Carg04953 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04953
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr08: 634914 .. 637523 (+)
RNA-Seq Expression	Carg04953
Synteny	Carg04953

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACATCCAAGTTCTCACATGCTTCCTCTATTGATCGTTCGAAGAATCCAGTTTTTTTCCCGCCATTATTCTTCAAGTCTGCACGTAGTTCCAATTTCTCCCCAACTCTCCAAACTGACAAAGAAATCATGCATCGAATATCTCCGGAACTGCAAATCCTTGGATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATCGGTCTCGAACGGGACAGGGACACCACCAACAAATTGATGGCATTTTGTGCGGATCCATCTGTTGGAAACTTGCGCTACACAGAGAGGATGTTCGATTACATACAAGGTCCATCTCTGTTTGTTTATAATGTGATGGTTAAAGCGTATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCGTTTGTTCTAAAAGCCATTGGTTGCTTAAGGGATGCGAGGAAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAAACGGGAATGGTTTGTGATACTTATGTTTGTAATTCACTTATGGATATGTATGCGGAATTGGGCAAGGTTGGGAATGCCAAGAAGCTGTTCGACGAAATGCCGAGGAGAGATTCTGTTTCTTGGAATGTTTTGATTTCTGGGTATGTTAGGTGTAGGAGATTTGAGGATGCTGTTAATGTATTTAAGGAAATGCAGCAAGAAAGCAATGAGAAACCTGGTGAAGCTACTGTTGTTAGCACTCTTTCTGCCTGTACAGCTCTGAAAAATCTGGAGCTGGGGGCGGGAATTCACAACTATGTTAGAAAGCAGCTTGGTTTTACCACTATAATCAATAATGCATTGTTGGATATGTACGCAAAATGTGGGTGTTTAGATATTGCCCGCAAGATATTTGATGAAATGCCAATGAGAAATGTGATTTGTTGGACCAGCATGATTTCTAGCTATATTAACTGTGGTGATTTAACAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCAATGATTAATGGGTATGTGCAGTTCAACCATTTTGATGAGGCTGTGGCCTTGTTTCGCGAAATGCAATTTCAAAAGGTAAAGCCAGATAAGTTCACGGTAGTCGCTCTTCTTACGGGCTGTGCGCAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATCTAGTTGAGAACAGAATAACAATGGATACTGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGATGTGTGGATAAATCTTTAGAAATTTTCTATCAGTTGGAGGAGAAGGACACGACATCGTGGACATCGATGATTTGCGGTCTTGCCATGAATGGGGAGACCGGTGAAGCGCTTAGGCTGTTCACAGAAATGGAACTCGAGGGAGCTAAGCCTGATGATATCACCTTCATTGGTGTTCTGAGTGCCTGTAGTCATGGTGGATTGGTAGAGGAAGGACGTCGGTATTTCAACTCGATGAAAACGGTTTATCGAATTGAGCCAAAGGTAGAACACTATGGGTGTGTTATCGACCTCCTTGGTCGAGCGGGGCGGTTGGATGAAGCGGAGGAACTGATACGAGAGATTCCCAGTGAAAATGATGCAATTCTGATTCCTCTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCATAATAATGTTGACATGGGCGAAAGATTAGCCAAAAAACTAGTGAACATAGAATCATGTGATTCTAGCATTCACACACTTCTTGCGAATATATATGCTTTTGCCCACAGGTGGGAAGATGCAAAGGAAGTGAGAAGGAAAATGAAAGAGCTTGGAGTTAAGAAGATGCCTGGATGTAGTTCGATCGAGGTCGATGGCATCGTTCACGAGTTTCTTGTTGGGGATCCATCTCATCCAGAAATGGTGGAAATATGCTCCATGTTGGATAGCGTGGTTGGACCATTACTGGGACCAAAGGAATCCGAGCTTGAAACTGTGATACCACTTCACATTGATGGCACTGTTGTGTTGCATCCATTACATGAGGCTGACAAAGTTTCTTGATTATCTTCTATGGGGTTCCAAATTTGCCAATGCACTCGGGAAACAGTTTTTTGAAGCGTTCGATGTAGGCTTGACCAAACATATGACCTATCGAGAGATGTCGAGAGATGATTGAGGAGTTTCAAATTTGCCAATGCAGTTAGGGAACAGTTCTCTGAGGTGTTCCATGTAGGCTTTGTTAGGAATCACCAATCTCCACATTGGTATGATATTGTCCATTTTGAGCATAAGCTCTAATGGCTTCGCTTTAGGCTTTCCCAAAAGGCTTTATACCAATGAAGATGTATTCCTTGCTTATAAACCCATGATCATTCCCTAAATTAACCAACGTAGGACTCTCTCCCAACAATCCTCAACAAGGCTTGACCAAACATATGGCTTGTCGACAGATGATTGAGGAGTTTCAAATTTGCCAATGTAGTCTGGGAACAGTTTTTTCAGGAGTTCGATGTAGGCTTGACCAAACCATATGACCTGTTGAAAGATGATCGAGGAGTTTCCAATTTGTCAGCGCAGTCTGGAAACAGCTTTGTGAGGAGTTCGATGTAG

mRNA sequence

ATGGGACATCCAAGTTCTCACATGCTTCCTCTATTGATCGTTCGAAGAATCCAGTTTTTTTCCCGCCATTATTCTTCAAGTCTGCACGTAGTTCCAATTTCTCCCCAACTCTCCAAACTGACAAAGAAATCATGCATCGAATATCTCCGGAACTGCAAATCCTTGGATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATCGGTCTCGAACGGGACAGGGACACCACCAACAAATTGATGGCATTTTGTGCGGATCCATCTGTTGGAAACTTGCGCTACACAGAGAGGATGTTCGATTACATACAAGGTCCATCTCTGTTTGTTTATAATGTGATGGTTAAAGCGTATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCGTTTGTTCTAAAAGCCATTGGTTGCTTAAGGGATGCGAGGAAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAAACGGGAATGGTTTGTGATACTTATGTTTGTAATTCACTTATGGATATGTATGCGGAATTGGGCAAGGTTGGGAATGCCAAGAAGCTGTTCGACGAAATGCCGAGGAGAGATTCTGTTTCTTGGAATGTTTTGATTTCTGGGTATGTTAGGTGTAGGAGATTTGAGGATGCTGTTAATGTATTTAAGGAAATGCAGCAAGAAAGCAATGAGAAACCTGGTGAAGCTACTGTTGTTAGCACTCTTTCTGCCTGTACAGCTCTGAAAAATCTGGAGCTGGGGGCGGGAATTCACAACTATGTTAGAAAGCAGCTTGGTTTTACCACTATAATCAATAATGCATTGTTGGATATGTACGCAAAATGTGGGTGTTTAGATATTGCCCGCAAGATATTTGATGAAATGCCAATGAGAAATGTGATTTGTTGGACCAGCATGATTTCTAGCTATATTAACTGTGGTGATTTAACAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCAATGATTAATGGGTATGTGCAGTTCAACCATTTTGATGAGGCTGTGGCCTTGTTTCGCGAAATGCAATTTCAAAAGGTAAAGCCAGATAAGTTCACGGTAGTCGCTCTTCTTACGGGCTGTGCGCAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATCTAGTTGAGAACAGAATAACAATGGATACTGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGATGTGTGGATAAATCTTTAGAAATTTTCTATCAGTTGGAGGAGAAGGACACGACATCGTGGACATCGATGATTTGCGGTCTTGCCATGAATGGGGAGACCGGTGAAGCGCTTAGGCTGTTCACAGAAATGGAACTCGAGGGAGCTAAGCCTGATGATATCACCTTCATTGGTGTTCTGAGTGCCTGTAGTCATGGTGGATTGGTAGAGGAAGGACGTCGGTATTTCAACTCGATGAAAACGGTTTATCGAATTGAGCCAAAGGTAGAACACTATGGGTGTGTTATCGACCTCCTTGGTCGAGCGGGGCGGTTGGATGAAGCGGAGGAACTGATACGAGAGATTCCCAGTGAAAATGATGCAATTCTGATTCCTCTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCATAATAATGTTGACATGGGCGAAAGATTAGCCAAAAAACTAGTGAACATAGAATCATGTGATTCTAGCATTCACACACTTCTTGCGAATATATATGCTTTTGCCCACAGGTGGGAAGATGCAAAGGAAGTGAGAAGGAAAATGAAAGAGCTTGGAGTTAAGAAGATGCCTGGATGTAGTTCGATCGAGGTCGATGGCATCGTTCACGAGTTTCTTGTTGGGGATCCATCTCATCCAGAAATGGTGGAAATATGCTCCATGTTGGATAGCGTGGTTGGACCATTACTGGGACCAAAGGAATCCGAGCTTGAAACTGTGATACCACTTCACATTGATGGCACTGTTGTGTTGCATCCATTACATGAGGCTGACAAAGCTTTGTTAGGAATCACCAATCTCCACATTGGTATGATATTGTCCATTTTGAGCATAAGCTCTAATGGCTTCGCTTTAGGCTTTCCCAAAAGGCTTTATACCAATGAAGATGAGTTCGATGTAGGCTTGACCAAACCATATGACCTGTTGAAAGATGATCGAGGAGTTTCCAATTTGTCAGCGCAGTCTGGAAACAGCTTTGTGAGGAGTTCGATGTAG

Coding sequence (CDS)

ATGGGACATCCAAGTTCTCACATGCTTCCTCTATTGATCGTTCGAAGAATCCAGTTTTTTTCCCGCCATTATTCTTCAAGTCTGCACGTAGTTCCAATTTCTCCCCAACTCTCCAAACTGACAAAGAAATCATGCATCGAATATCTCCGGAACTGCAAATCCTTGGATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATCGGTCTCGAACGGGACAGGGACACCACCAACAAATTGATGGCATTTTGTGCGGATCCATCTGTTGGAAACTTGCGCTACACAGAGAGGATGTTCGATTACATACAAGGTCCATCTCTGTTTGTTTATAATGTGATGGTTAAAGCGTATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCGTTTGTTCTAAAAGCCATTGGTTGCTTAAGGGATGCGAGGAAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAAACGGGAATGGTTTGTGATACTTATGTTTGTAATTCACTTATGGATATGTATGCGGAATTGGGCAAGGTTGGGAATGCCAAGAAGCTGTTCGACGAAATGCCGAGGAGAGATTCTGTTTCTTGGAATGTTTTGATTTCTGGGTATGTTAGGTGTAGGAGATTTGAGGATGCTGTTAATGTATTTAAGGAAATGCAGCAAGAAAGCAATGAGAAACCTGGTGAAGCTACTGTTGTTAGCACTCTTTCTGCCTGTACAGCTCTGAAAAATCTGGAGCTGGGGGCGGGAATTCACAACTATGTTAGAAAGCAGCTTGGTTTTACCACTATAATCAATAATGCATTGTTGGATATGTACGCAAAATGTGGGTGTTTAGATATTGCCCGCAAGATATTTGATGAAATGCCAATGAGAAATGTGATTTGTTGGACCAGCATGATTTCTAGCTATATTAACTGTGGTGATTTAACAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCAATGATTAATGGGTATGTGCAGTTCAACCATTTTGATGAGGCTGTGGCCTTGTTTCGCGAAATGCAATTTCAAAAGGTAAAGCCAGATAAGTTCACGGTAGTCGCTCTTCTTACGGGCTGTGCGCAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATCTAGTTGAGAACAGAATAACAATGGATACTGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGATGTGTGGATAAATCTTTAGAAATTTTCTATCAGTTGGAGGAGAAGGACACGACATCGTGGACATCGATGATTTGCGGTCTTGCCATGAATGGGGAGACCGGTGAAGCGCTTAGGCTGTTCACAGAAATGGAACTCGAGGGAGCTAAGCCTGATGATATCACCTTCATTGGTGTTCTGAGTGCCTGTAGTCATGGTGGATTGGTAGAGGAAGGACGTCGGTATTTCAACTCGATGAAAACGGTTTATCGAATTGAGCCAAAGGTAGAACACTATGGGTGTGTTATCGACCTCCTTGGTCGAGCGGGGCGGTTGGATGAAGCGGAGGAACTGATACGAGAGATTCCCAGTGAAAATGATGCAATTCTGATTCCTCTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCATAATAATGTTGACATGGGCGAAAGATTAGCCAAAAAACTAGTGAACATAGAATCATGTGATTCTAGCATTCACACACTTCTTGCGAATATATATGCTTTTGCCCACAGGTGGGAAGATGCAAAGGAAGTGAGAAGGAAAATGAAAGAGCTTGGAGTTAAGAAGATGCCTGGATGTAGTTCGATCGAGGTCGATGGCATCGTTCACGAGTTTCTTGTTGGGGATCCATCTCATCCAGAAATGGTGGAAATATGCTCCATGTTGGATAGCGTGGTTGGACCATTACTGGGACCAAAGGAATCCGAGCTTGAAACTGTGATACCACTTCACATTGATGGCACTGTTGTGTTGCATCCATTACATGAGGCTGACAAAGCTTTGTTAGGAATCACCAATCTCCACATTGGTATGATATTGTCCATTTTGAGCATAAGCTCTAATGGCTTCGCTTTAGGCTTTCCCAAAAGGCTTTATACCAATGAAGATGAGTTCGATGTAGGCTTGACCAAACCATATGACCTGTTGAAAGATGATCGAGGAGTTTCCAATTTGTCAGCGCAGTCTGGAAACAGCTTTGTGAGGAGTTCGATGTAG

Protein sequence

MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESELETVIPLHIDGTVVLHPLHEADKALLGITNLHIGMILSILSISSNGFALGFPKRLYTNEDEFDVGLTKPYDLLKDDRGVSNLSAQSGNSFVRSSM

Homology

[Close]

BLAST of Carg04953 vs. NCBI nr
Match: KAG7025324.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1540.0 bits (3986), Expect = 0.0e+00
Identity = 756/756 (100.00%), Postives = 756/756 (100.00%), Query Frame = 0


Query: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60
           MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240
           NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300
           KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI
Sbjct: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420
           ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480
           SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540
           GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600
           ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660
           KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660

Query: 661 ELETVIPLHIDGTVVLHPLHEADKALLGITNLHIGMILSILSISSNGFALGFPKRLYTNE 720
           ELETVIPLHIDGTVVLHPLHEADKALLGITNLHIGMILSILSISSNGFALGFPKRLYTNE
Sbjct: 661 ELETVIPLHIDGTVVLHPLHEADKALLGITNLHIGMILSILSISSNGFALGFPKRLYTNE 720

Query: 721 DEFDVGLTKPYDLLKDDRGVSNLSAQSGNSFVRSSM 757
           DEFDVGLTKPYDLLKDDRGVSNLSAQSGNSFVRSSM
Sbjct: 721 DEFDVGLTKPYDLLKDDRGVSNLSAQSGNSFVRSSM 756

[Close]

BLAST of Carg04953 vs. NCBI nr
Match: XP_022960435.1 (pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960436.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960437.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960438.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata])

HSP 1 Score: 1392.5 bits (3603), Expect = 0.0e+00
Identity = 679/684 (99.27%), Postives = 681/684 (99.56%), Query Frame = 0


Query: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60
           MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPIS QLSKLTKKSCIEYLRNCKS+DQLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISSQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240
           NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300
           KPGEATVVSTLSACTALKNLELG  IHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI
Sbjct: 241 KPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420
           ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480
           SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540
           GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAG+LDEAEELIREIPS
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGQLDEAEELIREIPS 540

Query: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600
           ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660
           KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660

Query: 661 ELETVIPLHIDGTVVLHPLHEADK 685
           ELETVIPLHIDGTVVLHPLHEADK
Sbjct: 661 ELETVIPLHIDGTVVLHPLHEADK 684

[Close]

BLAST of Carg04953 vs. NCBI nr
Match: XP_023513900.1 (pentatricopeptide repeat-containing protein At1g31430 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513902.1 pentatricopeptide repeat-containing protein At1g31430 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1387.9 bits (3591), Expect = 0.0e+00
Identity = 676/684 (98.83%), Postives = 680/684 (99.42%), Query Frame = 0


Query: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60
           MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTE+MFDYIQGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTEKMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180
           G FRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC
Sbjct: 121 GSFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240
           NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300
           KPGEATVVSTLSACTALKNLELG  IHNYVRK+LGFTTIINNALLDMYAKCGCLDIARKI
Sbjct: 241 KPGEATVVSTLSACTALKNLELGVEIHNYVRKELGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420
           ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480
           SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540
           GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600
           EN+AILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA
Sbjct: 541 ENNAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660
           KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLDSVVGPLLGPKES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPLLGPKES 660

Query: 661 ELETVIPLHIDGTVVLHPLHEADK 685
           ELE VIPLHIDGTVVLHPLHEADK
Sbjct: 661 ELEIVIPLHIDGTVVLHPLHEADK 684

[Close]

BLAST of Carg04953 vs. NCBI nr
Match: KAG6592918.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1381.3 bits (3574), Expect = 0.0e+00
Identity = 675/677 (99.70%), Postives = 675/677 (99.70%), Query Frame = 0


Query: 8   MLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFR 67
           MLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFR
Sbjct: 1   MLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFR 60

Query: 68  IGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFRKVL 127
           IGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFRKVL
Sbjct: 61  IGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFRKVL 120

Query: 128 LLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMY 187
           LLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMY
Sbjct: 121 LLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMY 180

Query: 188 AELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATV 247
           AELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATV
Sbjct: 181 AELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATV 240

Query: 248 VSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMR 307
           VSTLSACTALKNLELG  IHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMR
Sbjct: 241 VSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMR 300

Query: 308 NVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 367
           NVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ
Sbjct: 301 NVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 360

Query: 368 FQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVD 427
           FQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVD
Sbjct: 361 FQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVD 420

Query: 428 KSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACS 487
           KSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACS
Sbjct: 421 KSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACS 480

Query: 488 HGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILI 547
           HGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILI
Sbjct: 481 HGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILI 540

Query: 548 PLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKM 607
           PLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKM
Sbjct: 541 PLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKM 600

Query: 608 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESELETVIP 667
           KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESELETVIP
Sbjct: 601 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESELETVIP 660

Query: 668 LHIDGTVVLHPLHEADK 685
           LHIDGTVVLHPLHEADK
Sbjct: 661 LHIDGTVVLHPLHEADK 677

[Close]

BLAST of Carg04953 vs. NCBI nr
Match: XP_023004947.1 (pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004948.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004949.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004950.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima])

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 671/684 (98.10%), Postives = 677/684 (98.98%), Query Frame = 0


Query: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60
           M HPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKS+DQLKQ
Sbjct: 1   MRHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGL+RDRDTTNKLMAFCADPSVGNL YTERMFDYIQGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLDRDRDTTNKLMAFCADPSVGNLHYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240
           NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300
           KPGEATVVSTLSACTALKNL LG  IHNYVRK+LGFTTIINNALLDMYAKCGCLDIARKI
Sbjct: 241 KPGEATVVSTLSACTALKNLALGVEIHNYVRKELGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420
           ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480
           SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL+LFTEMELEGAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALKLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540
           GVLSACSHGGLVEEGRRYF+SMKTVYRIEPKVEHYGC IDLLGRAGRLDEAEELIREIPS
Sbjct: 481 GVLSACSHGGLVEEGRRYFDSMKTVYRIEPKVEHYGCAIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600
           ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660
           KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLDSVVGPLLGPKES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPLLGPKES 660

Query: 661 ELETVIPLHIDGTVVLHPLHEADK 685
           ELE VIPLHIDGTVVLHPLHEADK
Sbjct: 661 ELEIVIPLHIDGTVVLHPLHEADK 684

[Close]

BLAST of Carg04953 vs. ExPASy Swiss-Prot
Match: Q9C866 (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E55 PE=2 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 5.6e-197
Identity = 333/565 (58.94%), Postives = 423/565 (74.87%), Query Frame = 0


Query: 102 IQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKG 161
           +Q PSL +YN M+K+ A    F KVL LF  LR   L+PDNFT P VLK+IG LR   +G
Sbjct: 6   LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65

Query: 162 EKVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRC 221
           EKVHG+ VK G+  D+YV NSLM MYA LGK+    K+FDEMP+RD VSWN LIS YV  
Sbjct: 66  EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125

Query: 222 RRFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIIN 281
            RFEDA+ VFK M QESN K  E T+VSTLSAC+ALKNLE+G  I+ +V  +   +  I 
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185

Query: 282 NALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVV 341
           NAL+DM+ KCGCLD AR +FD M  +NV CWTSM+  Y++ G + EAR LF+RSPV+DVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245

Query: 342 LWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYL 401
           LWTAM+NGYVQFN FDEA+ LFR MQ   ++PD F +V+LLTGCAQ GALEQGKWIHGY+
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305

Query: 402 VENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL 461
            ENR+T+D VVGTAL++MY+KCGC++ +LE+FY+++E+DT SWTS+I GLAMNG +G AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365

Query: 462 RLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDL 521
            L+ EME  G + D ITF+ VL+AC+HGG V EGR+ F+SM   + ++PK EH  C+IDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425

Query: 522 LGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDS 581
           L RAG LDEAEELI ++  E+D  L+P+Y +LLSA R + NV + ER+A+KL  +E  DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485

Query: 582 SIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDP--SHPE 641
           S HTLLA++YA A+RWED   VRRKMK+LG++K PGCSSIE+DG+ HEF+VGD   SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545

Query: 642 MVEICSMLDSVVGPLLGPKESELET 665
           M EI SML      +L  +  E+++
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKEIDS 570

[Close]

BLAST of Carg04953 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.2e-145
Identity = 258/606 (42.57%), Postives = 394/606 (65.02%), Query Frame = 0


Query: 46  IEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGP 105
           +  L  CK L  LKQIQ+Q+   GL  D   +++L+AFCA      L Y+ ++   I+ P
Sbjct: 57  LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLF-QRLRED--ELWPDNFTYPFVLKAIGCLRDARKGE 165
           ++F +NV ++ +++    ++  LL+ Q LR    E  PD+FTYP + K    LR +  G 
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176

Query: 166 KVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCR 225
            + G V+K  +   ++V N+ + M+A  G + NA+K+FDE P RD VSWN LI+GY +  
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236

Query: 226 RFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQ-LGFTTIIN 285
             E A+ V+K M+ E   KP + T++  +S+C+ L +L  G   + YV++  L  T  + 
Sbjct: 237 EAEKAIYVYKLMESE-GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 296

Query: 286 NALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVV 345
           NAL+DM++KCG +  AR+IFD +  R ++ WT+MIS Y  CG L  +R LFD    +DVV
Sbjct: 297 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 356

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYL 405
           LW AMI G VQ     +A+ALF+EMQ    KPD+ T++  L+ C+QLGAL+ G WIH Y+
Sbjct: 357 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 416

Query: 406 VENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL 465
            +  ++++  +GT+L++MY+KCG + ++L +F+ ++ +++ ++T++I GLA++G+   A+
Sbjct: 417 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 476

Query: 466 RLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDL 525
             F EM   G  PD+ITFIG+LSAC HGG+++ GR YF+ MK+ + + P+++HY  ++DL
Sbjct: 477 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 536

Query: 526 LGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDS 585
           LGRAG L+EA+ L+  +P E DA    ++GALL  CR+H NV++GE+ AKKL+ ++  DS
Sbjct: 537 LGRAGLLEEADRLMESMPMEADA---AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 596

Query: 586 SIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMV 645
            I+ LL  +Y  A+ WEDAK  RR M E GV+K+PGCSSIEV+GIV EF+V D S PE  
Sbjct: 597 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 656

Query: 646 EICSML 648
           +I   L
Sbjct: 657 KIYDRL 658

[Close]

BLAST of Carg04953 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 503.8 bits (1296), Expect = 3.3e-141
Identity = 248/609 (40.72%), Postives = 396/609 (65.02%), Query Frame = 0


Query: 46  IEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGP 105
           I  L  CK+ DQ KQ+ SQ    G+  +     KL  F      G++ Y  ++F  I  P
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARK---GE 165
            + V+N M+K ++K     + + L+  + ++ + PD+ T+PF+L   G  RD      G+
Sbjct: 98  DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKRDGGALACGK 157

Query: 166 KVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCR 225
           K+H  VVK G+  + YV N+L+ MY+  G +  A+ +FD   + D  SWN++ISGY R +
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217

Query: 226 RFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTI-IN 285
            +E+++ +  EM++ +   P   T++  LSAC+ +K+ +L   +H YV +     ++ + 
Sbjct: 218 EYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 277

Query: 286 NALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVV 345
           NAL++ YA CG +DIA +IF  M  R+VI WTS++  Y+  G+L  AR  FD+ PVRD +
Sbjct: 278 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 337

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYL 405
            WT MI+GY++   F+E++ +FREMQ   + PD+FT+V++LT CA LG+LE G+WI  Y+
Sbjct: 338 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 397

Query: 406 VENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL 465
            +N+I  D VVG ALI+MY KCGC +K+ ++F+ ++++D  +WT+M+ GLA NG+  EA+
Sbjct: 398 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 457

Query: 466 RLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDL 525
           ++F +M+    +PDDIT++GVLSAC+H G+V++ R++F  M++ +RIEP + HYGC++D+
Sbjct: 458 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 517

Query: 526 LGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDS 585
           LGRAG + EA E++R++P   ++I   ++GALL A R+HN+  M E  AKK++ +E  + 
Sbjct: 518 LGRAGLVKEAYEILRKMPMNPNSI---VWGALLGASRLHNDEPMAELAAKKILELEPDNG 577

Query: 586 SIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMV 645
           +++ LL NIYA   RW+D +EVRRK+ ++ +KK PG S IEV+G  HEF+ GD SH +  
Sbjct: 578 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 637

Query: 646 EICSMLDSV 651
           EI   L+ +
Sbjct: 638 EIYMKLEEL 640

[Close]

BLAST of Carg04953 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 9.7e-133
Identity = 243/668 (36.38%), Postives = 392/668 (58.68%), Query Frame = 0


Query: 46  IEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGP 105
           I  +  C SL QLKQ    + R G   D  + +KL A  A  S  +L Y  ++FD I  P
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 106 SLFVYNVMVKAYAK-RGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKV 165
           + F +N +++AYA        +      + E + +P+ +T+PF++KA   +     G+ +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 166 HGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRF 225
           HG  VK+ +  D +V NSL+  Y   G + +A K+F  +  +D VSWN +I+G+V+    
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 226 EDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRK-QLGFTTIINNA 285
           + A+ +FK+M+ E + K    T+V  LSAC  ++NLE G  + +Y+ + ++     + NA
Sbjct: 214 DKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 273

Query: 286 LLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLW 345
           +LDMY KCG ++ A+++FD M  ++ + WT+M+  Y    D   AR++ +  P +D+V W
Sbjct: 274 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 333

Query: 346 TAMINGYVQFNHFDEAVALFREMQFQK-VKPDKFTVVALLTGCAQLGALEQGKWIHGYLV 405
            A+I+ Y Q    +EA+ +F E+Q QK +K ++ T+V+ L+ CAQ+GALE G+WIH Y+ 
Sbjct: 334 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 393

Query: 406 ENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALR 465
           ++ I M+  V +ALI MYSKCG ++KS E+F  +E++D   W++MI GLAM+G   EA+ 
Sbjct: 394 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 453

Query: 466 LFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLL 525
           +F +M+    KP+ +TF  V  ACSH GLV+E    F+ M++ Y I P+ +HY C++D+L
Sbjct: 454 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 513

Query: 526 GRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSS 585
           GR+G L++A + I  +P         ++GALL AC+IH N+++ E    +L+ +E  +  
Sbjct: 514 GRSGYLEKAVKFIEAMPIPPST---SVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 573

Query: 586 IHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVE 645
            H LL+NIYA   +WE+  E+R+ M+  G+KK PGCSSIE+DG++HEFL GD +HP   +
Sbjct: 574 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 633

Query: 646 ICSMLDSVVGPL--------------LGPKESELETVIPLHIDGTVVLHPL--HEADKAL 695
           +   L  V+  L              +  +E   E  + LH +   + + L   EA K +
Sbjct: 634 VYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVI 693

[Close]

BLAST of Carg04953 vs. ExPASy Swiss-Prot
Match: O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.2e-127
Identity = 231/628 (36.78%), Postives = 371/628 (59.08%), Query Frame = 0


Query: 33  ISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVG-- 92
           + P ++     + +E L  CKSL+ +KQ+ + I R  +       +KL +F  + SV   
Sbjct: 3   LPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVI------NHKLNSFLFNLSVSSS 62

Query: 93  --NLRYTERMFDYIQG-PSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPF 152
             NL Y   +F  I   P   V+N  ++  ++    R  +L +QR+R      D F++  
Sbjct: 63  SINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLP 122

Query: 153 VLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRD 212
           +LKA+  +    +G ++HG   K   +CD +V    MDMYA  G++  A+ +FDEM  RD
Sbjct: 123 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 182

Query: 213 SVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIH 272
            V+WN +I  Y R    ++A  +F+EM ++SN  P E  + + +SAC    N+     I+
Sbjct: 183 VVTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 242

Query: 273 NY-VRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLT 332
            + +   +   T +  AL+ MYA  GC+D+AR+ F +M +RN+   T+M+S Y  CG L 
Sbjct: 243 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 302

Query: 333 EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCA 392
           +A+ +FD++  +D+V WT MI+ YV+ ++  EA+ +F EM    +KPD  ++ ++++ CA
Sbjct: 303 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 362

Query: 393 QLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTS 452
            LG L++ KW+H  +  N +  +  +  ALI MY+KCG +D + ++F ++  ++  SW+S
Sbjct: 363 NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 422

Query: 453 MICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVY 512
           MI  L+M+GE  +AL LF  M+ E  +P+++TF+GVL  CSH GLVEEG++ F SM   Y
Sbjct: 423 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 482

Query: 513 RIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMG 572
            I PK+EHYGC++DL GRA  L EA E+I  +P  ++ +   ++G+L+SACRIH  +++G
Sbjct: 483 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV---IWGSLMSACRIHGELELG 542

Query: 573 ERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGI 632
           +  AK+++ +E        L++NIYA   RWED + +RR M+E  V K  G S I+ +G 
Sbjct: 543 KFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGK 602

Query: 633 VHEFLVGDPSHPEMVEICSMLDSVVGPL 655
            HEFL+GD  H +  EI + LD VV  L
Sbjct: 603 SHEFLIGDKRHKQSNEIYAKLDEVVSKL 620

[Close]

BLAST of Carg04953 vs. ExPASy TrEMBL
Match: A0A6J1H7E9 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita moschata OX=3662 GN=LOC111461170 PE=4 SV=1)

HSP 1 Score: 1392.5 bits (3603), Expect = 0.0e+00
Identity = 679/684 (99.27%), Postives = 681/684 (99.56%), Query Frame = 0


Query: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60
           MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPIS QLSKLTKKSCIEYLRNCKS+DQLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISSQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240
           NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300
           KPGEATVVSTLSACTALKNLELG  IHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI
Sbjct: 241 KPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420
           ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480
           SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540
           GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAG+LDEAEELIREIPS
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGQLDEAEELIREIPS 540

Query: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600
           ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660
           KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660

Query: 661 ELETVIPLHIDGTVVLHPLHEADK 685
           ELETVIPLHIDGTVVLHPLHEADK
Sbjct: 661 ELETVIPLHIDGTVVLHPLHEADK 684

[Close]

BLAST of Carg04953 vs. ExPASy TrEMBL
Match: A0A6J1KW17 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita maxima OX=3661 GN=LOC111498101 PE=4 SV=1)

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 671/684 (98.10%), Postives = 677/684 (98.98%), Query Frame = 0


Query: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60
           M HPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKS+DQLKQ
Sbjct: 1   MRHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGL+RDRDTTNKLMAFCADPSVGNL YTERMFDYIQGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLDRDRDTTNKLMAFCADPSVGNLHYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240
           NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300
           KPGEATVVSTLSACTALKNL LG  IHNYVRK+LGFTTIINNALLDMYAKCGCLDIARKI
Sbjct: 241 KPGEATVVSTLSACTALKNLALGVEIHNYVRKELGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420
           ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480
           SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL+LFTEMELEGAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALKLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540
           GVLSACSHGGLVEEGRRYF+SMKTVYRIEPKVEHYGC IDLLGRAGRLDEAEELIREIPS
Sbjct: 481 GVLSACSHGGLVEEGRRYFDSMKTVYRIEPKVEHYGCAIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600
           ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660
           KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLDSVVGPLLGPKES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPLLGPKES 660

Query: 661 ELETVIPLHIDGTVVLHPLHEADK 685
           ELE VIPLHIDGTVVLHPLHEADK
Sbjct: 661 ELEIVIPLHIDGTVVLHPLHEADK 684

[Close]

BLAST of Carg04953 vs. ExPASy TrEMBL
Match: A0A6J1CTE5 (pentatricopeptide repeat-containing protein At1g31430 OS=Momordica charantia OX=3673 GN=LOC111014415 PE=4 SV=1)

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 571/666 (85.74%), Postives = 609/666 (91.44%), Query Frame = 0


Query: 8   MLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFR 67
           MLPL IVRRI+  SRH+SS+LH VPIS    KLTKKSCI+YLRNCKS+DQ KQIQ+ IFR
Sbjct: 1   MLPLSIVRRIELISRHFSSTLHSVPISSCSCKLTKKSCIQYLRNCKSMDQFKQIQTHIFR 60

Query: 68  IGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFRKVL 127
           IGLE+DRDT NK MAFCADPS+GNLRY ER+FDYIQ P LFVYNVMVKAYAKRGIFRKV+
Sbjct: 61  IGLEQDRDTLNKSMAFCADPSLGNLRYAERVFDYIQEPCLFVYNVMVKAYAKRGIFRKVI 120

Query: 128 LLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMY 187
           LLFQRL+ED LWPDNFTYPFVLKAIGCLRD   GEK+HGFVVKTGM  D YVCNSLMDMY
Sbjct: 121 LLFQRLKEDGLWPDNFTYPFVLKAIGCLRDLCHGEKIHGFVVKTGMDFDNYVCNSLMDMY 180

Query: 188 AELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATV 247
           AELGK+  A+KLFDEM  +DSVSWNVLISGYVRCRRFEDA+N FKEMQ+ESN KPGEA +
Sbjct: 181 AELGKIEYAEKLFDEMHTKDSVSWNVLISGYVRCRRFEDAINTFKEMQRESNVKPGEAGI 240

Query: 248 VSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMR 307
           VSTLSACTALKNLELG  IHNYVR +LGFTTIINNALLDMYAKCG L+IARK+FDEMPM+
Sbjct: 241 VSTLSACTALKNLELGEEIHNYVRNELGFTTIINNALLDMYAKCGRLNIARKVFDEMPMK 300

Query: 308 NVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 367
           NVICWTSMIS YINCGDL EARDLFD SPVRDVVLWTAMINGYVQFNHFDEAVALFR+MQ
Sbjct: 301 NVICWTSMISGYINCGDLKEARDLFDISPVRDVVLWTAMINGYVQFNHFDEAVALFRKMQ 360

Query: 368 FQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVD 427
            QKVKPDKFTVVALLTGCAQLGALEQGKW+HGYL ENRITMD VVGTALIEMYSKCGCV+
Sbjct: 361 IQKVKPDKFTVVALLTGCAQLGALEQGKWMHGYLDENRITMDAVVGTALIEMYSKCGCVN 420

Query: 428 KSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACS 487
           KSLEIFY+LEEKDT SWTS+ICGLAMNG+TGEALRLF+EMEL GAKPDDITFIGVLSACS
Sbjct: 421 KSLEIFYELEEKDTASWTSIICGLAMNGKTGEALRLFSEMELVGAKPDDITFIGVLSACS 480

Query: 488 HGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILI 547
           HGGLVEEGRR+FN MK VYRIEPKVEHYGCVIDLLGRAG LDEAEELI+EIP+END IL+
Sbjct: 481 HGGLVEEGRRFFNLMKKVYRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDQILV 540

Query: 548 PLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKM 607
           PLYGALLSACRIHNNVDMGERL+KKLVN ESCDSSIHTLLANIYA A RWEDAK+VRRKM
Sbjct: 541 PLYGALLSACRIHNNVDMGERLSKKLVNFESCDSSIHTLLANIYASADRWEDAKKVRRKM 600

Query: 608 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKE--SELETV 667
           KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM+EICSMLD V GPLLG KE   E E V
Sbjct: 601 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVTGPLLGSKEFQFEFERV 660

Query: 668 IPLHID 672
           +PL +D
Sbjct: 661 VPLRLD 666

[Close]

BLAST of Carg04953 vs. ExPASy TrEMBL
Match: A0A0A0LWP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418260 PE=4 SV=1)

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 561/667 (84.11%), Postives = 607/667 (91.00%), Query Frame = 0


Query: 5   SSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQ 64
           SSHMLPL I+RR+QF SRH+SSS H+VP+  ++SKLTKKSCIE LRNCKS+DQLKQIQSQ
Sbjct: 136 SSHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQ 195

Query: 65  IFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFR 124
           IFRIGLE DRDT NKLMAFCAD S+GNLRY E++F+Y+Q PSLFVYNVMVK YAKRGI R
Sbjct: 196 IFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILR 255

Query: 125 KVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLM 184
           KVLLLFQ+LRED LWPD FTYPFVLKAIGCLRD R+GEKV GF+VKTGM  D YV NSL+
Sbjct: 256 KVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLI 315

Query: 185 DMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGE 244
           DMY EL  V NAKKLFDEM  RDSVSWNV+ISGYVRCRRFEDA+N F+EMQQE NEKP E
Sbjct: 316 DMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDE 375

Query: 245 ATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEM 304
           ATVVSTLSACTALKNLELG  IHNYVRK+LGFTT I+NALLDMYAKCGCL+IAR IFDEM
Sbjct: 376 ATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEM 435

Query: 305 PMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFR 364
            M+NVICWTSMIS YINCGDL EARDLFD+SPVRDVVLWTAMINGYVQF+HFD+AVALFR
Sbjct: 436 SMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFR 495

Query: 365 EMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCG 424
           EMQ Q+VKPDKFTVV LLTGCAQLGALEQGKWIHGYL ENRITMD VVGTALIEMYSKCG
Sbjct: 496 EMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCG 555

Query: 425 CVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLS 484
           CVDKSLEIFY+LE+KDT SWTS+ICGLAMNG+T EALRLF+EME  GAKPDDITFIGVLS
Sbjct: 556 CVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLS 615

Query: 485 ACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDA 544
           ACSHGGLVEEGRR+FNSMK V+RIEPKVEHYGCVIDLLGRAG LDEAEELI+EIP EN  
Sbjct: 616 ACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCE 675

Query: 545 ILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVR 604
           I++PLYGALLSACRIHNNVDMGERLAKKL NIESCDSSIHTLLANIYA   RWEDAK+VR
Sbjct: 676 IVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVR 735

Query: 605 RKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESELET 664
           RKMKELGVKKMPGCS IEVDGIVHEFLVGDPSHPEM+EICSML+ V G LLG KES++E+
Sbjct: 736 RKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKESQVES 795

Query: 665 VIPLHID 672
           V+PL+ D
Sbjct: 796 VMPLYKD 802

[Close]

BLAST of Carg04953 vs. ExPASy TrEMBL
Match: A0A5A7TXP7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00060 PE=4 SV=1)

HSP 1 Score: 1140.2 bits (2948), Expect = 0.0e+00
Identity = 552/658 (83.89%), Postives = 598/658 (90.88%), Query Frame = 0


Query: 5   SSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQ 64
           SSHMLPL I+RR+QF SRH+SSS H+V +  ++SK TKKSCIEYLRNCKS++QLK+IQSQ
Sbjct: 55  SSHMLPLSIIRRVQFISRHFSSSPHLVTVPIRISKPTKKSCIEYLRNCKSMEQLKRIQSQ 114

Query: 65  IFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFR 124
           IFRIGLE DRD  NKLMAFCAD S+GNLRY E++FDY+Q PSLFVYNVMVK YAKRG+ R
Sbjct: 115 IFRIGLEGDRDIINKLMAFCADLSLGNLRYAEKIFDYVQDPSLFVYNVMVKMYAKRGLLR 174

Query: 125 KVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLM 184
           KVLLLFQ+LRED+LWPDNFTYPFVLKAIGCLRD  +GEK+HGFVVKTGM  D YVCNSLM
Sbjct: 175 KVLLLFQQLREDQLWPDNFTYPFVLKAIGCLRDVGQGEKLHGFVVKTGMNLDNYVCNSLM 234

Query: 185 DMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGE 244
           DMY+ELG V NAKKLFDEM  RDSVSWNV+ISGYV CRRFEDA+N F+EMQQE NEKP E
Sbjct: 235 DMYSELGNVENAKKLFDEMTTRDSVSWNVMISGYVGCRRFEDAINTFREMQQEGNEKPDE 294

Query: 245 ATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEM 304
           ATVVSTLSACTALKNLELG  IHNYVRK+LGFT  I+NALLDMYAKCGCL+I+R IFDEM
Sbjct: 295 ATVVSTLSACTALKNLELGDEIHNYVRKELGFTPRIDNALLDMYAKCGCLNISRNIFDEM 354

Query: 305 PMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFR 364
           PM+NVICWTSMIS YINCGDL EARDLFD+SPVRDVVLWTAMINGYVQF+HFD+AVALFR
Sbjct: 355 PMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFR 414

Query: 365 EMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCG 424
           EMQ QKVKPDKFTVV LLTGCAQLGALEQGKWIHGYL ENRIT+D VVGTALIEMYSKCG
Sbjct: 415 EMQIQKVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITIDVVVGTALIEMYSKCG 474

Query: 425 CVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLS 484
           CVDKSLEIFY+LE+KDT SWTS+ICGLAMNG+T EALRLF+EMEL GAKPDDITFIGVLS
Sbjct: 475 CVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMELVGAKPDDITFIGVLS 534

Query: 485 ACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDA 544
           ACSHGGLVEEGRR+FNSMK VYRIEPKVEHYGCV+DLLGRAG LDEAEELI+EI  EN  
Sbjct: 535 ACSHGGLVEEGRRFFNSMKKVYRIEPKVEHYGCVVDLLGRAGLLDEAEELIQEISIENCE 594

Query: 545 ILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVR 604
           I++ LYGALLSACRIHNNVDMGERLAKKLVNIE CDSSIH LLANIYA A RWEDAK+VR
Sbjct: 595 IVVSLYGALLSACRIHNNVDMGERLAKKLVNIEPCDSSIHALLANIYASADRWEDAKKVR 654

Query: 605 RKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESEL 663
           RKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPE +EI SML+ V   LLG KES+L
Sbjct: 655 RKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPETIEIRSMLNRVSRQLLGLKESQL 712

[Close]

BLAST of Carg04953 vs. TAIR 10
Match: AT1G31430.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 689.1 bits (1777), Expect = 4.0e-198
Identity = 333/565 (58.94%), Postives = 423/565 (74.87%), Query Frame = 0


Query: 102 IQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKG 161
           +Q PSL +YN M+K+ A    F KVL LF  LR   L+PDNFT P VLK+IG LR   +G
Sbjct: 6   LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65

Query: 162 EKVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRC 221
           EKVHG+ VK G+  D+YV NSLM MYA LGK+    K+FDEMP+RD VSWN LIS YV  
Sbjct: 66  EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125

Query: 222 RRFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIIN 281
            RFEDA+ VFK M QESN K  E T+VSTLSAC+ALKNLE+G  I+ +V  +   +  I 
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185

Query: 282 NALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVV 341
           NAL+DM+ KCGCLD AR +FD M  +NV CWTSM+  Y++ G + EAR LF+RSPV+DVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245

Query: 342 LWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYL 401
           LWTAM+NGYVQFN FDEA+ LFR MQ   ++PD F +V+LLTGCAQ GALEQGKWIHGY+
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305

Query: 402 VENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL 461
            ENR+T+D VVGTAL++MY+KCGC++ +LE+FY+++E+DT SWTS+I GLAMNG +G AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365

Query: 462 RLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDL 521
            L+ EME  G + D ITF+ VL+AC+HGG V EGR+ F+SM   + ++PK EH  C+IDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425

Query: 522 LGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDS 581
           L RAG LDEAEELI ++  E+D  L+P+Y +LLSA R + NV + ER+A+KL  +E  DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485

Query: 582 SIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDP--SHPE 641
           S HTLLA++YA A+RWED   VRRKMK+LG++K PGCSSIE+DG+ HEF+VGD   SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545

Query: 642 MVEICSMLDSVVGPLLGPKESELET 665
           M EI SML      +L  +  E+++
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKEIDS 570

[Close]

BLAST of Carg04953 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 517.7 bits (1332), Expect = 1.6e-146
Identity = 258/606 (42.57%), Postives = 394/606 (65.02%), Query Frame = 0


Query: 46  IEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGP 105
           +  L  CK L  LKQIQ+Q+   GL  D   +++L+AFCA      L Y+ ++   I+ P
Sbjct: 57  LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLF-QRLRED--ELWPDNFTYPFVLKAIGCLRDARKGE 165
           ++F +NV ++ +++    ++  LL+ Q LR    E  PD+FTYP + K    LR +  G 
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176

Query: 166 KVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCR 225
            + G V+K  +   ++V N+ + M+A  G + NA+K+FDE P RD VSWN LI+GY +  
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236

Query: 226 RFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQ-LGFTTIIN 285
             E A+ V+K M+ E   KP + T++  +S+C+ L +L  G   + YV++  L  T  + 
Sbjct: 237 EAEKAIYVYKLMESE-GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 296

Query: 286 NALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVV 345
           NAL+DM++KCG +  AR+IFD +  R ++ WT+MIS Y  CG L  +R LFD    +DVV
Sbjct: 297 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 356

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYL 405
           LW AMI G VQ     +A+ALF+EMQ    KPD+ T++  L+ C+QLGAL+ G WIH Y+
Sbjct: 357 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 416

Query: 406 VENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL 465
            +  ++++  +GT+L++MY+KCG + ++L +F+ ++ +++ ++T++I GLA++G+   A+
Sbjct: 417 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 476

Query: 466 RLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDL 525
             F EM   G  PD+ITFIG+LSAC HGG+++ GR YF+ MK+ + + P+++HY  ++DL
Sbjct: 477 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 536

Query: 526 LGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDS 585
           LGRAG L+EA+ L+  +P E DA    ++GALL  CR+H NV++GE+ AKKL+ ++  DS
Sbjct: 537 LGRAGLLEEADRLMESMPMEADA---AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 596

Query: 586 SIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMV 645
            I+ LL  +Y  A+ WEDAK  RR M E GV+K+PGCSSIEV+GIV EF+V D S PE  
Sbjct: 597 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 656

Query: 646 EICSML 648
           +I   L
Sbjct: 657 KIYDRL 658

[Close]

BLAST of Carg04953 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 503.8 bits (1296), Expect = 2.4e-142
Identity = 248/609 (40.72%), Postives = 396/609 (65.02%), Query Frame = 0


Query: 46  IEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGP 105
           I  L  CK+ DQ KQ+ SQ    G+  +     KL  F      G++ Y  ++F  I  P
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARK---GE 165
            + V+N M+K ++K     + + L+  + ++ + PD+ T+PF+L   G  RD      G+
Sbjct: 98  DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKRDGGALACGK 157

Query: 166 KVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCR 225
           K+H  VVK G+  + YV N+L+ MY+  G +  A+ +FD   + D  SWN++ISGY R +
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217

Query: 226 RFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTI-IN 285
            +E+++ +  EM++ +   P   T++  LSAC+ +K+ +L   +H YV +     ++ + 
Sbjct: 218 EYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 277

Query: 286 NALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVV 345
           NAL++ YA CG +DIA +IF  M  R+VI WTS++  Y+  G+L  AR  FD+ PVRD +
Sbjct: 278 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 337

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYL 405
            WT MI+GY++   F+E++ +FREMQ   + PD+FT+V++LT CA LG+LE G+WI  Y+
Sbjct: 338 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 397

Query: 406 VENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEAL 465
            +N+I  D VVG ALI+MY KCGC +K+ ++F+ ++++D  +WT+M+ GLA NG+  EA+
Sbjct: 398 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 457

Query: 466 RLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDL 525
           ++F +M+    +PDDIT++GVLSAC+H G+V++ R++F  M++ +RIEP + HYGC++D+
Sbjct: 458 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 517

Query: 526 LGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDS 585
           LGRAG + EA E++R++P   ++I   ++GALL A R+HN+  M E  AKK++ +E  + 
Sbjct: 518 LGRAGLVKEAYEILRKMPMNPNSI---VWGALLGASRLHNDEPMAELAAKKILELEPDNG 577

Query: 586 SIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMV 645
           +++ LL NIYA   RW+D +EVRRK+ ++ +KK PG S IEV+G  HEF+ GD SH +  
Sbjct: 578 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 637

Query: 646 EICSMLDSV 651
           EI   L+ +
Sbjct: 638 EIYMKLEEL 640

[Close]

BLAST of Carg04953 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 475.7 bits (1223), Expect = 6.9e-134
Identity = 243/668 (36.38%), Postives = 392/668 (58.68%), Query Frame = 0


Query: 46  IEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGP 105
           I  +  C SL QLKQ    + R G   D  + +KL A  A  S  +L Y  ++FD I  P
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 106 SLFVYNVMVKAYAK-RGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKV 165
           + F +N +++AYA        +      + E + +P+ +T+PF++KA   +     G+ +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 166 HGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRF 225
           HG  VK+ +  D +V NSL+  Y   G + +A K+F  +  +D VSWN +I+G+V+    
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 226 EDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIHNYVRK-QLGFTTIINNA 285
           + A+ +FK+M+ E + K    T+V  LSAC  ++NLE G  + +Y+ + ++     + NA
Sbjct: 214 DKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 273

Query: 286 LLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLW 345
           +LDMY KCG ++ A+++FD M  ++ + WT+M+  Y    D   AR++ +  P +D+V W
Sbjct: 274 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 333

Query: 346 TAMINGYVQFNHFDEAVALFREMQFQK-VKPDKFTVVALLTGCAQLGALEQGKWIHGYLV 405
            A+I+ Y Q    +EA+ +F E+Q QK +K ++ T+V+ L+ CAQ+GALE G+WIH Y+ 
Sbjct: 334 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 393

Query: 406 ENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALR 465
           ++ I M+  V +ALI MYSKCG ++KS E+F  +E++D   W++MI GLAM+G   EA+ 
Sbjct: 394 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 453

Query: 466 LFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLL 525
           +F +M+    KP+ +TF  V  ACSH GLV+E    F+ M++ Y I P+ +HY C++D+L
Sbjct: 454 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 513

Query: 526 GRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSS 585
           GR+G L++A + I  +P         ++GALL AC+IH N+++ E    +L+ +E  +  
Sbjct: 514 GRSGYLEKAVKFIEAMPIPPST---SVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 573

Query: 586 IHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVE 645
            H LL+NIYA   +WE+  E+R+ M+  G+KK PGCSSIE+DG++HEFL GD +HP   +
Sbjct: 574 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 633

Query: 646 ICSMLDSVVGPL--------------LGPKESELETVIPLHIDGTVVLHPL--HEADKAL 695
           +   L  V+  L              +  +E   E  + LH +   + + L   EA K +
Sbjct: 634 VYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVI 693

[Close]

BLAST of Carg04953 vs. TAIR 10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 458.8 bits (1179), Expect = 8.7e-129
Identity = 231/628 (36.78%), Postives = 371/628 (59.08%), Query Frame = 0


Query: 33  ISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVG-- 92
           + P ++     + +E L  CKSL+ +KQ+ + I R  +       +KL +F  + SV   
Sbjct: 3   LPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVI------NHKLNSFLFNLSVSSS 62

Query: 93  --NLRYTERMFDYIQG-PSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPF 152
             NL Y   +F  I   P   V+N  ++  ++    R  +L +QR+R      D F++  
Sbjct: 63  SINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLP 122

Query: 153 VLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMYAELGKVGNAKKLFDEMPRRD 212
           +LKA+  +    +G ++HG   K   +CD +V    MDMYA  G++  A+ +FDEM  RD
Sbjct: 123 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 182

Query: 213 SVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATVVSTLSACTALKNLELGAGIH 272
            V+WN +I  Y R    ++A  +F+EM ++SN  P E  + + +SAC    N+     I+
Sbjct: 183 VVTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 242

Query: 273 NY-VRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMRNVICWTSMISSYINCGDLT 332
            + +   +   T +  AL+ MYA  GC+D+AR+ F +M +RN+   T+M+S Y  CG L 
Sbjct: 243 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 302

Query: 333 EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQFQKVKPDKFTVVALLTGCA 392
           +A+ +FD++  +D+V WT MI+ YV+ ++  EA+ +F EM    +KPD  ++ ++++ CA
Sbjct: 303 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 362

Query: 393 QLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVDKSLEIFYQLEEKDTTSWTS 452
            LG L++ KW+H  +  N +  +  +  ALI MY+KCG +D + ++F ++  ++  SW+S
Sbjct: 363 NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 422

Query: 453 MICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACSHGGLVEEGRRYFNSMKTVY 512
           MI  L+M+GE  +AL LF  M+ E  +P+++TF+GVL  CSH GLVEEG++ F SM   Y
Sbjct: 423 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 482

Query: 513 RIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILIPLYGALLSACRIHNNVDMG 572
            I PK+EHYGC++DL GRA  L EA E+I  +P  ++ +   ++G+L+SACRIH  +++G
Sbjct: 483 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV---IWGSLMSACRIHGELELG 542

Query: 573 ERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKMKELGVKKMPGCSSIEVDGI 632
           +  AK+++ +E        L++NIYA   RWED + +RR M+E  V K  G S I+ +G 
Sbjct: 543 KFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGK 602

Query: 633 VHEFLVGDPSHPEMVEICSMLDSVVGPL 655
            HEFL+GD  H +  EI + LD VV  L
Sbjct: 603 SHEFLIGDKRHKQSNEIYAKLDEVVSKL 620

The following BLAST results are available for this feature:

BLAST of Carg04953 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025324.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022960435.1	0.0e+00	99.27	pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_0...	[more]
XP_023513900.1	0.0e+00	98.83	pentatricopeptide repeat-containing protein At1g31430 isoform X1 [Cucurbita pepo...	[more]
KAG6592918.1	0.0e+00	99.70	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023004947.1	0.0e+00	98.10	pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023...	[more]

BLAST of Carg04953 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C866	5.6e-197	58.94	Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	2.2e-145	42.57	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9LSB8	3.3e-141	40.72	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th...	[more]
O82380	9.7e-133	36.38	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
O23337	1.2e-127	36.78	Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg04953 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7E9	0.0e+00	99.27	pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KW17	0.0e+00	98.10	pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita maxima OX=366...	[more]
A0A6J1CTE5	0.0e+00	85.74	pentatricopeptide repeat-containing protein At1g31430 OS=Momordica charantia OX=...	[more]
A0A0A0LWP8	0.0e+00	84.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418260 PE=4 SV=1	[more]
A0A5A7TXP7	0.0e+00	83.89	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg04953 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31430.1	4.0e-198	58.94	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G22410.1	1.6e-146	42.57	SLOW GROWTH 1	[more]
AT3G15930.1	2.4e-142	40.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	6.9e-134	36.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G14820.1	8.7e-129	36.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 207..254 e-value: 3.4E-9 score: 36.8 coord: 439..487 e-value: 5.1E-9 score: 36.2 coord: 338..386 e-value: 2.8E-13 score: 49.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 179..206 e-value: 8.5E-5 score: 22.6 coord: 109..136 e-value: 0.0032 score: 17.6 coord: 311..334 e-value: 1.9E-4 score: 21.5 coord: 282..308 e-value: 3.8E-4 score: 20.5 coord: 514..541 e-value: 0.0015 score: 18.7 coord: 585..612 e-value: 0.36 score: 11.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 515..540 e-value: 0.0016 score: 16.5 coord: 341..374 e-value: 2.9E-8 score: 31.4 coord: 310..334 e-value: 6.6E-4 score: 17.7 coord: 178..207 e-value: 5.8E-5 score: 21.0 coord: 282..308 e-value: 0.0029 score: 15.7 coord: 209..242 e-value: 1.6E-8 score: 32.2 coord: 109..136 e-value: 7.1E-4 score: 17.6 coord: 443..475 e-value: 4.0E-7 score: 27.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 580..614 score: 8.725252
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 339..373 score: 12.101333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 207..241 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 277..311 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 106..140 score: 10.029647
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 440..474 score: 11.640958
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..206 score: 9.952918
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 34..153 e-value: 6.9E-9 score: 37.5 coord: 266..439 e-value: 3.6E-36 score: 127.1 coord: 440..628 e-value: 8.6E-34 score: 119.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 154..263 e-value: 8.1E-23 score: 82.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 169..334
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 319..604
None	No IPR available	PANTHER	PTHR47928:SF123	OS06G0597500 PROTEIN	coord: 55..653
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 55..653

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04953-RA	Carg04953-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000228	nuclear chromosome
cellular_component	GO:0070603	SWI/SNF superfamily-type complex
molecular_function	GO:0005515	protein binding