Carg03636 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACAAACAGCCCTATTTGAACGCCAACTTCTACGGCCCCACCGTGCCTCCTTCGTCCAAGAGACACCGCGGGCGGCGCGTCCTTTGCACCATTCTGAAGGTGGCGATTGGGTTCATCGTGGGGGTTGGTATTGTATTGTTGATATTAGGGCTTGTGTACCGTCCACATAAGCTTGAGTTCAATGTGACCTCCGCTAAACTCACCCAATTCAACATCACTGCCAATCAGCTCTATTACAACTTGGGTCTTAACGTTACCATCACAAACCCCAACAAGCGCTACCGAGTTTACTACGATACTAACGAAATGGTCGTTCTTTATAAGAACCGGAGGCTTAACAGCCTCTCGCTGCCAGCGTTCTTCCAAGACACCAAGAGCACCGCCGTCCTCAGCCCTAATAACTTTGAGGGTCAACGCCTGATCCTTCTCGCCGGTGATGAAATTGTTGAGTTCAACTCCGAGAAAGCTGAGGGGCAATACCCGATTGATGTCAAGTTCTTTTTCCGGTTAAGGATGAAGTCCGGTGAGGTGGTGTTGAAATTAAAGCCCAAGGTGCACTGTGGATTGAGGGTTCCATTGAGTAATGCTCCCAAGTCTTTTTCTTTTGTTTTCTTTCCCAACCCTGCCTGTGATTTCCAATTCTGATTCATTGGTCGCTTTATGGTATTTATTATTCTTATTCTTATTTTGTAATTTGATTATTTTTAATACAATAAAGATGATTGAGAACTTGAATATGTGGAACAATCTTATGTTCGTCTTAAATTAATTTATCCAAAAAAATATATCAATTTAGGAACACGACTCTCCACAATGGTAATATATTGTCCACTTTGAGCATAAATTCTCATGACTTTACTTTGAGCTTTCCCAGGAGGCCTCATGCCAATGAGACTATTCTTTGTATATAAACTCATGATCATTCCCTAAATTAGCCGATGTAGAACTTTCAACAATCCTCACTCCCCTTCGTTGTAATTCAATTTCCTATCTCTACCAAAAAAATAGATCAGATCTTGTAGTGCGCTGAATGATCATGTGTTTATAAGCAAGAAATTCATGGTACGATGCATTTTGGGAAAGCCTAAAACAAAGTAATGAGAGTTTATGCTGGGAGTGGACAATATCATATGATAGTGGAGATCAATGATTCCTAACCAACCACGTCATCAGTAACGAAGGGGTGGAGATTTCTCCACATAGTGGGATACATGACGATGTCCACCTACCCAAAATGTCAACATATCCTTAATTCCACACTACAAAAAGGCCCCTAGTTTTGGACATTAATTTGAGTTGAAAGATGTAGATTTTATTAGTAAATCAAGTTCTAAAGCTTGTGTGGGGATTGAATTTTTAATGGCCTCAATGAGCTGGTCTTCTCTTGGGATTGAGTTTTTAATCTCCTCCATGAGCTGGTGTCCCAAAAAGTCAACCCAAAACCAAGATTTATGAATAATCTTCCATTCCAAATCCTATTTCTTCCTCCTCCGAACTAATATCCCAAATCAATCCTGTAGAATGGCAAGCTTATGGTGCCTCTTGATCTGCGTTATTGTGGCGCTTGGTGCAACCTTTGGGTTCTCCATCTTCATCTTATGGCTCGTTTTCATAACCCACAAGATCAAATTCTATGTCACAGACGCCACACTCACCCAATTCAACTTCACAAACAACGCCCAACTCCATTACAACCTCGCTCTTTACTTCACTCTCACAAACCCCAACGACCAAGTCGGGATCTTTTACGACACCATCGAAGCAACCGCGATGTATAAAGATCAAAACTTTGACACCAGGTTTCTTACCCCTTTCTACCAAAGCCCAAAAGCCACCAGCTTGATTAGAGCAAGATTTGAAGGCCACCACCTGGTGCCAATCCCCAACCACAAGGTCTCCGAGTTCAATTCTGAAAAACTTGCCGGCGCTTACGCCATTGATCTCAATTTTCGGCTCTCCACAAGGTTGAAATTTGGGGTTTTTAAAATCGTTCGAGAAAAGCTTAAAGTAAGCTGTGGATTCAAGGTTGCGTTGAGTTTTAATGGGAGATCCATTCCTTGGTTTCAGATCATTGCCTGCCATGTCGATTATTGA ATGGCCGACAAACAGCCCTATTTGAACGCCAACTTCTACGGCCCCACCGTGCCTCCTTCGTCCAAGAGACACCGCGGGCGGCGCGTCCTTTGCACCATTCTGAAGGTGGCGATTGGGTTCATCGTGGGGGTTGGTATTGTATTGTTGATATTAGGGCTTGTGTACCGTCCACATAAGCTTGAGTTCAATGTGACCTCCGCTAAACTCACCCAATTCAACATCACTGCCAATCAGCTCTATTACAACTTGGGTCTTAACGTTACCATCACAAACCCCAACAAGCGCTACCGAGTTTACTACGATACTAACGAAATGGTCGTTCTTTATAAGAACCGGAGGCTTAACAGCCTCTCGCTGCCAGCGTTCTTCCAAGACACCAAGAGCACCGCCGTCCTCAGCCCTAATAACTTTGAGGGTCAACGCCTGATCCTTCTCGCCGGTGATGAAATTGTTGAGTTCAACTCCGAGAAAGCTGAGGGGCAATACCCGATTGATGTCAAGTTCTTTTTCCGGTTAAGGATGAAGTCCGGTGAGGTGGTGTTGAAATTAAAGCCCAAGGTGCACTGTGGATTGAGGGTTCCATTGAGTAATGCTCCCAAAATGGCAAGCTTATGGTGCCTCTTGATCTGCGTTATTGTGGCGCTTGGTGCAACCTTTGGGTTCTCCATCTTCATCTTATGGCTCGTTTTCATAACCCACAAGATCAAATTCTATGTCACAGACGCCACACTCACCCAATTCAACTTCACAAACAACGCCCAACTCCATTACAACCTCGCTCTTTACTTCACTCTCACAAACCCCAACGACCAAGTCGGGATCTTTTACGACACCATCGAAGCAACCGCGATGTATAAAGATCAAAACTTTGACACCAGGTTTCTTACCCCTTTCTACCAAAGCCCAAAAGCCACCAGCTTGATTAGAGCAAGATTTGAAGGCCACCACCTGGTGCCAATCCCCAACCACAAGGTCTCCGAGTTCAATTCTGAAAAACTTGCCGGCGCTTACGCCATTGATCTCAATTTTCGGCTCTCCACAAGGTTGAAATTTGGGGTTTTTAAAATCGTTCGAGAAAAGCTTAAAGTAAGCTGTGGATTCAAGGTTGCGTTGAGTTTTAATGGGAGATCCATTCCTTGGTTTCAGATCATTGCCTGCCATGTCGATTATTGA ATGGCCGACAAACAGCCCTATTTGAACGCCAACTTCTACGGCCCCACCGTGCCTCCTTCGTCCAAGAGACACCGCGGGCGGCGCGTCCTTTGCACCATTCTGAAGGTGGCGATTGGGTTCATCGTGGGGGTTGGTATTGTATTGTTGATATTAGGGCTTGTGTACCGTCCACATAAGCTTGAGTTCAATGTGACCTCCGCTAAACTCACCCAATTCAACATCACTGCCAATCAGCTCTATTACAACTTGGGTCTTAACGTTACCATCACAAACCCCAACAAGCGCTACCGAGTTTACTACGATACTAACGAAATGGTCGTTCTTTATAAGAACCGGAGGCTTAACAGCCTCTCGCTGCCAGCGTTCTTCCAAGACACCAAGAGCACCGCCGTCCTCAGCCCTAATAACTTTGAGGGTCAACGCCTGATCCTTCTCGCCGGTGATGAAATTGTTGAGTTCAACTCCGAGAAAGCTGAGGGGCAATACCCGATTGATGTCAAGTTCTTTTTCCGGTTAAGGATGAAGTCCGGTGAGGTGGTGTTGAAATTAAAGCCCAAGGTGCACTGTGGATTGAGGGTTCCATTGAGTAATGCTCCCAAAATGGCAAGCTTATGGTGCCTCTTGATCTGCGTTATTGTGGCGCTTGGTGCAACCTTTGGGTTCTCCATCTTCATCTTATGGCTCGTTTTCATAACCCACAAGATCAAATTCTATGTCACAGACGCCACACTCACCCAATTCAACTTCACAAACAACGCCCAACTCCATTACAACCTCGCTCTTTACTTCACTCTCACAAACCCCAACGACCAAGTCGGGATCTTTTACGACACCATCGAAGCAACCGCGATGTATAAAGATCAAAACTTTGACACCAGGTTTCTTACCCCTTTCTACCAAAGCCCAAAAGCCACCAGCTTGATTAGAGCAAGATTTGAAGGCCACCACCTGGTGCCAATCCCCAACCACAAGGTCTCCGAGTTCAATTCTGAAAAACTTGCCGGCGCTTACGCCATTGATCTCAATTTTCGGCTCTCCACAAGGTTGAAATTTGGGGTTTTTAAAATCGTTCGAGAAAAGCTTAAAGTAAGCTGTGGATTCAAGGTTGCGTTGAGTTTTAATGGGAGATCCATTCCTTGGTTTCAGATCATTGCCTGCCATGTCGATTATTGA MADKQPYLNANFYGPTVPPSSKRHRGRRVLCTILKVAIGFIVGVGIVLLILGLVYRPHKLEFNVTSAKLTQFNITANQLYYNLGLNVTITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLPAFFQDTKSTAVLSPNNFEGQRLILLAGDEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVVLKLKPKVHCGLRVPLSNAPKMASLWCLLICVIVALGATFGFSIFILWLVFITHKIKFYVTDATLTQFNFTNNAQLHYNLALYFTLTNPNDQVGIFYDTIEATAMYKDQNFDTRFLTPFYQSPKATSLIRARFEGHHLVPIPNHKVSEFNSEKLAGAYAIDLNFRLSTRLKFGVFKIVREKLKVSCGFKVALSFNGRSIPWFQIIACHVDY Homology
BLAST of Carg03636 vs. NCBI nr
Match: KAG7017492.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 781.2 bits (2016), Expect = 4.2e-222 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0
BLAST of Carg03636 vs. NCBI nr
Match: XP_022935274.1 (NDR1/HIN1-like protein 10 [Cucurbita moschata]) HSP 1 Score: 400.6 bits (1028), Expect = 1.6e-107 Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Carg03636 vs. NCBI nr
Match: KAG6580740.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 398.7 bits (1023), Expect = 5.9e-107 Identity = 200/203 (98.52%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of Carg03636 vs. NCBI nr
Match: XP_023528863.1 (NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394.8 bits (1013), Expect = 8.5e-106 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Carg03636 vs. NCBI nr
Match: XP_022983103.1 (NDR1/HIN1-like protein 10 [Cucurbita maxima]) HSP 1 Score: 389.8 bits (1000), Expect = 2.7e-104 Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.6e-33 Identity = 88/211 (41.71%), Postives = 128/211 (60.66%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.2e-27 Identity = 67/181 (37.02%), Postives = 98/181 (54.14%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 8.2e-27 Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.5e-15 Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.5e-09 Identity = 46/160 (28.75%), Postives = 76/160 (47.50%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy TrEMBL
Match: A0A6J1F4Y9 (NDR1/HIN1-like protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111442212 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 7.5e-108 Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy TrEMBL
Match: A0A6J1J6T7 (NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111481750 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 1.3e-104 Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy TrEMBL
Match: A0A6J1FA81 (NDR1/HIN1-like protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111442218 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 2.0e-100 Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy TrEMBL
Match: A0A6A1WBD8 (Protein YLS9 OS=Morella rubra OX=262757 GN=CJ030_MR2G007341 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77 Identity = 172/410 (41.95%), Postives = 243/410 (59.27%), Query Frame = 0
BLAST of Carg03636 vs. ExPASy TrEMBL
Match: A0A0A0LB18 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779000 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 4.0e-77 Identity = 152/215 (70.70%), Postives = 177/215 (82.33%), Query Frame = 0
BLAST of Carg03636 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 144.4 bits (363), Expect = 1.9e-34 Identity = 88/211 (41.71%), Postives = 128/211 (60.66%), Query Frame = 0
BLAST of Carg03636 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 ) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-28 Identity = 67/181 (37.02%), Postives = 98/181 (54.14%), Query Frame = 0
BLAST of Carg03636 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 122.9 bits (307), Expect = 5.8e-28 Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 0
HSP 2 Score: 41.6 bits (96), Expect = 1.7e-03 Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 0
BLAST of Carg03636 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-26 Identity = 75/218 (34.40%), Postives = 118/218 (54.13%), Query Frame = 0
BLAST of Carg03636 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative ) HSP 1 Score: 83.6 bits (205), Expect = 3.9e-16 Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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