Carg02132 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02132
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLOB domain-containing protein 21-like
LocationCarg_Chr15: 843451 .. 843990 (-)
RNA-Seq ExpressionCarg02132
SyntenyCarg02132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGTTGCCATGAGACTCGCTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTCAAGAGAAGATGCACTCCCACATGTATATTTGCGCCTTATTTTCGGTCTGATGAGCCTAAGAAGTTTGCCAAAGTTCATAAGGTTTTTGGGGCCAGTAATGTGAGCAAGATTCTGACTGAGGTGCCCGAGGAGCAGAGAGAGGACACTGTGAACTCCTTGGCTTATGAGGCTGAGGCCAGGCTGAGGGACCCTGTTTATGGCTGCATCGGTGCCATAGCTCTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCCATTGCCAAAGCTCGTCTTGCTCGTTATGCTGATTCTGATCATAATTATAGCACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGGGTGTTTTGGAAAATTGTGTTGTTAATATGCCTTATGGTGGATTGAGCATCGCTGCAGGGCAGAGCTCTTCCGCAATCACCCAATATGGATATTTATGTGACTTCACCCACTTTCCTTATCCATCTAAAGCTTGA

mRNA sequence

ATGAGAGGTTGCCATGAGACTCGCTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTCAAGAGAAGATGCACTCCCACATGTATATTTGCGCCTTATTTTCGGTCTGATGAGCCTAAGAAGTTTGCCAAAGTTCATAAGGTTTTTGGGGCCAGTAATGTGAGCAAGATTCTGACTGAGGTGCCCGAGGAGCAGAGAGAGGACACTGTGAACTCCTTGGCTTATGAGGCTGAGGCCAGGCTGAGGGACCCTGTTTATGGCTGCATCGGTGCCATAGCTCTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCCATTGCCAAAGCTCGTCTTGCTCGTTATGCTGATTCTGATCATAATTATAGCACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGGGTGTTTTGGAAAATTGTGTTGTTAATATGCCTTATGGTGGATTGAGCATCGCTGCAGGGCAGAGCTCTTCCGCAATCACCCAATATGGATATTTATGTGACTTCACCCACTTTCCTTATCCATCTAAAGCTTGA

Coding sequence (CDS)

ATGAGAGGTTGCCATGAGACTCGCTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTCAAGAGAAGATGCACTCCCACATGTATATTTGCGCCTTATTTTCGGTCTGATGAGCCTAAGAAGTTTGCCAAAGTTCATAAGGTTTTTGGGGCCAGTAATGTGAGCAAGATTCTGACTGAGGTGCCCGAGGAGCAGAGAGAGGACACTGTGAACTCCTTGGCTTATGAGGCTGAGGCCAGGCTGAGGGACCCTGTTTATGGCTGCATCGGTGCCATAGCTCTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCCATTGCCAAAGCTCGTCTTGCTCGTTATGCTGATTCTGATCATAATTATAGCACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGGGTGTTTTGGAAAATTGTGTTGTTAATATGCCTTATGGTGGATTGAGCATCGCTGCAGGGCAGAGCTCTTCCGCAATCACCCAATATGGATATTTATGTGACTTCACCCACTTTCCTTATCCATCTAAAGCTTGA

Protein sequence

MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDHNYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA
Homology
BLAST of Carg02132 vs. NCBI nr
Match: XP_022938953.1 (LOB domain-containing protein 21-like [Cucurbita moschata] >KAG7016020.1 LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 180
           NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA
Sbjct: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 179

BLAST of Carg02132 vs. NCBI nr
Match: KAG6578457.1 (LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.8 bits (891), Expect = 5.5e-92
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 95  MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 154

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 155 PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 214

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 180
           NYSTF SSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYP KA
Sbjct: 215 NYSTF-SSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPFKA 272

BLAST of Carg02132 vs. NCBI nr
Match: XP_022993160.1 (LOB domain-containing protein 21-like [Cucurbita maxima] >XP_022993162.1 LOB domain-containing protein 21-like [Cucurbita maxima])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 121 NYSTFSSSSSSS---SSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPS 180
           NY+TFSSSSSSS   SS+GVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYP 
Sbjct: 121 NYNTFSSSSSSSSSPSSLGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPF 180

BLAST of Carg02132 vs. NCBI nr
Match: XP_023549826.1 (LOB domain-containing protein 21-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.0 bits (876), Expect = 3.0e-90
Identity = 175/188 (93.09%), Postives = 178/188 (94.68%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 121 NYSTFSSSSS---------SSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFT 180
           NY++FSSSSS         SSSS+GVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFT
Sbjct: 121 NYNSFSSSSSSSSSSSSSPSSSSLGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFT 180

BLAST of Carg02132 vs. NCBI nr
Match: XP_023549827.1 (LOB domain-containing protein 21-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.9 bits (860), Expect = 2.2e-88
Identity = 169/179 (94.41%), Postives = 172/179 (96.09%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 180
           NY++F      SSS+GVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYP KA
Sbjct: 121 NYNSF------SSSLGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPFKA 173

BLAST of Carg02132 vs. ExPASy Swiss-Prot
Match: Q9SRL8 (LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-45
Identity = 104/158 (65.82%), Postives = 117/158 (74.05%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG HE RSSSSCAACKLLKRRCTPTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL   A S  
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRL--LAHSGV 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSS 159
           N S  S    S      L+     +PY  L +  G ++
Sbjct: 121 NNSQVSPLDDSPELAAFLD----LVPYSDLMLLDGSTN 151

BLAST of Carg02132 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.4e-35
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           SSS CAACK L+R+CT  C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 4   SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDA 63

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Sbjct: 64  VNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

BLAST of Carg02132 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.4e-35
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

