Carg02468 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCAACTTCTCTCATCTCTTCCTCTTTCTTGCTTTCTTTTTGGTCCCTTCTTGGGTTGTTTCAGGAACCGATCATATGGTGGGGGATGCTCAGGGTTGGGACCTTGGAGTCGACTACTCGTCTTGGACTATTGGCAAAACGTTTTTTGTTGGAGATAATCTAGGTGGATTATTCTCTTCCATCTTTTCTTGTTTTCATCCAAAGTGTACCAAAATAAATAACGGCACGAATAAGAACTTGAGGTGAAAGTTTACTTTGAATTCAAAACCTTAAATAATATTTATCCAATTGTTGTTGTGAATCAAATGAAGCATACATATTATTTATGAACTTTTTTAATTAATAATATAGTGTTTTAATCTATTTTTCAAAATGTAAATTTCATTGGGACAAATTTTGTGGTTTCCTTTTTCTTTTGTTTCTAAAAGATGTGATTTTTTTACAGTATTCAAGTATAAGAAAGGGGTGCACAACGTATTGGACGTCAACGTAACGGCGTTCGCAGAGTGCGCCGCACCTACAAACCAATCCCCGCTGAAAACTGGAAACGATATCATTCCATTGCGACGTCCTGGAACCAGATGGTTCATATGCAGCATTGCCCGCCACTGTCAGTCAGGACAAAAGCTTGTCATTTTCGTAGACAACCCACCGTCCAACGGCGGACAGGCTTCTCCCCCGCCGTCGTCTCTTCCCCTGGCGCCCGTCTCTTCTCCACCGCCGCCATCGACCTCCGCCCCTCCTCCTCCTTCAGCGCCTGCGCCTAGTCAGAACCAAACTACCCCACACTTGCCAGTTCCAACTCCAAGCGAAAGCATCCCACCATCGCAGTCGCCTGTTCCCAGTCCGAGCCCCACTGCTCCACCGCCATCCGGGTCTGCCTCGAAAGCCGCTATTTCCGGGCATCTTGGGGTTTTGGCAGTGGCGGTTGGCGCTCTGGCTGGAATAATGACATAATCATGGATTGAAATTTTGAGTTTTCTATATTGTATGAATGGACCTGCCTCCTGTACTTCTCTTGCAGCTGCATTGCTGCTTATTGTTATTAGAATTTAAATATTTCGGGCTATATTTATTTCGTAAATACACTAAAATAATTCTATTATTTTGATCTTAGAACAACACAAATTCTTCCTTAATCACGATGCCTTCAATGTTAAACTATCAACATTGACGAAACATTATATTTATAACTCTAGATTCAAAATTTAAATTATATATTATATGGAAGATTTAAATTTCTAATAATTAAAAAAAATAATATTTTTAGTAGTGGGTATTGAGCATATTGCATCATGAAGAGGGGGCTTTTCACTGCATTTTTTGTTTTTTAAAGTTATTATGCAATTAATGATATATATATATATCAAATTTGACAAATAAAACACTATAAAGTACTACCTAATATATTTAAATTCAACTATGAATTTAATCCAAACGTCGGCCAGGAAAAATGCTCAAAATCAATAATACAAAATACTCCAATTTAATTAAAAATATGCAACATGGTCATATTTTATTTGTTGCATTTGATAAATTTTATACTCTAAACATCACTTCTAAGATAACGTAATACTTTTTAAAAAATCTTAAAATTTGAGGTCTCTAAATTTACAAAATTAACATTTTTAGTGTTTTAAAATTTAAATGAGACTTATATTTTATCTGTAAATTATCTAAAAACCAATGAAAAAAATTAAATAAAAAAATGCTATCTGTAAGCATATTATAAACTCATAGAGAGGTCGTTCTGATGAAACAATGCATCGTAAGACACAAGCTCTCACACTGCTCTTTGTAAACATCTACAATCAATTTTCTAGGCATTTGCATTGCGCTGGCTTTTGTATCCTTCCGCCAGCCCACGGCCAGCCGTCGAAAACCCTCTTCTTTTTGTATCCTTCCGCCACCCAGGGCCGGCCGCCCATGGCCGGCTCTCCATTCTCCAATCCTCCGCACTCAACAAGCATATCTATAAATACCGACCAACCCAACAACCAGATACTCCCAACTACAGACGCGAGCGAGTTAAAAGCCCAACGAATTCGAGCTCCCTTCGATGGCGATCTCCACCTCTCATCTCTTCGTCTTCCTTTCCATTGCGGCCATTTTCGCCCCTTCCGCTTTGGCCACCAATTACACCGTCGGAGATGATGCTGGTTGGAAGGTTGGCGTCAATTACACCGAGTGGGCTCAGAACAAAACATTCTACGTCGGCGATAATCTTAGTAAGTCATTTTTCAAATATTTTCAGAATATTAATAAACTTAATTTTTGTATCAAAATAACAAATCTTTTATTATTATTATTTTTTTTTTTTCTGAAACAATTAAATAGTTGTCGGATTATTTGTTTTTTCCCCTTGTTTTCAGTTTTCAAATACCCAGCGAAGGATGACAGCGTATATGACGTTACCGGCGGGCAGTTCCACAATTGCACAATACCAACTGACAAAAATGCAACGAACACTGGACACGACGTCGTTTCACTGACTCAGCCTGGAAGAAAATGGTTCATCAGTGGAAAAGAGGGCCACTGTGCAAAAAATCAGAAGCTCGTCATTACGGTCATGGCTATGGCTCCAGCCAGTTCCCCACTTCCCGGCGGATCCAGCTCATCTCCACCGCCTCCGCCGCCGGCACCACCGGCATCGGGAGCCACGAGAGCGGTTATTTCCGGAAAATTTGGGTTGGTCGCCATGGTGGTTGGCATCCTTGGTGTGATGATCGCTTAG ATGCTCAACTTCTCTCATCTCTTCCTCTTTCTTGCTTTCTTTTTGGTCCCTTCTTGGGTTGTTTCAGGAACCGATCATATGGTGGGGGATGCTCAGGGTTGGGACCTTGGAGTCGACTACTCGTCTTGGACTATTGGCAAAACGTTTTTTGTTGGAGATAATCTAGTATTCAAGTATAAGAAAGGGGTGCACAACGTATTGGACGTCAACGTAACGGCGTTCGCAGAGTGCGCCGCACCTACAAACCAATCCCCGCTGAAAACTGGAAACGATATCATTCCATTGCGACGTCCTGGAACCAGATGGTTCATATGCAGCATTGCCCGCCACTGTCAGTCAGGACAAAAGCTTGTCATTTTCGTAGACAACCCACCGTCCAACGGCGGACAGGCTTCTCCCCCGCCGTCGTCTCTTCCCCTGGCGCCCGTCTCTTCTCCACCGCCGCCATCGACCTCCGCCCCTCCTCCTCCTTCAGCGCCTGCGCCTAGTCAGAACCAAACTACCCCACACTTGCCAGTTCCAACTCCAAGCGAAAGCATCCCACCATCGCAGTCGCCTGTTCCCAGTCCGAGCCCCACTGCTCCACCGCCATCCGGGTCTGCCTCGAAAGCCGCTATTTCCGGGCATCTTGGGGTTTTGGCAGTGGCGCTCCCTTCGATGGCGATCTCCACCTCTCATCTCTTCGTCTTCCTTTCCATTGCGGCCATTTTCGCCCCTTCCGCTTTGGCCACCAATTACACCGTCGGAGATGATGCTGGTTGGAAGGTTGGCGTCAATTACACCGAGTGGGCTCAGAACAAAACATTCTACGTCGGCGATAATCTTATTTTCAAATACCCAGCGAAGGATGACAGCGTATATGACGTTACCGGCGGGCAGTTCCACAATTGCACAATACCAACTGACAAAAATGCAACGAACACTGGACACGACGTCGTTTCACTGACTCAGCCTGGAAGAAAATGGTTCATCAGTGGAAAAGAGGGCCACTGTGCAAAAAATCAGAAGCTCGTCATTACGGTCATGGCTATGGCTCCAGCCAGTTCCCCACTTCCCGGCGGATCCAGCTCATCTCCACCGCCTCCGCCGCCGGCACCACCGGCATCGGGAGCCACGAGAGCGGTTATTTCCGGAAAATTTGGGTTGGTCGCCATGGTGGTTGGCATCCTTGGTGTGATGATCGCTTAG ATGCTCAACTTCTCTCATCTCTTCCTCTTTCTTGCTTTCTTTTTGGTCCCTTCTTGGGTTGTTTCAGGAACCGATCATATGGTGGGGGATGCTCAGGGTTGGGACCTTGGAGTCGACTACTCGTCTTGGACTATTGGCAAAACGTTTTTTGTTGGAGATAATCTAGTATTCAAGTATAAGAAAGGGGTGCACAACGTATTGGACGTCAACGTAACGGCGTTCGCAGAGTGCGCCGCACCTACAAACCAATCCCCGCTGAAAACTGGAAACGATATCATTCCATTGCGACGTCCTGGAACCAGATGGTTCATATGCAGCATTGCCCGCCACTGTCAGTCAGGACAAAAGCTTGTCATTTTCGTAGACAACCCACCGTCCAACGGCGGACAGGCTTCTCCCCCGCCGTCGTCTCTTCCCCTGGCGCCCGTCTCTTCTCCACCGCCGCCATCGACCTCCGCCCCTCCTCCTCCTTCAGCGCCTGCGCCTAGTCAGAACCAAACTACCCCACACTTGCCAGTTCCAACTCCAAGCGAAAGCATCCCACCATCGCAGTCGCCTGTTCCCAGTCCGAGCCCCACTGCTCCACCGCCATCCGGGTCTGCCTCGAAAGCCGCTATTTCCGGGCATCTTGGGGTTTTGGCAGTGGCGCTCCCTTCGATGGCGATCTCCACCTCTCATCTCTTCGTCTTCCTTTCCATTGCGGCCATTTTCGCCCCTTCCGCTTTGGCCACCAATTACACCGTCGGAGATGATGCTGGTTGGAAGGTTGGCGTCAATTACACCGAGTGGGCTCAGAACAAAACATTCTACGTCGGCGATAATCTTATTTTCAAATACCCAGCGAAGGATGACAGCGTATATGACGTTACCGGCGGGCAGTTCCACAATTGCACAATACCAACTGACAAAAATGCAACGAACACTGGACACGACGTCGTTTCACTGACTCAGCCTGGAAGAAAATGGTTCATCAGTGGAAAAGAGGGCCACTGTGCAAAAAATCAGAAGCTCGTCATTACGGTCATGGCTATGGCTCCAGCCAGTTCCCCACTTCCCGGCGGATCCAGCTCATCTCCACCGCCTCCGCCGCCGGCACCACCGGCATCGGGAGCCACGAGAGCGGTTATTTCCGGAAAATTTGGGTTGGTCGCCATGGTGGTTGGCATCCTTGGTGTGATGATCGCTTAG MLNFSHLFLFLAFFLVPSWVVSGTDHMVGDAQGWDLGVDYSSWTIGKTFFVGDNLVFKYKKGVHNVLDVNVTAFAECAAPTNQSPLKTGNDIIPLRRPGTRWFICSIARHCQSGQKLVIFVDNPPSNGGQASPPPSSLPLAPVSSPPPPSTSAPPPPSAPAPSQNQTTPHLPVPTPSESIPPSQSPVPSPSPTAPPPSGSASKAAISGHLGVLAVALPSMAISTSHLFVFLSIAAIFAPSALATNYTVGDDAGWKVGVNYTEWAQNKTFYVGDNLIFKYPAKDDSVYDVTGGQFHNCTIPTDKNATNTGHDVVSLTQPGRKWFISGKEGHCAKNQKLVITVMAMAPASSPLPGGSSSSPPPPPPAPPASGATRAVISGKFGLVAMVVGILGVMIA Homology
BLAST of Carg02468 vs. NCBI nr
Match: KAG7036102.1 (hypothetical protein SDJN02_02902, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 766.5 bits (1978), Expect = 1.1e-217 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
BLAST of Carg02468 vs. NCBI nr
Match: KAG6606156.1 (hypothetical protein SDJN03_03473, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 412.9 bits (1060), Expect = 3.1e-111 Identity = 215/221 (97.29%), Postives = 219/221 (99.10%), Query Frame = 0
BLAST of Carg02468 vs. NCBI nr
Match: XP_022996101.1 (cucumber peeling cupredoxin-like [Cucurbita maxima]) HSP 1 Score: 382.9 bits (982), Expect = 3.4e-102 Identity = 205/221 (92.76%), Postives = 210/221 (95.02%), Query Frame = 0
BLAST of Carg02468 vs. NCBI nr
Match: XP_023532970.1 (chemocyanin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362.1 bits (928), Expect = 6.2e-96 Identity = 187/200 (93.50%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of Carg02468 vs. NCBI nr
Match: KAG6606157.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 346.3 bits (887), Expect = 3.5e-91 Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy Swiss-Prot
Match: G7L0H3 (Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.9e-26 Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.2e-26 Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.8e-21 Identity = 58/142 (40.85%), Postives = 77/142 (54.23%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.5e-17 Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15 Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy TrEMBL
Match: A0A6J1K3S1 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111491418 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102 Identity = 205/221 (92.76%), Postives = 210/221 (95.02%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy TrEMBL
Match: A0A6J1H417 (stellacyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111459414 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 6.5e-91 Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy TrEMBL
Match: A0A6J1K0U9 (stellacyanin-like OS=Cucurbita maxima OX=3661 GN=LOC111491375 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 2.5e-82 Identity = 162/180 (90.00%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy TrEMBL
Match: A0A6J1H5E5 (early nodulin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111459746 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76 Identity = 159/165 (96.36%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of Carg02468 vs. ExPASy TrEMBL
Match: A0A0A0KP33 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G157360 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-57 Identity = 136/241 (56.43%), Postives = 173/241 (71.78%), Query Frame = 0
BLAST of Carg02468 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein ) HSP 1 Score: 109.4 bits (272), Expect = 6.8e-24 Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Carg02468 vs. TAIR 10
Match: AT1G45063.1 (copper ion binding;electron carriers ) HSP 1 Score: 107.8 bits (268), Expect = 2.0e-23 Identity = 89/337 (26.41%), Postives = 131/337 (38.87%), Query Frame = 0
BLAST of Carg02468 vs. TAIR 10
Match: AT1G45063.2 (copper ion binding;electron carriers ) HSP 1 Score: 107.8 bits (268), Expect = 2.0e-23 Identity = 89/337 (26.41%), Postives = 131/337 (38.87%), Query Frame = 0
BLAST of Carg02468 vs. TAIR 10
Match: AT3G53330.1 (plastocyanin-like domain-containing protein ) HSP 1 Score: 89.7 bits (221), Expect = 5.5e-18 Identity = 99/336 (29.46%), Postives = 146/336 (43.45%), Query Frame = 0
BLAST of Carg02468 vs. TAIR 10
Match: AT4G31840.1 (early nodulin-like protein 15 ) HSP 1 Score: 89.7 bits (221), Expect = 5.5e-18 Identity = 67/176 (38.07%), Postives = 92/176 (52.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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