Carg00389 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00389
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1
Location	Carg_Chr04: 6968389 .. 6972407 (-)
RNA-Seq Expression	Carg00389
Synteny	Carg00389

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTTTTAGTTTTCCCATCCCCCTCGGGGTTAACCCTTGCAAACAGATAGAGAAAATGGAGAAATTGCTAGAGGAATCAGGATTACAGTTGCTTAATAGAGAATTTTGTCAAAAAGTTACCCAAGGTTTCAAGTGAGTTTCATTTTTCTCATTTGTTATATGACTTTTAATGAACCTTTAAATATGTATATGATGTATGTATAATATAAAGTTCTCATATTTTGGCATTTCATTTCGATGCAGTCGGTCTTCTGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTTGTCACATTGTTTACTTTTTGCTTATTCTCTTGTTTTCGTAATATTATTCTATTTCTACTGTTGTATATCTTGCGAATAGGACTTGATAAACATTTTCTTGTGGGCATTTGGAAATCGTTGGTGTAAATTCCTGCAGGTCTTTGTTGTGAGTTCTGCCTTCAATTTTTGTTTAGAGAGCTCTCTTGAGCAAATGCTTAGTAACTTCCTTGTGGAAGAATCATTCTTTGGCAGGGTACTTTGGTCACTGTGGGTATTTGGCTGGAGAAGAATAAAAAGTTTTTTGAAGCTTGATTTTTCGACGGGGTTAGGTATGGAGTCTTGCACAACAGCAAGTCTCCTCTAATTACAACAGTATAGTCTTATATAGGTCTCCGGAGATGTTTCTTTTTTTCTTTTTGCTTTTCCCTCTTCTCCATTTCTTTATTTACTGTTCTTTATCTGGCCATCTTTTGTATTTTCACGTTTGAAAAGAAAAAATGGTTCTGGTGAAAATTTGTCTTCATAAAATGTTACAGGTATACAATTGGCTCCAAAGTCGACTGCAAGACTTCCCGAAAAATGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAACGCCCCGAAGGTAACTTGAGCCAAGTATTTGTCTCCATTGTTTTTGAAGGCAAAGTTACTCAGCTGTAGGATGGTTTAATGTTAAAATGACAATTACTTTCTAGTTTCAACTCTAACTGCAACCATCATACATGTATGTCTGCACATACATTAAGCCTTTTTTTTTCTCTCTCCTTTTTCACATGCTAATGATCTTTATTTAAAAGCAGGTGAAAAGAGCCCAGATTTATCAGAATTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGTGAAGAAATCACTACCTTCGGTTTTGTTTAGATAGGTGCATCTTTTGGGTGTTCGTCTTTGTATTTTCTCTGATGTTCTTGTACGGTTTGAATACGACTCCAAAGGTAAAGCTAGGGATATCACCCGATATAACAGAGTTATTTAGATGGGATAAGTTAAACATATCTTTGAGTTTCAATGTGCCCAACCCTTTAAAGCAGACAATCTCCTCCTTGATTCAAGCATTTTCTTAAGATTTCTTTTGTTTAGCTCCCTTTTGGCCATGAGTTGGAGCTTTGGGAATAAAGGAATAGGAGCTTCAAGGGACAATATAGAGGATTGATTGATTGGAAGTGTGGGATTGGCTTAATATATTGTATGTAATCGGCTCTCTCATTATGATGCCTGGTCCTATGCAGAATTTTTGTTCATTAGTATTTGTGTTTCTTATCATAAACAAGCTCTAAATAGGGAAAACAAAAAATAAATTCTCTTTGAAGCAAGAATTGGGAAGTTATGGTACGCATTGAATGTCTTGTTTATGTAACCATTTAATCTTACTGCCAATGTGATTACGATAGACCCCAAATTACCAAGGTTTATACACGTTGAACTAGGAAAGAGAAAGTGGGGGAGCTGAGTGATAGTATGTGAGAAATGAGCGTTTGTATAATCTTTTGGACGAGTGTTTGTTGTGATTTTGTGGGGCGCAGGTGTTTGGTGAGTTAGAGGTGGGCTGAGCTTTTTTTATATTGGGATAGCCATTTAAGGGTTGGTCTCGGTGAAGGAGAGTATGTTTTGGTCTTGTTGTTTTTGTACTCATATTCTGTGTGTTCTTGAAGAGAGGGAATCTCTCAAATCTCCTTTGTGCCATTAATAGTCGATAAATAAATCGAGGTTTATCAGATTACGCAGCAGTGATTTACTATGATATTATTTCAATTCGTAAGAATGGTCGTTTGTGTATGATTAGTAAGTGCAGATATTGAATCTAATTAGAAATTTCCTTTCGGTATCTGATTGTAAATTATAATGGACTAAAGGTTGAATATGGTTGCTACCTACTTGAAGAAGAGGATTTTACTATGAAACTTTGTGATGTTCAGGTTATTAAGGGGAAATATAAAACAGAAAAGAATGATAACTCTATGTTGGTTTTAGGTGAAGCTGTATTTGTGGTTTCTGCTTGTTACCATTTCAAATTTTTGCTGCGGTTCTGATGGCATTCCCCTTATATATATTATGCAGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGGTCAGGCGAAGCTGTGAGTCTTTGAACCATGACATCTTTTTTTCTTCTTGTATTCTGATTTATGACACCTTCCATTTTTCACGGAGTATAAGATTTGTTGAACCAAGTGAGCTCATGGTTCATAAAGGTGTCTGCTCTGGGCTTTAGATGTATGAGTACTCATTAACTTATACATGCACGTATATGCATGTGATGCTCGTAGCAGAATATAATTTCATTAGAGTTTTCATTTGGTTGTCTGATTGGTTTTGCCAATTCATTAAAGGAAGCGCGAGTCAGATTTGTCGGATTCGGAGCCGAGGAAGACGAATGGGTCAACATAAAACAGGCAGTACGAGTACGCTCTGTCCCTATAGAACATTCAGAGTGTCAAAAGTTGAAGGTTGGGGACATTGTACTCTGCTTCCAGGTGACTAATTAATGCAAAAACCTTTGGACAACCGGTAGATTGTTCATTTATCTGTAGTCCATTTCTATCTTAGATATTAAATTTTTCAGGAGAGGAGAGATCAGGCAATCTACTATGATGCACATATTGTGGAAGTCCAGAGGAGAATGCATGACATTAGGGGCTGCAGGTGTCTTTTCCTGGTTCGTTACGAACACGATAGCACCGAGGTAAGTATCACTTTCTCGAGCTCTCTCGTTACAGCTTTTGAAGTAGTTCATAACAAGCTCACGTACTTGTTCAACACCCAGGAAAAAGTTCGTTTGAGAAGATTATGTCACAGACCGGCACATCGATTCTAAGCTGGAGATATGAATGGTTTGCCACAGAAACTACAATGGGTAATGCTAATTTTGTATGTTCTTTCATAAAGGTGAGGGCATGTTGTGGGTAAAATTTCATAATAGAAGTGGTTTGATTGTTTTCACCTTATTGTTTGTGTATCCATGGCATCTGTAGTTTCTCCCAAAAGCCGTGGGAACAAGCATGGGAGACGCACATGTAATTGTTGCATATTCTATGCCTATCTATGGCAAATTGGGCAAGACACGAGTTCGAACTTTTAGTGGGTTTTAATATCTCTCTCTGCCCATTGCTTGCAAATCTTTAGCCATTTTAAACAGGTCTGTAACAGAGAGAGAGTCTTGAGATCCACTGAGACAACCATAGCCAAAGCTGTGGACTTTCAGAGGGAATTTTGGGACACCTTCAACACTACCACATGGTTCGACCCGAAACTCTCCTTAACCAATTCTATGAGAAAGGTTGCTAGAAAAAGTTTCGAGAAATGAAATTCGAGCAGTTTCGGCTCTTCGATTAAGCACTCTTGAAGCATTAGTTGTGATCCCATAATTAGTCTCGACTTTCTCTTGAATCTCTCAAGATTGTTTGCTTGAGTTCAAAGTTTAGCTTTATAATTGTTGCTAAAACTGGTTTTGTTGCGTAAAAACTATATTTAATAGGAGTGTTCGTGGGTTAGGTAGATCCAACCCAACTTGAACTAACATAATCGGTTTGATTGTTTGAGGTTTTCTTATTCAATCTTAAGTAAAATGTCGTAAAGTAGCTCAAATTTTCGCTTTCAAAAACTTATGAGCTAACACAATCCAT

mRNA sequence

TCATTTTTAGTTTTCCCATCCCCCTCGGGGTTAACCCTTGCAAACAGATAGAGAAAATGGAGAAATTGCTAGAGGAATCAGGATTACAGTTGCTTAATAGAGAATTTTGTCAAAAAGTTACCCAAGGTTTCAATCGGTCTTCTGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACAATTGGCTCCAAAGTCGACTGCAAGACTTCCCGAAAAATGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAACGCCCCGAAGGTGAAAAGAGCCCAGATTTATCAGAATTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGGTCAGGCGAAGCTGAAGCGCGAGTCAGATTTGTCGGATTCGGAGCCGAGGAAGACGAATGGGTCAACATAAAACAGGCAGTACGAGTACGCTCTGTCCCTATAGAACATTCAGAGTGTCAAAAGTTGAAGGTTGGGGACATTGTACTCTGCTTCCAGGAGAGGAGAGATCAGGCAATCTACTATGATGCACATATTGTGGAAGTCCAGAGGAGAATGCATGACATTAGGGGCTGCAGGTGTCTTTTCCTGGTTCGTTACGAACACGATAGCACCGAGGAAAAAGTTCGTTTGAGAAGATTATGTCACAGACCGGCACATCGATTCTAAGCTGGAGATATGAATGGTTTGCCACAGAAACTACAATGGGTAATGCTAATTTTGTATGTTCTTTCATAAAGGTGAGGGCATGTTGTGGGTAAAATTTCATAATAGAAGTGGTTTGATTGTTTTCACCTTATTGTTTGTGTATCCATGGCATCTGTAGTTTCTCCCAAAAGCCGTGGGAACAAGCATGGGAGACGCACATGTAATTGTTGCATATTCTATGCCTATCTATGGCAAATTGGGCAAGACACGAGTTCGAACTTTTAGTGGGTTTTAATATCTCTCTCTGCCCATTGCTTGCAAATCTTTAGCCATTTTAAACAGGTCTGTAACAGAGAGAGAGTCTTGAGATCCACTGAGACAACCATAGCCAAAGCTGTGGACTTTCAGAGGGAATTTTGGGACACCTTCAACACTACCACATGGTTCGACCCGAAACTCTCCTTAACCAATTCTATGAGAAAGGTTGCTAGAAAAAGTTTCGAGAAATGAAATTCGAGCAGTTTCGGCTCTTCGATTAAGCACTCTTGAAGCATTAGTTGTGATCCCATAATTAGTCTCGACTTTCTCTTGAATCTCTCAAGATTGTTTGCTTGAGTTCAAAGTTTAGCTTTATAATTGTTGCTAAAACTGGTTTTGTTGCGTAAAAACTATATTTAATAGGAGTGTTCGTGGGTTAGGTAGATCCAACCCAACTTGAACTAACATAATCGGTTTGATTGTTTGAGGTTTTCTTATTCAATCTTAAGTAAAATGTCGTAAAGTAGCTCAAATTTTCGCTTTCAAAAACTTATGAGCTAACACAATCCAT

Coding sequence (CDS)

ATGGAGAAATTGCTAGAGGAATCAGGATTACAGTTGCTTAATAGAGAATTTTGTCAAAAAGTTACCCAAGGTTTCAATCGGTCTTCTGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACAATTGGCTCCAAAGTCGACTGCAAGACTTCCCGAAAAATGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAACGCCCCGAAGGTGAAAAGAGCCCAGATTTATCAGAATTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGGTCAGGCGAAGCTGAAGCGCGAGTCAGATTTGTCGGATTCGGAGCCGAGGAAGACGAATGGGTCAACATAAAACAGGCAGTACGAGTACGCTCTGTCCCTATAGAACATTCAGAGTGTCAAAAGTTGAAGGTTGGGGACATTGTACTCTGCTTCCAGGAGAGGAGAGATCAGGCAATCTACTATGATGCACATATTGTGGAAGTCCAGAGGAGAATGCATGACATTAGGGGCTGCAGGTGTCTTTTCCTGGTTCGTTACGAACACGATAGCACCGAGGAAAAAGTTCGTTTGAGAAGATTATGTCACAGACCGGCACATCGATTCTAA

Protein sequence

MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

Homology

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BLAST of Carg00389 vs. NCBI nr
Match: XP_022940594.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucurbita moschata] >KAG7031732.1 Protein SAWADEE HOMEODOMAIN-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455.7 bits (1171), Expect = 2.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 223

[Close]

BLAST of Carg00389 vs. NCBI nr
Match: XP_022940593.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 455.7 bits (1171), Expect = 2.3e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 23  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 82

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 83  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 142

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 143 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 202

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 203 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 245

[Close]

BLAST of Carg00389 vs. NCBI nr
Match: KAG6608096.1 (Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454.1 bits (1167), Expect = 6.8e-124
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 23  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 82

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIP+ACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 83  SEIPEACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 142

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 143 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 202

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 203 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 245

[Close]

BLAST of Carg00389 vs. NCBI nr
Match: XP_023523536.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.3 bits (1157), Expect = 9.8e-123
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEES LQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 1   MEKLLEESRLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFL SGEAE
Sbjct: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAE 120

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 223

[Close]

BLAST of Carg00389 vs. NCBI nr
Match: XP_023523535.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.3 bits (1157), Expect = 9.8e-123
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEES LQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 23  MEKLLEESRLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 82

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFL SGEAE
Sbjct: 83  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAE 142

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 143 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 202

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 203 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 245

[Close]

BLAST of Carg00389 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.2e-52
Identity = 110/236 (46.61%), Postives = 150/236 (63.56%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEK 60
           ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++ 
Sbjct: 22  MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 81

Query: 61  RMS--------EIPKACPSNKTQES-------SQRPEGEKSPDLSELEFEARSSKDGAWY 120
             S          P +  SN +  +        Q  +G K+ DL++L FEA+S++D AWY
Sbjct: 82  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKG-KASDLADLAFEAKSARDYAWY 141

Query: 121 DVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIV 180
           DV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++
Sbjct: 142 DVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLL 201

Query: 181 LCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP 220
           LCFQER DQA+Y D H++ ++R +HD   C C+FLVRYE D+TEE + L R+C RP
Sbjct: 202 LCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERICRRP 256

[Close]

BLAST of Carg00389 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.7e-48
Identity = 104/251 (41.43%), Postives = 144/251 (57.37%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------- 60
           ME +L +    +  R   + +   F+ S  R GK V+++ +++NW Q+R           
Sbjct: 22  MEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRARGNKA 81

Query: 61  -----LQDFPK----NEKRMSEIPKACP-----SNKTQESSQRPEGEKSP-------DLS 120
                +   P+    N+ R    P + P     +      +  P G   P       D S
Sbjct: 82  PGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGVMRSGSDNS 141

Query: 121 ELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVP 180
            LEFEA+S++DGAWYDV  FL HR L  G+ E +VRF GF  EEDEW+N+K+ VR RS+P
Sbjct: 142 YLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLP 201

Query: 181 IEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEE 220
            E SEC  +  GD+VLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FLVRY HD +EE
Sbjct: 202 CEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEE 261

[Close]

BLAST of Carg00389 vs. ExPASy TrEMBL
Match: A0A6J1FPQ9 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446142 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.1e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 23  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 82

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 83  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 142

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 143 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 202

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 203 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 245

[Close]

BLAST of Carg00389 vs. ExPASy TrEMBL
Match: A0A6J1FKP9 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446142 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.1e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI
Sbjct: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Sbjct: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 223

[Close]

BLAST of Carg00389 vs. ExPASy TrEMBL
Match: A0A6J1J0X4 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480309 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121
Identity = 216/223 (96.86%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLL+ESGLQLLNREFC+KVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 1   MEKLLKESGLQLLNREFCRKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEG+KSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 61  SEIPKACPSNKTQESSQRPEGDKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVP+EHSECQKLKVGD VLCFQERRDQAIYYDAHI
Sbjct: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPLEHSECQKLKVGDSVLCFQERRDQAIYYDAHI 180

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRY HDSTEEKVRLRRLCHRPAH+F
Sbjct: 181 VEVQRRMHDIRGCRCLFLVRYYHDSTEEKVRLRRLCHRPAHQF 223

[Close]

BLAST of Carg00389 vs. ExPASy TrEMBL
Match: A0A6J1J117 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480309 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121
Identity = 216/223 (96.86%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKLL+ESGLQLLNREFC+KVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM
Sbjct: 23  MEKLLKESGLQLLNREFCRKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 82

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQRPEG+KSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE
Sbjct: 83  SEIPKACPSNKTQESSQRPEGDKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 142

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
           ARVRFVGFGAEEDEWVNIKQAVRVRSVP+EHSECQKLKVGD VLCFQERRDQAIYYDAHI
Sbjct: 143 ARVRFVGFGAEEDEWVNIKQAVRVRSVPLEHSECQKLKVGDSVLCFQERRDQAIYYDAHI 202

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFLVRY HDSTEEKVRLRRLCHRPAH+F
Sbjct: 203 VEVQRRMHDIRGCRCLFLVRYYHDSTEEKVRLRRLCHRPAHQF 245

[Close]

BLAST of Carg00389 vs. ExPASy TrEMBL
Match: A0A6J1IMF0 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476568 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112
Identity = 199/223 (89.24%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRM 60
           MEKL+EESG QLL+R+FCQKVT+ FNRSSGRAGKPVIKWMEVY+W +SRLQDFPK EKRM
Sbjct: 23  MEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIEKRM 82

Query: 61  SEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAE 120
           SEIPKACPSNKTQESSQ PEG+K PDLSELEFEARSSKDGAWYDVAMFLTHRFL SGEAE
Sbjct: 83  SEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAE 142

Query: 121 ARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHI 180
            RVRFVGFGAEEDEWVNIKQAVR RSVP+EHSECQK+K GD+VLCFQERRDQAIYYDAHI
Sbjct: 143 VRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHI 202

Query: 181 VEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF 224
           VEVQRRMHDIRGCRCLFL+RY+HDSTEEKVRLRRLC RPAH+F
Sbjct: 203 VEVQRRMHDIRGCRCLFLIRYDHDSTEEKVRLRRLCRRPAHQF 245

[Close]

BLAST of Carg00389 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 205.3 bits (521), Expect = 5.1e-53
Identity = 110/236 (46.61%), Postives = 150/236 (63.56%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEK 60
           ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++ 
Sbjct: 22  MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 81

Query: 61  RMS--------EIPKACPSNKTQES-------SQRPEGEKSPDLSELEFEARSSKDGAWY 120
             S          P +  SN +  +        Q  +G K+ DL++L FEA+S++D AWY
Sbjct: 82  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKG-KASDLADLAFEAKSARDYAWY 141

Query: 121 DVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIV 180
           DV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++
Sbjct: 142 DVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLL 201

Query: 181 LCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP 220
           LCFQER DQA+Y D H++ ++R +HD   C C+FLVRYE D+TEE + L R+C RP
Sbjct: 202 LCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERICRRP 256

[Close]

BLAST of Carg00389 vs. TAIR 10
Match: AT3G18380.1 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 193.0 bits (489), Expect = 2.6e-49
Identity = 104/251 (41.43%), Postives = 144/251 (57.37%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------- 60
           ME +L +    +  R   + +   F+ S  R GK V+++ +++NW Q+R           
Sbjct: 22  MEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRARGNKA 81

Query: 61  -----LQDFPK----NEKRMSEIPKACP-----SNKTQESSQRPEGEKSP-------DLS 120
                +   P+    N+ R    P + P     +      +  P G   P       D S
Sbjct: 82  PGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGVMRSGSDNS 141

Query: 121 ELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVP 180
            LEFEA+S++DGAWYDV  FL HR L  G+ E +VRF GF  EEDEW+N+K+ VR RS+P
Sbjct: 142 YLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLP 201

Query: 181 IEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEE 220
            E SEC  +  GD+VLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FLVRY HD +EE
Sbjct: 202 CEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEE 261

[Close]

BLAST of Carg00389 vs. TAIR 10
Match: AT1G15215.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 192.2 bits (487), Expect = 4.5e-49
Identity = 106/230 (46.09%), Postives = 144/230 (62.61%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEK 60
           ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++ 
Sbjct: 1   MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 60

Query: 61  RMS--------EIPKACPSNKTQES-------SQRPEGEKSPDLSELEFEARSSKDGAWY 120
             S          P +  SN +  +        Q  +G K+ DL++L FEA+S++D AWY
Sbjct: 61  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKG-KASDLADLAFEAKSARDYAWY 120

Query: 121 DVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIV 180
           DV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++
Sbjct: 121 DVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLL 180

Query: 181 LCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLR 214
           LCFQER DQA+Y D H++ ++R +HD   C C+FLVRYE D+TE   R R
Sbjct: 181 LCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTECMFRNR 229

[Close]

BLAST of Carg00389 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 192.2 bits (487), Expect = 4.5e-49
Identity = 106/230 (46.09%), Postives = 144/230 (62.61%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEK 60
           ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++ 
Sbjct: 22  MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 81

Query: 61  RMS--------EIPKACPSNKTQES-------SQRPEGEKSPDLSELEFEARSSKDGAWY 120
             S          P +  SN +  +        Q  +G K+ DL++L FEA+S++D AWY
Sbjct: 82  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKG-KASDLADLAFEAKSARDYAWY 141

Query: 121 DVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIV 180
           DV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++
Sbjct: 142 DVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLL 201

Query: 181 LCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLR 214
           LCFQER DQA+Y D H++ ++R +HD   C C+FLVRYE D+TE   R R
Sbjct: 202 LCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTECMFRNR 250

[Close]

BLAST of Carg00389 vs. TAIR 10
Match: AT3G18380.3 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 189.1 bits (479), Expect = 3.8e-48
Identity = 103/250 (41.20%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 1   MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------- 60
           ME +L +    +  R   + +   F+ S  R GK V+++ +++NW Q+R           
Sbjct: 22  MEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRARGNKA 81

Query: 61  -----LQDFPK----NEKRMSEIPKACPSNKTQESSQRPEGEKSP----------DLSEL 120
                +   P+    N+ R    P + P   T  +   P    +P          D S L
Sbjct: 82  PGKLNVSSMPRMDLPNQMRSVIQPLSVPKT-THMTGNLPGMTPAPSVPGVMRSGSDNSYL 141

Query: 121 EFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIE 180
           EFEA+S++DGAWYDV  FL HR L  G+ E +VRF GF  EEDEW+N+K+ VR RS+P E
Sbjct: 142 EFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCE 201

Query: 181 HSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEK- 220
            SEC  +  GD+VLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FLVRY HD +E++ 
Sbjct: 202 ASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEQEI 261

The following BLAST results are available for this feature:

BLAST of Carg00389 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940594.1	2.3e-124	100.00	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucurbita moschata] >KAG7...	[more]
XP_022940593.1	2.3e-124	100.00	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita moschata]	[more]
KAG6608096.1	6.8e-124	99.55	Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023523536.1	9.8e-123	99.10	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_023523535.1	9.8e-123	99.10	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita pepo subsp. pep...	[more]

BLAST of Carg00389 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI47	7.2e-52	46.61	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]
Q8RWJ7	3.7e-48	41.43	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]

BLAST of Carg00389 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPQ9	1.1e-124	100.00	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1FKP9	1.1e-124	100.00	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1J0X4	3.4e-121	96.86	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1J117	3.4e-121	96.86	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1IMF0	3.8e-112	89.24	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Carg00389 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15215.2	5.1e-53	46.61	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.1	2.6e-49	41.43	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT1G15215.1	4.5e-49	46.09	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	4.5e-49	46.09	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.3	3.8e-48	41.20	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.40		coord: 87..148 e-value: 1.2E-31 score: 110.6
None	No IPR available	GENE3D	2.30.30.140		coord: 149..221 e-value: 2.7E-35 score: 121.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..89
None	No IPR available	PANTHER	PTHR33827:SF3	OS09G0346900 PROTEIN	coord: 1..220
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 89..216 e-value: 2.0E-44 score: 151.0
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00389-RA	Carg00389-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding