Carg01286 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01286
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein sym-1-like
Location	Carg_Chr06: 224174 .. 228005 (-)
RNA-Seq Expression	Carg01286
Synteny	Carg01286

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATAAGGGAAAAGAACAAAACGCAGATGAACATTGAACAGCTAGACCAGTTATCGCCTACATTGGCCAATGTGAAAAATGCTGTGCTTTGATTCTCGCCTGGAACAGCAGAATTAAACAATCCTCATCTTCCTCTGTTGCATTTGCATCACTGCAAAACCTAGTGTTGACCTCTCAAAGCTTCTCAAAATTACCTTCCTTCACTGTCTAAGCTTTCTGATCGTCCACGACAGAGATGGTTCTCCGTGGCGCCACTCTTTCTCTTCAACATCCTCCCCTTTGTACTCGCTCCACCTTTAATGGGGGACCCTCCCTACGCTTCGGCCTCCAAGCCCGAAGCCTTGAAACCCCAGTTCAAATCAAGGGTACTCATGCCTGTTCTTTCTCCCGTAGTCACCGATTGGAGTTTAAGGTTGTGGGTCGGCGTCAAATGCAATGTGGGTCGCTGAGATTTAGGAATTTCCGGATTTCGGCATCCTCTGGCGATGGCTCTGGCGACAGTTTTGGCTCTGGGGGTGGCGGTGATGGATATGGAGGTTATGGTCGTGAAGATTCTGGAGGCGGAGAAGGGGATAGTGGCAAAGGCGGGGATAACTGGTCCTTCTTGTCTTGGTAATAGATTTCATACAGATTAATTCCATCTCCCTTTTCATCTTTGCATGCATTAAGCCTTTGAATTATTTATCTAAGGTTCCTTCTAACACTTGCAACAGCTGACAATCTGATCGGTGCTTGTAATCACATATGCTTCCTTCTTGTTGAATGCCTATAATGTTTTTTCTTACGGCATACTTTCTTGAGATGCACTAATTTATGAGTGACTTGAGCTTCGCCATATCTGAAACTAGTTGCCTCCTGTTGGTCCATTGAAACTAAGCAAGTGTCTCATGATCCAGACTGATTATGGAACCTTTGTCCACGAAACACTGATCTACCAAGATCCTAAAAATATCGACCATTCCAATTTTTCTTCATTGATTCCACAGCCCAAAAGCTCCAAGTTTTGCAACTTGCTCACCTTTTCATGTTATTTATTACTTTGGTGGACCTTTGAGAAGTACTGGAGGGAGGATAACCTTAACAAATGCTTCTCTGATCGGTTGGTGACTAGAATCCCCTCATCAAACAAGTGTTATAGTAGGAAAAATGTAAGGGGAAACGTGATGCTTTGTTGGTCAGACACAATTTTTGTTTCTAATGATTGGATATCTACTTGAGGGCTTCCTTTTGGCTCCTTTGAATGAAAATTAACAACCAAGTTTTCAATAGTGAAGTTAGAGTTATAGATGGTACATTCGATAAAGTCTTTTGGGTAGGGCTAATCCAGAAAATTGATGCGTAACTCCCTCTAAATACTTGAGAGAACTTTATATATTTGAAACAAACTGATATTATTGTTCTAGTCCTTCTGCAAGTTGCAAACTATTTTGGTGTGTTCTCATGGTAGTATAAACCTCTTGCGACTGAAAGAAGGCTTAAGATTCAAGGCTACAAATTGAGCCTCCTATATCTTCCATTTATGAAAGGAATTAACATAACATACCTATAGATCTTACCCAAGTTTGGCCTTTACTCTGAGATAACTAAATTGATTAGAGAGATGTCTAGTGCAATTGACGATGGACCACCTCAGAAAGGGGGTGTAGTTCCGACATCAACTTTAAATTTGAGCTATCAAGTACGGCTGAAGGAAAACATTGATCCCACCGTACCGTGTTAGTCTGCGTCAATTGTCATTTGGCGTACAATACTCGTCCTTGTTCATATGTAGTCCATCGCCCGTGACAAAAATGGTGGCCGACTTCACTATACTTTCTTGTCATCTGCTGCCATGTTTCTATTCTAAAAAATAAATTAAGTTCCTGTTGGTATTTTGTTTGATTTTCAGCGGAATGCATGTGAGGTAGTCTTTCTTATTGGTTCTGAACCTCTTCCTTTCCTCTTAGCTTCTGTTTACAAGCTTGAATCAGAAATAAGTTCGCCATTCTTTTTTTTGCCTTACAAACTTGATTCTGTGTTATTCCAGGTATTTGTCTCTTCTTGCAAAATACCCTGCTTTGGTGAAATCTGTAACATCTGGGATACTAAATGCTCTGGGAGATTTTATTTGTCAGGTTTGCCTCCTTATCTGCACCAACTTCAATTATATCCATCCTCTAGTACTTCATTGGTGTATGTTTCATAGGGCTTTCCGAACGTTCCGATAGTTAGGGGCATGCTGAATGACCATCTTGGAGATATATGATTTGCTATGAATGTATCTTTTTCTCTATCTTTGGCCTTACTTTCAGCTGGTGCACCGTTTTTCTGGTAAGGACTATTGTACTAAATGTTTGAACATATTCACATAGCTTGTTTTTGAAGACGCACCGTCGGCAGATCTGAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTCGGTCCTGCCTTGCATTTCTGGTATTTCTTCAAACTAAAATCTTGAAGTATGTCTGAATTATCTTTTAAAAATGAAGACTCAATTGTAATCCTTCATGAACTATCTTTAGATACTTGTTTGTTTAATGGATGAACACTTATAGGTATTTGTATCTAAGTCAATTGGTGACCCTGCCAGGAGCTTCAGGTGCATTCTTGCGCCTTCTTCTTGATCAGGTAATCCAGCTATTAGAAGACAGTTCTTAGTACGTAATTTAACTCGACGTTCTGTTTGTTAATGGAATTTAACGATGGCAGTTCGTGTTTACTCCGGTGTTCCTTGGAGCGTTTCTAGCTGGATTACTAACATTGGAAGGGCGACCGTCACATATTATTCCCAAGCTTCAACAGGTTCCAATTGAACATCTTCTGCTCCAACAAGAGAGAAGCAATCTGTTAATAATTTCAGCCTCAAACTTGTGTTTTTTTTTTTTTTTTTGCTTTGTAGGAATGGTTTTCTTCTGTTGTGGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAACTTCAGATTTGTTCCCCAGCAATTCCAGGTATGTCTTATTTACATTTTATCCAGTTTCTGTTCTGTTCTTCTTGCACCATTTCGGGACACGGCCCGGTTTCTTCGGCATGCCTGTTGTTGTGTCGTTTTATGAAACGATAGGATTTTAGGAGTTCGAAAGTTTGTGGGAGGAGGTTTGATCCTTTGTCAAACTCCACACCTCCCTTTGAGCTTTGGTGCAACACAACAACAATATCTCGATACGTATTGAAAACCATGCCTTTCAAACACAGCACTCGTATTTATTTCAGGTCCTTGCAGCTAATGTCCTTGCCTTGGCATGGAATGTCATCCTCTCCTTCAAAGCTCACAGAGAGATCGTTACATGATAGGTAAAAAGCTTCATTTGTCGTGGAGTCATGCAACGAAAAGACTGGGAAATAACGAATAATGAAACAATTCATATATTGACATTCCGTGCTCATTTCTGCTTTCTTATTCCCATCATCCAATAACCACGTGATGATCCACAAGAAAGGTGGTAGGATTCGAACCTATAGCCGGCCCGAAGTCCGTATTTTGGTCAATCTATGATAATTTGCTATAGATTTATTTTTTTTCCGAATATGTTTTCAGAAATAGTTCGTTTGCTCTTGGAACACAAAAAAAATGCAATATGGAGATTGGATTAGATAGTTGCATTGTCTCTCTTTCTGTATTCTTAAGCTTTATGAACTTGGTTTTGATCGTTAAATGGCCTACCCGTCATTGCATGCACGTATTAAAGGCTTTAAATTTATGTGTATTTTAAATATTCTACGTCCGTAAGTAACAGACCATGACTCGAATCTCTCAAAAATTGGATCGTTACAAAAGCTTAC

mRNA sequence

AGAATAAGGGAAAAGAACAAAACGCAGATGAACATTGAACAGCTAGACCAGTTATCGCCTACATTGGCCAATGTGAAAAATGCTGTGCTTTGATTCTCGCCTGGAACAGCAGAATTAAACAATCCTCATCTTCCTCTGTTGCATTTGCATCACTGCAAAACCTAGTGTTGACCTCTCAAAGCTTCTCAAAATTACCTTCCTTCACTGTCTAAGCTTTCTGATCGTCCACGACAGAGATGGTTCTCCGTGGCGCCACTCTTTCTCTTCAACATCCTCCCCTTTGTACTCGCTCCACCTTTAATGGGGGACCCTCCCTACGCTTCGGCCTCCAAGCCCGAAGCCTTGAAACCCCAGTTCAAATCAAGGGTACTCATGCCTGTTCTTTCTCCCGTAGTCACCGATTGGAGTTTAAGGTTGTGGGTCGGCGTCAAATGCAATGTGGGTCGCTGAGATTTAGGAATTTCCGGATTTCGGCATCCTCTGGCGATGGCTCTGGCGACAGTTTTGGCTCTGGGGGTGGCGGTGATGGATATGGAGGTTATGGTCGTGAAGATTCTGGAGGCGGAGAAGGGGATAGTGGCAAAGGCGGGGATAACTGGTCCTTCTTGTCTTGGTATTTGTCTCTTCTTGCAAAATACCCTGCTTTGGTGAAATCTGTAACATCTGGGATACTAAATGCTCTGGGAGATTTTATTTGTCAGCTTGTTTTTGAAGACGCACCGTCGGCAGATCTGAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTCGGTCCTGCCTTGCATTTCTGGTATTTGTATCTAAGTCAATTGGTGACCCTGCCAGGAGCTTCAGGTGCATTCTTGCGCCTTCTTCTTGATCAGTTCGTGTTTACTCCGGTGTTCCTTGGAGCGTTTCTAGCTGGATTACTAACATTGGAAGGGCGACCGTCACATATTATTCCCAAGCTTCAACAGGTTCCAATTGAACATCTTCTGCTCCAACAATTGTGTTTTTTTTTTTTTTTTTGCTTTGTAGGAATGGTTTTCTTCTGTTGTGGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAACTTCAGATTTGTTCCCCAGCAATTCCAGGTCCTTGCAGCTAATGTCCTTGCCTTGGCATGGAATGTCATCCTCTCCTTCAAAGCTCACAGAGAGATCGTTACATGATAGGTAAAAAGCTTCATTTGTCGTGGAGTCATGCAACGAAAAGACTGGGAAATAACGAATAATGAAACAATTCATATATTGACATTCCGTGCTCATTTCTGCTTTCTTATTCCCATCATCCAATAACCACGTGATGATCCACAAGAAAGGTGGTAGGATTCGAACCTATAGCCGGCCCGAAGTCCGTATTTTGGTCAATCTATGATAATTTGCTATAGATTTATTTTTTTTCCGAATATGTTTTCAGAAATAGTTCGTTTGCTCTTGGAACACAAAAAAAATGCAATATGGAGATTGGATTAGATAGTTGCATTGTCTCTCTTTCTGTATTCTTAAGCTTTATGAACTTGGTTTTGATCGTTAAATGGCCTACCCGTCATTGCATGCACGTATTAAAGGCTTTAAATTTATGTGTATTTTAAATATTCTACGTCCGTAAGTAACAGACCATGACTCGAATCTCTCAAAAATTGGATCGTTACAAAAGCTTAC

Coding sequence (CDS)

ATGGTTCTCCGTGGCGCCACTCTTTCTCTTCAACATCCTCCCCTTTGTACTCGCTCCACCTTTAATGGGGGACCCTCCCTACGCTTCGGCCTCCAAGCCCGAAGCCTTGAAACCCCAGTTCAAATCAAGGGTACTCATGCCTGTTCTTTCTCCCGTAGTCACCGATTGGAGTTTAAGGTTGTGGGTCGGCGTCAAATGCAATGTGGGTCGCTGAGATTTAGGAATTTCCGGATTTCGGCATCCTCTGGCGATGGCTCTGGCGACAGTTTTGGCTCTGGGGGTGGCGGTGATGGATATGGAGGTTATGGTCGTGAAGATTCTGGAGGCGGAGAAGGGGATAGTGGCAAAGGCGGGGATAACTGGTCCTTCTTGTCTTGGTATTTGTCTCTTCTTGCAAAATACCCTGCTTTGGTGAAATCTGTAACATCTGGGATACTAAATGCTCTGGGAGATTTTATTTGTCAGCTTGTTTTTGAAGACGCACCGTCGGCAGATCTGAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTCGGTCCTGCCTTGCATTTCTGGTATTTGTATCTAAGTCAATTGGTGACCCTGCCAGGAGCTTCAGGTGCATTCTTGCGCCTTCTTCTTGATCAGTTCGTGTTTACTCCGGTGTTCCTTGGAGCGTTTCTAGCTGGATTACTAACATTGGAAGGGCGACCGTCACATATTATTCCCAAGCTTCAACAGGTTCCAATTGAACATCTTCTGCTCCAACAATTGTGTTTTTTTTTTTTTTTTTGCTTTGTAGGAATGGTTTTCTTCTGTTGTGGCTAA

Protein sequence

MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKVVGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDNWSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQVPIEHLLLQQLCFFFFFCFVGMVFFCCG

Homology

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BLAST of Carg01286 vs. NCBI nr
Match: KAG7027719.1 (PXMP2/4 family protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240

Query: 241 QQVPIEHLLLQQLCFFFFFCFVGMVFFCCG 271
           QQVPIEHLLLQQLCFFFFFCFVGMVFFCCG
Sbjct: 241 QQVPIEHLLLQQLCFFFFFCFVGMVFFCCG 270

[Close]

BLAST of Carg01286 vs. NCBI nr
Match: KAG6596182.1 (hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.2 bits (1206), Expect = 2.5e-128
Identity = 240/242 (99.17%), Postives = 240/242 (99.17%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF NFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYLSLLAKYP LVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

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BLAST of Carg01286 vs. NCBI nr
Match: XP_023539960.1 (protein sym-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.7 bits (1184), Expect = 8.8e-126
Identity = 235/242 (97.11%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           M+LRGATLSLQHPPLCTRSTFNGGPSLRFGLQ RSLETPVQIKGTHACSFS SHRLEFKV
Sbjct: 1   MLLRGATLSLQHPPLCTRSTFNGGPSLRFGLQTRSLETPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF NFRISASSGDGSGD FGSGGGGDGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYL LLAKYP LVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLFLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg01286 vs. NCBI nr
Match: XP_022971452.1 (protein SYM1-like [Cucurbita maxima])

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124
Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSL+TPVQIKGTHACSFS SHRLEFKV
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLKTPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF NFRISASSGDGSGD FGSGGG DGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGSDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYLSLLAKYP LVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGL LV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGR SHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRRSHIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg01286 vs. NCBI nr
Match: XP_022937869.1 (protein sym-1-like [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 234/242 (96.69%), Postives = 234/242 (96.69%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MVLRGATLSLQHPPLCTRS FNGGPSLRFGLQARSLETPVQIKGTHACSFS SHRLEFKV
Sbjct: 1   MVLRGATLSLQHPPLCTRSAFNGGPSLRFGLQARSLETPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF NFRISASSGDG    FGSGGGGDGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDG----FGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYLSLLAKYP LVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 238

