPM 240

Query: 241 TIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMPPEVSFSGNLRVPGKPHLC 300
             PGSAKR +LGH QNVSGFAFCLSPL+RASPNRNWNQK +PPE +FSGN++VP KPHLC
Sbjct: 241 AAPGSAKRGRLGHNQNVSGFAFCLSPLMRASPNRNWNQKAIPPETAFSGNIKVPAKPHLC 300

Query: 301 ANRSRKIADFGRVNHNR 316
           ANRSRKIADFGRVNHNR
Sbjct: 301 ANRSRKIADFGRVNHNR 308

[Close]

BLAST of Carg06334 vs. TAIR 10
Match: AT2G44600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 179.9 bits (455), Expect = 3.2e-45
Identity = 131/333 (39.34%), Postives = 184/333 (55.26%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCK+H  D SSSIGVCASCLRERLF +  + A +E         + DN     R + PP
Sbjct: 1   MRCKRHTVDFSSSIGVCASCLRERLFTLAVSTAASE---------NDDNDHRHSR-ISPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PL+F RSVSPY    KSD G  +      +  + + RF++TPQ+      ++++   F +
Sbjct: 61  PLLFPRSVSPYVAPRKSDAGTGTGAGGRDSVASSNNRFFATPQV---VVQSSSSEKVFES 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGS--DSASLSPSWFSTILNGRR 180
             SF +KK+S  S +S  F++RS+ ++ +  S    +  S   SA+ S SWFS +++ R 
Sbjct: 121 DRSF-KKKKSGLSRFSSFFRTRSDDYDSRRDSCDASTVFSQPSSATTSRSWFSKVISVRS 180

Query: 181 IKQQSSLATVEESIAGAERRHH-------CQTIKRGMSPAIISESDEEECESHGRSPISQ 240
            KQ ++     E +  +E  HH        Q   RGMSPA  S +++E  E    SP   
Sbjct: 181 KKQSTTNTCYIEDLIASESDHHHHNQNRPRQRYCRGMSPAGDSTTNDESVE---ESP--G 240

Query: 241 KFQQSP-MTIPGSAKREKLGHKQNVSGFAFCLSPLVRASPN--RNWNQKVMPPEVSFSGN 300
           + +++P M  PG  K   +G  ++VSG AFCLSPLVRA PN   NW  K  PP+  +SG 
Sbjct: 241 RLRRTPVMGTPGRKKTATIGIGRSVSGMAFCLSPLVRAKPNCSSNWKAK-FPPDFGYSGE 300

Query: 301 LRVPGKPHL------CANRSRKIADFGRVNHNR 316
           L+ P KPHL      C NRS+K+ D GRV+H R
Sbjct: 301 LKSPAKPHLSTAASFCGNRSKKLVDLGRVDHRR 313

[Close]

BLAST of Carg06334 vs. TAIR 10
Match: AT3G60200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 155.2 bits (391), Expect = 8.6e-38
Identity = 130/337 (38.58%), Postives = 179/337 (53.12%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAASGDNRAADDRPLPPP 60
           MRCK+H  D SSS GVCASCLRERL  + A+ A +    + ++  S +N         PP
Sbjct: 1   MRCKRHTVDLSSSNGVCASCLRERLLSLAASAAVSAAVEDNQSKKSNNNN-------HPP 60

Query: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIG------PDYRTNNTA 120
            L+F RSVSPY  R KSD G         + R    RF +TPQI        D+ +N + 
Sbjct: 61  LLIFPRSVSPYVTRRKSDAGAGGGDPLVSSNR----RFITTPQIDLVGYSCKDFESNRSN 120

Query: 121 NSTFVTTGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPS------HESHGSDSASLSPS 180
            S          K+  K S +S LF++RSE F+   KS +        S  S S+S S S
Sbjct: 121 KS----------KQGKKVSRFSNLFRARSEDFDTNPKSNNPRFSSCDASEISSSSSSSRS 180

Query: 181 WFSTILN-GRRIKQQSSLATVEESIAGAE-RRHHCQTIKRGMSPAIISESDEEECESHGR 240
           W STIL+ GRR KQ ++   +E+ IA    +R +C    RGMSP   +E  E+  ES   
Sbjct: 181 WISTILSTGRRKKQPTTACYIEDVIAARRPQRIYC----RGMSPVRDTE-PEQSAES--- 240

Query: 241 SPISQKFQQSPMTIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKV-MPPEVSF 300
               ++ +++P T     ++  +G  +++SG AFCLSPLVRASPN  + +K+  P E   
Sbjct: 241 ---IEELRRTPATKTPGRRKIAMGIGKSMSGMAFCLSPLVRASPNCPFKRKMRFPSEFGN 300

Query: 301 SGNL-RVPGKPHL------CANRSRKIADFGRVNHNR 316
           SG +  VP KPH+      CANRS+K+ D GRV+  R
Sbjct: 301 SGEVTAVPEKPHISAAASFCANRSKKLVDLGRVDRRR 305

The following BLAST results are available for this feature:

BLAST of Carg06334 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597247.1	6.3e-176	100.00	hypothetical protein SDJN03_10427, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022974739.1	2.7e-174	99.05	uncharacterized protein LOC111473474 [Cucurbita maxima] >XP_022975245.1 uncharac...	[more]
XP_023539051.1	7.7e-174	98.73	uncharacterized protein LOC111799804 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023539052.1	1.7e-173	98.73	uncharacterized protein LOC111799804 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022942680.1	2.7e-171	98.10	uncharacterized protein LOC111447641 [Cucurbita moschata]	[more]

BLAST of Carg06334 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg06334 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG75	1.3e-174	99.05	uncharacterized protein LOC111473474 OS=Cucurbita maxima OX=3661 GN=LOC111474358...	[more]
A0A6J1FWR4	1.3e-171	98.10	uncharacterized protein LOC111447641 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A5D3D3J1	2.8e-121	76.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AVZ2	2.8e-121	76.03	uncharacterized protein LOC103483430 OS=Cucumis melo OX=3656 GN=LOC103483430 PE=...	[more]
A0A0A0L4I6	3.8e-118	74.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128830 PE=4 SV=1	[more]

BLAST of Carg06334 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44600.1	3.2e-45	39.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G60200.1	8.6e-38	38.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..241
None	No IPR available	PANTHER	PTHR35486	EXPRESSED PROTEIN	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06334-RA	Carg06334-RA	mRNA