Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGAGCAAGAAGCTGGTCGTTTTAGCAATGGCGGTCGTGCTACTTGTGGGCGATTCAGTTGGAGGCACCAACACGTTCACCATTGGCGAGGCGATGGAAGTCAGTTCCGATGAGGTCAACCGAGTGGATAATTCAGAGATGATGGCTGTCCCAAGAAAAATAATGTTGAAAAATAGAGTTGGAGTATGTCTGTTTGTAGGGAAGCCATGCTGGAGTGATGCAGATTGTCCTTCTGGGTGCTATTGCAAACCTCTTCCACTAATAGATGCGGGGTACTGTGGGTTTCTCTGA
mRNA sequence
ATGGAGATGAGCAAGAAGCTGGTCGTTTTAGCAATGGCGGTCGTGCTACTTGTGGGCGATTCAGTTGGAGGCACCAACACGTTCACCATTGGCGAGGCGATGGAAGTCAGTTCCGATGAGGTCAACCGAGTGGATAATTCAGAGATGATGGCTGTCCCAAGAAAAATAATGTTGAAAAATAGAGTTGGAGTATGTCTGTTTGTAGGGAAGCCATGCTGGAGTGATGCAGATTGTCCTTCTGGGTGCTATTGCAAACCTCTTCCACTAATAGATGCGGGGTACTGTGGGTTTCTCTGA
Coding sequence (CDS)
ATGGAGATGAGCAAGAAGCTGGTCGTTTTAGCAATGGCGGTCGTGCTACTTGTGGGCGATTCAGTTGGAGGCACCAACACGTTCACCATTGGCGAGGCGATGGAAGTCAGTTCCGATGAGGTCAACCGAGTGGATAATTCAGAGATGATGGCTGTCCCAAGAAAAATAATGTTGAAAAATAGAGTTGGAGTATGTCTGTTTGTAGGGAAGCCATGCTGGAGTGATGCAGATTGTCCTTCTGGGTGCTATTGCAAACCTCTTCCACTAATAGATGCGGGGTACTGTGGGTTTCTCTGA
Protein sequence
MEMSKKLVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLKNRVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYCGFL
Homology
BLAST of CaUC10G188090 vs. NCBI nr
Match:
KGN52756.1 (hypothetical protein Csa_014977 [Cucumis sativus])
HSP 1 Score: 123.6 bits (309), Expect = 9.2e-25
Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 0
Query: 3 MSKK-LVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLKN- 62
MSKK LVVLAM VLLV +SV T+ TI EA EV+SDEVN+ EM+ PRK+ L+N
Sbjct: 1 MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKA-GLEMIFAPRKLKLRNG 60
Query: 63 --RVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYCGFL 99
R+GVCL VGKPC SDADCPSGCYCKP+PL++ GYCGFL
Sbjct: 61 GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL 99
BLAST of CaUC10G188090 vs. NCBI nr
Match:
KAA0044331.1 (hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa])
HSP 1 Score: 113.2 bits (282), Expect = 1.2e-21
Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = 0
Query: 12 MAVVLLVGDSVGGTNTFTIGEAM-EVSSDEVNRVDNSEMMAVPRKIMLKN---RVGVCLF 71
MA VLLV +SV T+ TI E + EV+SDEVNR ++ A PRK+ LKN R+GVCL
Sbjct: 1 MAFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFA-PRKLKLKNGGPRLGVCLL 60
Query: 72 VGKPCWSDADCPSGCYCKPLPLIDAGYCGFL 99
VGKPC SDADCPSGCYCKP+PL+D GYCGFL
Sbjct: 61 VGKPCMSDADCPSGCYCKPVPLLDIGYCGFL 90
BLAST of CaUC10G188090 vs. NCBI nr
Match:
TYK29460.1 (hypothetical protein E5676_scaffold655G00540 [Cucumis melo var. makuwa])
HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20
Identity = 63/96 (65.62%), Postives = 73/96 (76.04%), Query Frame = 0
Query: 3 MSKK-LVVLAMAVVLLVGDSVGGTNTFTIGEAM-EVSSDEVNRVDNSEMMAVPRKIMLKN 62
MSKK LVVLAMA VLLV +SV T+ TI E + EV+SDEVNR ++ A PRK+ LKN
Sbjct: 1 MSKKALVVLAMAFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFA-PRKLKLKN 60
Query: 63 ---RVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAG 94
R+GVCL VGKPC SDADCPSGCYCKP+PL+D G
Sbjct: 61 GGPRLGVCLLVGKPCMSDADCPSGCYCKPVPLLDIG 95
BLAST of CaUC10G188090 vs. NCBI nr
Match:
TYK29461.1 (hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa])
HSP 1 Score: 71.6 bits (174), Expect = 4.2e-09
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
Query: 3 MSKKLVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLK--- 62
MSKK+ +LAMAV++L+ S G T++ + E +E+ SDE N V + M RK+M +
Sbjct: 5 MSKKVGLLAMAVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMKEGDR 64
Query: 63 --NRVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYC 96
+ G+CL VG PC SD +C SGC CK P++ G C
Sbjct: 65 KGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGIC 101
BLAST of CaUC10G188090 vs. NCBI nr
Match:
KAA0044332.1 (hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 7.1e-09
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0
Query: 3 MSKKLVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLK--- 62
MSKK+ LAMAV++L+ S G T++ + E +E+ SDE N V + M RK+M +
Sbjct: 5 MSKKVGFLAMAVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMKEGDR 64
Query: 63 --NRVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYC 96
+ G+CL VG PC SD +C SGC CK P++ G C
Sbjct: 65 KGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGIC 101
BLAST of CaUC10G188090 vs. ExPASy TrEMBL
Match:
A0A0A0KY29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000770 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 4.5e-25
Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 0
Query: 3 MSKK-LVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLKN- 62
MSKK LVVLAM VLLV +SV T+ TI EA EV+SDEVN+ EM+ PRK+ L+N
Sbjct: 1 MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKA-GLEMIFAPRKLKLRNG 60
Query: 63 --RVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYCGFL 99
R+GVCL VGKPC SDADCPSGCYCKP+PL++ GYCGFL
Sbjct: 61 GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL 99
BLAST of CaUC10G188090 vs. ExPASy TrEMBL
Match:
A0A5A7TRX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00540 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 6.0e-22
Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = 0
Query: 12 MAVVLLVGDSVGGTNTFTIGEAM-EVSSDEVNRVDNSEMMAVPRKIMLKN---RVGVCLF 71
MA VLLV +SV T+ TI E + EV+SDEVNR ++ A PRK+ LKN R+GVCL
Sbjct: 1 MAFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFA-PRKLKLKNGGPRLGVCLL 60
Query: 72 VGKPCWSDADCPSGCYCKPLPLIDAGYCGFL 99
VGKPC SDADCPSGCYCKP+PL+D GYCGFL
Sbjct: 61 VGKPCMSDADCPSGCYCKPVPLLDIGYCGFL 90
BLAST of CaUC10G188090 vs. ExPASy TrEMBL
Match:
A0A5D3E1P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00540 PE=4 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 5.1e-21
Identity = 63/96 (65.62%), Postives = 73/96 (76.04%), Query Frame = 0
Query: 3 MSKK-LVVLAMAVVLLVGDSVGGTNTFTIGEAM-EVSSDEVNRVDNSEMMAVPRKIMLKN 62
MSKK LVVLAMA VLLV +SV T+ TI E + EV+SDEVNR ++ A PRK+ LKN
Sbjct: 1 MSKKALVVLAMAFVLLVANSVRATDIITIDEVIEEVNSDEVNRAGLEKIFA-PRKLKLKN 60
Query: 63 ---RVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAG 94
R+GVCL VGKPC SDADCPSGCYCKP+PL+D G
Sbjct: 61 GGPRLGVCLLVGKPCMSDADCPSGCYCKPVPLLDIG 95
BLAST of CaUC10G188090 vs. ExPASy TrEMBL
Match:
A0A5D3E1J3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00550 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
Query: 3 MSKKLVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLK--- 62
MSKK+ +LAMAV++L+ S G T++ + E +E+ SDE N V + M RK+M +
Sbjct: 5 MSKKVGLLAMAVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMKEGDR 64
Query: 63 --NRVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYC 96
+ G+CL VG PC SD +C SGC CK P++ G C
Sbjct: 65 KGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGIC 101
BLAST of CaUC10G188090 vs. ExPASy TrEMBL
Match:
A0A5A7TM06 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00550 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 3.4e-09
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0
Query: 3 MSKKLVVLAMAVVLLVGDSVGGTNTFTIGEAMEVSSDEVNRVDNSEMMAVPRKIMLK--- 62
MSKK+ LAMAV++L+ S G T++ + E +E+ SDE N V + M RK+M +
Sbjct: 5 MSKKVGFLAMAVLMLMAISAGATSS-EVDEVIELPSDEANMVVATNMEMWSRKMMKEGDR 64
Query: 63 --NRVGVCLFVGKPCWSDADCPSGCYCKPLPLIDAGYC 96
+ G+CL VG PC SD +C SGC CK P++ G C
Sbjct: 65 KGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGIC 101
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN52756.1 | 9.2e-25 | 66.00 | hypothetical protein Csa_014977 [Cucumis sativus] | [more] |
| KAA0044331.1 | 1.2e-21 | 64.84 | hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa] | [more] |
| TYK29460.1 | 1.1e-20 | 65.63 | hypothetical protein E5676_scaffold655G00540 [Cucumis melo var. makuwa] | [more] |
| TYK29461.1 | 4.2e-09 | 42.86 | hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa] | [more] |
| KAA0044332.1 | 7.1e-09 | 42.86 | hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KY29 | 4.5e-25 | 66.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000770 PE=4 SV=1 | [more] |
| A0A5A7TRX6 | 6.0e-22 | 64.84 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3E1P7 | 5.1e-21 | 65.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3E1J3 | 2.0e-09 | 42.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7TM06 | 3.4e-09 | 42.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