BLAST of Carg02132 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-34
Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+CT  C+FAPYF  +EP KFA VH++FGASNVSKIL EV   QRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYA 117
           VNSLAYEAEARL+DPVYGC+GAI++LQ +++ LQ +L    A L RYA
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

BLAST of Carg02132 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33
Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 10  SSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTV 69
           +S CAACK L+R+C P CIFAPYF  +EP KFA VHK+FGASNV+K+L E+   QRED V
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 70  NSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           NSLAYEAEAR+RDPVYGC+GAI+ LQ ++  LQ +L  A A LA Y
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

BLAST of Carg02132 vs. ExPASy TrEMBL
Match: A0A6J1FKB9 (LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111445010 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.8e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 180
           NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA
Sbjct: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 179

BLAST of Carg02132 vs. ExPASy TrEMBL
Match: A0A6J1JS05 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111489259 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 176/182 (96.70%), Postives = 178/182 (97.80%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 121 NYSTFSSSSSSS---SSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPS 180
           NY+TFSSSSSSS   SS+GVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYP 
Sbjct: 121 NYNTFSSSSSSSSSPSSLGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPF 180

BLAST of Carg02132 vs. ExPASy TrEMBL
Match: A0A6J1JJ75 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111487426 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80
Identity = 158/179 (88.27%), Postives = 169/179 (94.41%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCH+TRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKM ELQHDLA+AKARLARYA +++
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 180
           N +T SSSSSSSSS+GVLE+CVVNM YGGLS  +GQSS  I+QYGYLCDFTHFPYP +A
Sbjct: 121 N-NTSSSSSSSSSSLGVLESCVVNMSYGGLSF-SGQSSDDISQYGYLCDFTHFPYPFQA 177

BLAST of Carg02132 vs. ExPASy TrEMBL
Match: A0A6J1BVX5 (LOB domain-containing protein 21-like OS=Momordica charantia OX=3673 GN=LOC111006205 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.4e-78
Identity = 154/180 (85.56%), Postives = 163/180 (90.56%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCHETRSSSSCAACKLLKRRCT TCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTATCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+A+ARLARYA++ +
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALARARLARYANNSN 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAA-GQSSSAITQYGYLCDFTHFPYPSKA 180
             +   SSS+S SS GVL++CVVNM YGG SIA   QSSS ITQ GYLCDFTHFPYP KA
Sbjct: 121 TNNNSCSSSASCSSSGVLDDCVVNMSYGGFSIAGQSQSSSEITQLGYLCDFTHFPYPFKA 180

BLAST of Carg02132 vs. ExPASy TrEMBL
Match: A0A6J1GN41 (LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111456020 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 151/179 (84.36%), Postives = 164/179 (91.62%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRGCH+TRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKM ELQHDLA+AKARLARYA +++
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 180
           N       ++SS+S+GVLENCVVNM YGGLS  +GQSS  I+QYG+LCDFTHFPYP +A
Sbjct: 121 N-------NTSSTSLGVLENCVVNMSYGGLSF-SGQSSDDISQYGFLCDFTHFPYPFQA 171

BLAST of Carg02132 vs. TAIR 10
Match: AT3G11090.1 (LOB domain-containing protein 21 )

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-46
Identity = 104/158 (65.82%), Postives = 117/158 (74.05%), Query Frame = 0

Query: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG HE RSSSSCAACKLLKRRCTPTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL   A S  
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRL--LAHSGV 120

Query: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSS 159
           N S  S    S      L+     +PY  L +  G ++
Sbjct: 121 NNSQVSPLDDSPELAAFLD----LVPYSDLMLLDGSTN 151

BLAST of Carg02132 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 148.7 bits (374), Expect = 4.6e-36
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           SSS CAACK L+R+CT  C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 4   SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDA 63

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Sbjct: 64  VNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

BLAST of Carg02132 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

BLAST of Carg02132 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

BLAST of Carg02132 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARY 116
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022938953.12.0e-94100.00LOB domain-containing protein 21-like [Cucurbita moschata] >KAG7016020.1 LOB dom... [more]
KAG6578457.15.5e-9298.88LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_022993160.12.1e-9196.70LOB domain-containing protein 21-like [Cucurbita maxima] >XP_022993162.1 LOB dom... [more]
XP_023549826.13.0e-9093.09LOB domain-containing protein 21-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023549827.12.2e-8894.41LOB domain-containing protein 21-like isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9SRL82.4e-4565.82LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 S... [more]
Q9FKZ36.4e-3565.42LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S... [more]
O044798.4e-3563.55Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Q8L8Q31.9e-3464.81LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S... [more]
Q9FML42.1e-3365.09Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1FKB99.8e-95100.00LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111445... [more]
A0A6J1JS051.0e-9196.70LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC11148925... [more]
A0A6J1JJ753.1e-8088.27LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC11148742... [more]
A0A6J1BVX56.4e-7885.56LOB domain-containing protein 21-like OS=Momordica charantia OX=3673 GN=LOC11100... [more]
A0A6J1GN413.2e-7784.36LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111456... [more]
Match NameE-valueIdentityDescription
AT3G11090.11.7e-4665.82LOB domain-containing protein 21 [more]
AT5G66870.14.6e-3665.42ASYMMETRIC LEAVES 2-like 1 [more]
AT1G65620.16.0e-3663.55Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.26.0e-3663.55Lateral organ boundaries (LOB) domain family protein [more]
AT1G65620.36.0e-3663.55Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availablePANTHERPTHR31301:SF24LOB DOMAIN-CONTAINING PROTEIN 21coord: 1..138
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 1..138
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 12..109
e-value: 4.7E-39
score: 133.0
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 11..112
score: 25.463238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02132-RACarg02132-RAmRNA