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 238

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BLAST of Carg01286 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.2e-14
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 125 SWYLSLLAKYPALVKSVTSGILNALGDFICQ---LVFEDAPSADLKRTFRFSLLGLALVG 184
           S YLS L KYP   K+VTSG L  + D + Q   L  +     D KR+ R ++ G A+ G
Sbjct: 13  SHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTG 72

Query: 185 PALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGR-PSHIIPKL 243
           P  H+W+ YL +         AF++L +DQ V +PVF   F +G+  LEG+    I+ KL
Sbjct: 73  PLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKL 132

[Close]

BLAST of Carg01286 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 6.1e-13
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 124 LSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFED------APSADLKRTFRFSLLGL 183
           LS YL LL  YP L K+ TSGIL+ALG+F+ QL+ +       +   D+    R+++ G 
Sbjct: 22  LSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGF 81

Query: 184 ALVGPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGR 233
              GP  HF+YL + + +          RLLLD+ +F P FL  F   +  LEG+
Sbjct: 82  FFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQ 136

[Close]

BLAST of Carg01286 vs. ExPASy Swiss-Prot
Match: Q9NR77 (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-12
Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 113 DSGKGGDNWSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLV-----FEDAPSADLK 172
           ++G G      L+ YL  L  YP L K+ TSGIL+ALG+F+ Q++      E++ S D+ 
Sbjct: 11  EAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVG 70

Query: 173 RTFRFSLLGLALVGPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLL 232
              R+++ G    GP  HF+Y ++   +          RLLLD+ VF P FL  F   + 
Sbjct: 71  GPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMN 130

[Close]

BLAST of Carg01286 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.7e-11
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 127 YLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSA--DLKRTFRFSLLGLALVGPAL 186
           Y +L+AK+P  V+ +T+G L  +GD I Q + E    A  + +RT +   +G   VGP +
Sbjct: 8   YQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVGPVV 67

Query: 187 HFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEG 232
             WY  L +LVT    S A  ++L+DQ  F P FLGAFL    TL G
Sbjct: 68  GGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNG 114

[Close]

BLAST of Carg01286 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 124 LSWYLSLLAKYPALVKSVTSGILNALGDFICQLV----FEDAPSADLKRTFRFSLLGLAL 183
           L+ YL LL  YP L K+V+SGIL+ALG+ + Q +     +D+   ++    R+ + GL +
Sbjct: 22  LAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFV 81

Query: 184 VGPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGR 233
            GP  H+ YL++   V       +  RLLLD+  F P FL  F   +  LEG+
Sbjct: 82  TGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGK 134

[Close]

BLAST of Carg01286 vs. ExPASy TrEMBL
Match: A0A6J1I1Z8 (protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.1e-125
Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSL+TPVQIKGTHACSFS SHRLEFKV
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLKTPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF NFRISASSGDGSGD FGSGGG DGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGSDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYLSLLAKYP LVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGL LV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGR SHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRRSHIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg01286 vs. ExPASy TrEMBL
Match: A0A6J1FCF7 (protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111444129 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.8e-124
Identity = 234/242 (96.69%), Postives = 234/242 (96.69%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MVLRGATLSLQHPPLCTRS FNGGPSLRFGLQARSLETPVQIKGTHACSFS SHRLEFKV
Sbjct: 1   MVLRGATLSLQHPPLCTRSAFNGGPSLRFGLQARSLETPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF NFRISASSGDG    FGSGGGGDGYGGYGREDSGGGEGDSGKGGDN
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDG----FGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYLSLLAKYP LVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 238

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 238

[Close]

BLAST of Carg01286 vs. ExPASy TrEMBL
Match: A0A1S3B718 (protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 6.6e-103
Identity = 197/242 (81.40%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MV  G TLSL+ P LCTR +FNGG    FGLQA  LETPVQ+KGT  CSF  +HRLEF  
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF +FRISASSGDGSGD FGSG G  G+GGYG E+SGGGEGDSGK G+N
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYL+LLAKYPALVKS+TSGILNALGD ICQ+VFE+APSADL+RTFRFSLLGL LV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+RLLLDQF+FTPVFLG FL+GL+TLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg01286 vs. ExPASy TrEMBL
Match: A0A5D3DPM1 (Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 6.6e-103
Identity = 197/242 (81.40%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MV  G TLSL+ P LCTR +FNGG    FGLQA  LETPVQ+KGT  CSF  +HRLEF  
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQMQCGSLRF +FRISASSGDGSGD FGSG G  G+GGYG E+SGGGEGDSGK G+N
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYL+LLAKYPALVKS+TSGILNALGD ICQ+VFE+APSADL+RTFRFSLLGL LV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+RLLLDQF+FTPVFLG FL+GL+TLEGRPSHIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg01286 vs. ExPASy TrEMBL
Match: A0A0A0LC77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.7e-101
Identity = 195/242 (80.58%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60
           MV  G TLSL+ P LCTR +FNGGP+  F LQA  L T VQ+KGT  CSF  +HRLEF  
Sbjct: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQMQCGSLRFRNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120
           VGRRQ QCG LRF +FRISASSGDGSGD FGSG G  GYGGYG E+SGGGEGDSGKGG+N
Sbjct: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120

Query: 121 WSFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180
           WSFLSWYL+LLAKYPALVKSVTSGILNALGD ICQ+VFE+APSADL+RTFRFSLLGL LV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+RLLLDQF+FTPVF+G FL+GLLTLEGRPS IIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240

Query: 241 QQ 243
           QQ
Sbjct: 241 QQ 242

[Close]

BLAST of Carg01286 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 179.1 bits (453), Expect = 4.7e-45
Identity = 108/220 (49.09%), Postives = 132/220 (60.00%), Query Frame = 0


Query: 40  VQIKGTHACSFSR--------SHRLEFKVVGRRQMQCGSLRFRN---------FRISASS 99
           V   G H+ SF R        S  L F       ++CG   +            R+SA  
Sbjct: 18  VGFSGNHSSSFGRRTITEGSSSKALSFGYKNVGSLKCGRSNWPGRSGTAFGHLVRVSAVP 77

Query: 100 GDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDNWSFLSWYLSLLAKYPALVKSVT 159
           G  SG S G GG G G GG G    GGG+G  GK G  WS LSWY +LL+  P L K+VT
Sbjct: 78  GGNSGGSGGLGGSGGGGGGSG---GGGGDGSDGK-GKKWSLLSWYQALLSNSPVLTKAVT 137

Query: 160 SGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPALHFWYLYLSQLVTLPGASG 219
           + +LN +GD ICQL      S D KRT  F+ LGL LVGP LHFWYLYLS++VT  G SG
Sbjct: 138 AALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHFWYLYLSKVVTASGLSG 197

Query: 220 AFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQ 243
           A +RLLLDQFVF P+F+G FL+ ++TLEG+PS++IPKLQQ
Sbjct: 198 AVIRLLLDQFVFAPIFVGVFLSAVVTLEGKPSNVIPKLQQ 233

[Close]

BLAST of Carg01286 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-11
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 122 SFLSWYLSLLAKYPALVKSVTSGILNALGDFICQLV-FEDAPSADLKRTFRFSLLGLALV 181
           +FL WYL  L  +P + KS+T+ ++    D   Q++  E   S DL RT R +  GL  +
Sbjct: 77  AFLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFL 136

Query: 182 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPS-HIIPK 241
           GP+ H W+ YLS+++        F ++++ Q +F PV    F +    L+G  S  I+ +
Sbjct: 137 GPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVAR 196

Query: 242 LQQ--VPI--EHLLLQQLCFFFFFCFV 263
           L++  +P     L+   +C F  F +V
Sbjct: 197 LKRDLLPTLKNGLMYWPVCDFVTFKYV 223

[Close]

BLAST of Carg01286 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.9e-11
Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = 0


Query: 123 FLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFE-DAPSADLKRTFRFSLLGLALVG 182
           F+ WYL ++  +P + KSVTS ++    D   Q + +  + S DL RT R    GL ++G
Sbjct: 73  FVGWYLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLG 132

Query: 183 PALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEG-RPSHIIPKL 242
           P LH+W+ ++S+L         F ++ + Q ++ P+    F +   +L+G R S I+ +L
Sbjct: 133 PTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARL 192

Query: 243 QQVPIEHL----LLQQLCFFFFFCF 262
           ++  +  L    +   LC F  F F
Sbjct: 193 KRDLLPALFNGVMYWPLCDFITFRF 217

[Close]

BLAST of Carg01286 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-10
Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 123 FLSWYLSLLAKYPALVKSVTSGILNALGDFICQLVFE-DAPSADLKRTFRFSLLGLALVG 182
           F+ WYL ++   P L KSVTS ++    D   Q + +    S DL RT R    GL ++G
Sbjct: 82  FIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILG 141

Query: 183 PALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEG-RPSHIIPKL 242
           P LH+W+  +S L         F ++ + Q V+ P     F +    L+G   S I+ +L
Sbjct: 142 PTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARL 201

Query: 243 QQ----VPIEHLLLQQLCFFFFFCF 262
           ++      +  ++   LC F  F F
Sbjct: 202 KRDLLPTMLNGVMYWPLCDFITFKF 226

[Close]

BLAST of Carg01286 vs. TAIR 10
Match: AT1G52870.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.8e-05
Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 127 YLSLLAKYPALVKSVTSGILNALGDFICQLVFEDAP--SADLKRTFRFSLLGLALVGPAL 186
           Y   L + P L K V SG++ ++GD+I Q  +E  P    D  RT R  L+G  L G   
Sbjct: 173 YEEALKQNPVLAKMVISGVVYSVGDWIAQ-CYEGKPLFEIDRARTLRSGLVGFTLHGSLS 232

Query: 187 HFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAF--LAGLLTLEGRPSHIIPKLQ 242
           HF+Y +  +L          +++  DQ V++ ++   +  + G L  E  P  I  +L+
Sbjct: 233 HFYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFES-PISIFKELK 289

The following BLAST results are available for this feature:

BLAST of Carg01286 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027719.1	2.0e-146	100.00	PXMP2/4 family protein 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596182.1	2.5e-128	99.17	hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023539960.1	8.8e-126	97.11	protein sym-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971452.1	1.3e-124	96.69	protein SYM1-like [Cucurbita maxima]	[more]
XP_022937869.1	1.4e-123	96.69	protein sym-1-like [Cucurbita moschata]	[more]

BLAST of Carg01286 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54FR4	7.2e-14	37.70	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
Q2KIY1	6.1e-13	37.39	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]
Q9NR77	4.0e-12	35.20	Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3	[more]
Q5TZ51	5.7e-11	40.19	Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1	[more]
P42925	1.3e-10	36.28	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]

BLAST of Carg01286 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1Z8	6.1e-125	96.69	protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1	[more]
A0A6J1FCF7	6.8e-124	96.69	protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111444129 PE=3 SV=1	[more]
A0A1S3B718	6.6e-103	81.40	protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1	[more]
A0A5D3DPM1	6.6e-103	81.40	Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 ...	[more]
A0A0A0LC77	4.7e-101	80.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1	[more]

BLAST of Carg01286 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19750.1	4.7e-45	49.09	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	1.2e-11	30.61	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	5.9e-11	29.66	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G33905.1	6.5e-10	29.66	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT1G52870.1	4.8e-05	29.41	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11266:SF80	PEROXISOMAL MEMBRANE PROTEIN 2	coord: 117..261
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 117..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01286-RA	Carg01286-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane