CaUC11G218240 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G218240
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	calmodulin-like
Location	Ciama_Chr11: 31886804 .. 31887472 (+)
RNA-Seq Expression	CaUC11G218240
Synteny	CaUC11G218240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAAACAAATACAACATTAGTGTATAACTATGTATATCCCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTAAGTTTATCAAGGAGTATGAAAAAAATGGTGATGGTGTTCAAGTAAAAGCTTTCAATGACGTTGCTCGAGGTTCAACTCAAATCAATAATCAAGAAATGGTATCGAAAATCCTAAAATCGAACGATGATGATACACTCAAGCTTAGTTCAAATGATCATATAAAGCCAACTAAGCAAATAGGAGGAAAAGCTAAAATATCCACCACAAGGGTTCTTGGCGTAAAGTCGTCTAATATGCAATTTAGTCGAGAGGAGATGAAGGAAATTTTTCAATATCATGACGTCAACAATGATGGTTTCCTTGACAGAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTTTTCCATTCTACAAAGCTTGCTACGGAATGTTGTATGCCGATATTAATAAAGATGGTCTTATCAGTGAGATTGAGCTTGACAAACTCATTGATTATGCAAGTAGATTTATCGAGAAGAAATAAGCTGTTAAGCTACTTTCGTTGTAGGTTGGTAATTTGAAATTTGAAGTCTAACCTTTGAAATAATAATTTAAACATATATGATTATTTGAAATAAAGAATTTATCAACTTGTTTATACTT

mRNA sequence

TTAAAAACAAATACAACATTAGTGTATAACTATGTATATCCCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTAAGTTTATCAAGGAGTATGAAAAAAATGGTGATGGTGTTCAAGTAAAAGCTTTCAATGACGTTGCTCGAGGTTCAACTCAAATCAATAATCAAGAAATGGTATCGAAAATCCTAAAATCGAACGATGATGATACACTCAAGCTTAGTTCAAATGATCATATAAAGCCAACTAAGCAAATAGGAGGAAAAGCTAAAATATCCACCACAAGGGTTCTTGGCGTAAAGTCGTCTAATATGCAATTTAGTCGAGAGGAGATGAAGGAAATTTTTCAATATCATGACGTCAACAATGATGGTTTCCTTGACAGAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTTTTCCATTCTACAAAGCTTGCTACGGAATGTTGTATGCCGATATTAATAAAGATGGTCTTATCAGTGAGATTGAGCTTGACAAACTCATTGATTATGCAAGTAGATTTATCGAGAAGAAATAAGCTGTTAAGCTACTTTCGTTGTAGGTTGGTAATTTGAAATTTGAAGTCTAACCTTTGAAATAATAATTTAAACATATATGATTATTTGAAATAAAGAATTTATCAACTTGTTTATACTT

Coding sequence (CDS)

ATGTATATCCCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGTAAGTTTATCAAGGAGTATGAAAAAAATGGTGATGGTGTTCAAGTAAAAGCTTTCAATGACGTTGCTCGAGGTTCAACTCAAATCAATAATCAAGAAATGGTATCGAAAATCCTAAAATCGAACGATGATGATACACTCAAGCTTAGTTCAAATGATCATATAAAGCCAACTAAGCAAATAGGAGGAAAAGCTAAAATATCCACCACAAGGGTTCTTGGCGTAAAGTCGTCTAATATGCAATTTAGTCGAGAGGAGATGAAGGAAATTTTTCAATATCATGACGTCAACAATGATGGTTTCCTTGACAGAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTTTTCCATTCTACAAAGCTTGCTACGGAATGTTGTATGCCGATATTAATAAAGATGGTCTTATCAGTGAGATTGAGCTTGACAAACTCATTGATTATGCAAGTAGATTTATCGAGAAGAAATAA

Protein sequence

MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDTLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

Homology

[Close]

BLAST of CaUC11G218240 vs. NCBI nr
Match: KAA0065465.1 (putative calcium-binding protein CML11 [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 6.5e-58
Identity = 123/172 (71.51%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           MYI KLQASMAMYEA  FIK YEK+GD VQVK FNDV R STQI  Q +V KILKS+DD 
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
             KLS   HI+PT+Q GGK K S  R L +KSSNM FSR+++KEIF+YHD NNDGFL+  
Sbjct: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGS+FPFYKACYGM+YAD N DGLISE ELDKLIDYA++ I+KK
Sbjct: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

[Close]

BLAST of CaUC11G218240 vs. NCBI nr
Match: KAE8648233.1 (hypothetical protein Csa_018371 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 114/156 (73.08%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 10  MAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDTLKLSSNDH 69
           MAMYEAS  IK+YEKNGD V+VKAF+DV R STQI N+E V KILK +D    KL S  H
Sbjct: 1   MAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGVAHKLRSEAH 60

Query: 70  IKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRRELTKAFAFL 129
           I+PT++ GGK K S TRVL  KSSNM  SRE +KEIFQYHD NNDGFL+R ELTKAFAFL
Sbjct: 61  IQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFL 120

Query: 130 GSIFPFYKACYGMLYADINKDGLISEIELDKLIDYA 166
           GS+FPFYKACYGM+YAD N+DGLISE ELDKLIDYA
Sbjct: 121 GSMFPFYKACYGMVYADANEDGLISEAELDKLIDYA 155

[Close]

BLAST of CaUC11G218240 vs. NCBI nr
Match: XP_022930012.1 (calmodulin-2/4-like [Cucurbita moschata])

HSP 1 Score: 201.4 bits (511), Expect = 6.1e-48
Identity = 107/172 (62.21%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           M+IPKLQASMA YEAS+ IK+  +NGD VQ+KAFN +AR STQ+NNQ MV +IL+ N + 
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
             K SSN H+                    K+SNMQFSRE+MKEIF+YHD + DGFL+ R
Sbjct: 61  GPKFSSNTHL--------------------KASNMQFSREQMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKL+DYA +FI+KK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of CaUC11G218240 vs. NCBI nr
Match: XP_023530739.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-47
Identity = 106/172 (61.63%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           M+IPKLQASMA YEAS+ IK+  +NGD VQ+KAFN +AR STQ+NNQ MV +IL+ N + 
Sbjct: 1   MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVNNQGMVPEILRDNKNV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
             K SSN H+                    K+SNMQFSRE+MKEIF+YHD + DGFL+ R
Sbjct: 61  GPKFSSNTHL--------------------KASNMQFSREKMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKL+DYA +F++KK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFMKKK 152

[Close]

BLAST of CaUC11G218240 vs. NCBI nr
Match: XP_022930007.1 (uncharacterized protein LOC111436449 [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-46
Identity = 105/172 (61.05%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           M+I KLQASMA YEAS+ IK+Y +NGD VQ+K+F+D+AR STQ+NNQ  + +ILK N + 
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
            LKLSSN H                     K+S +QFSRE+MKEIF+YHD + DGFL+ R
Sbjct: 61  GLKLSSNAH--------------------PKTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKLIDYA +F++KK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of CaUC11G218240 vs. ExPASy TrEMBL
Match: A0A0A0KMQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.7e-59
Identity = 126/172 (73.26%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           MYI KLQASMAMYEAS  IK+YEKNGD V+VKAF+DV R STQI N+E V KILK +D  
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
             KL S  HI+PT++ GGK K S TRVL  KSSNM  SRE +KEIFQYHD NNDGFL+R 
Sbjct: 61  AHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRM 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGS+FPFYKACYGM+YAD N+DGLISE ELDKLIDYAS+ I+KK
Sbjct: 121 ELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of CaUC11G218240 vs. ExPASy TrEMBL
Match: A0A5A7VI66 (Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001550 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.2e-58
Identity = 123/172 (71.51%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           MYI KLQASMAMYEA  FIK YEK+GD VQVK FNDV R STQI  Q +V KILKS+DD 
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
             KLS   HI+PT+Q GGK K S  R L +KSSNM FSR+++KEIF+YHD NNDGFL+  
Sbjct: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGS+FPFYKACYGM+YAD N DGLISE ELDKLIDYA++ I+KK
Sbjct: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

[Close]

BLAST of CaUC11G218240 vs. ExPASy TrEMBL
Match: A0A0A0KLF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.8e-52
Identity = 112/173 (64.74%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQIN-NQEMVSKILKSNDD 60
           M+IP+LQ S A YEASK +K+YE+NG+GV + AFND ARGSTQIN N+EM +K LK NDD
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 61  DTLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDR 120
              KLSSN  +K   QI GKA++   RV   K+SNMQFSRE++KEIFQY+D + DGFL+ 
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 121 RELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           RE+TKAFA LGSIFPF KA +GM+YAD NKDGLI E ELDKLI+YA++F++KK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]

BLAST of CaUC11G218240 vs. ExPASy TrEMBL
Match: A0A6J1EP72 (calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.0e-48
Identity = 107/172 (62.21%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           M+IPKLQASMA YEAS+ IK+  +NGD VQ+KAFN +AR STQ+NNQ MV +IL+ N + 
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
             K SSN H+                    K+SNMQFSRE+MKEIF+YHD + DGFL+ R
Sbjct: 61  GPKFSSNTHL--------------------KASNMQFSREQMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKL+DYA +FI+KK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of CaUC11G218240 vs. ExPASy TrEMBL
Match: A0A6J1EP67 (uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC111436449 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.3e-47
Identity = 105/172 (61.05%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MYIPKLQASMAMYEASKFIKEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDD 60
           M+I KLQASMA YEAS+ IK+Y +NGD VQ+K+F+D+AR STQ+NNQ  + +ILK N + 
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  TLKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHDVNNDGFLDRR 120
            LKLSSN H                     K+S +QFSRE+MKEIF+YHD + DGFL+ R
Sbjct: 61  GLKLSSNAH--------------------PKTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK 173
           ELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKLIDYA +F++KK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

The following BLAST results are available for this feature:

BLAST of CaUC11G218240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065465.1	6.5e-58	71.51	putative calcium-binding protein CML11 [Cucumis melo var. makuwa]	[more]
KAE8648233.1	1.4e-52	73.08	hypothetical protein Csa_018371 [Cucumis sativus]	[more]
XP_022930012.1	6.1e-48	62.21	calmodulin-2/4-like [Cucurbita moschata]	[more]
XP_023530739.1	3.0e-47	61.63	calmodulin-2/4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930007.1	1.5e-46	61.05	uncharacterized protein LOC111436449 [Cucurbita moschata]	[more]

BLAST of CaUC11G218240 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G218240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMQ1	1.7e-59	73.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1	[more]
A0A5A7VI66	3.2e-58	71.51	Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KLF3	9.8e-52	64.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1	[more]
A0A6J1EP72	3.0e-48	62.21	calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1	[more]
A0A6J1EP67	7.3e-47	61.05	uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]

BLAST of CaUC11G218240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 101..128 e-value: 1.3E-6 score: 27.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 97..132 score: 13.118635
None	No IPR available	GENE3D	1.10.238.10		coord: 19..165 e-value: 1.2E-9 score: 40.3
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 146..158
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 110..122
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 93..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G218240.1	CaUC11G218240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding