Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAATAGAATTAAAACCTCACAACTCCACCCTTAAACTGGCACAACAACAAATAGGGCTGCAAATTAGTAACCAATACCAAGCTTTAGGGGGAAGAAGAAGTTGCAGGAGGAGGAGATAAAAATGGGATGGAAGGAAATGATGTTGGAATGGTAGGGATTGACGGAAAGTTCGGAAGTGCCATTGTTGGTAGCGGTGGCAACGCTAGCCCGCTCGGGATGTTCACCGGAGAGCTCGGAAGCGGAGGGAGGTTAAGTTTAGGCAATGTGGGTTGTGGTAAATTCGGAAGAGTAGTAGGGTTTGGCAAGGCGGGCAATGGCGGTATCCCGGTTGGGATCACCGGAAGGTTTGGCACCAAGGGGGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTGGATGCTGGAAAGAGCCAAAGTAGCCATGAAGGCAATGATCAAGAACTTGGAAGAAGCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGAAAACGAAACTTTGACTATAAGTATCTTCATTTAG
mRNA sequence
ATGGGAGGAGGAGATAAAAATGGGATGGAAGGAAATGATGTTGGAATGGTAGGGATTGACGGAAAGTTCGGAAGTGCCATTGTTGGTAGCGGTGGCAACGCTAGCCCGCTCGGGATGTTCACCGGAGAGCTCGGAAGCGGAGGGAGGTTAAGTTTAGGCAATGTGGGTTGTGGTAAATTCGGAAGAGTAGTAGGGTTTGGCAAGGCGGGCAATGGCGGTATCCCGGTTGGGATCACCGGAAGGTTTGGCACCAAGGGGGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTGGATGCTGGAAAGAGCCAAAGAAAACGAAACTTTGACTATAAGTATCTTCATTTAG
Coding sequence (CDS)
ATGGGAGGAGGAGATAAAAATGGGATGGAAGGAAATGATGTTGGAATGGTAGGGATTGACGGAAAGTTCGGAAGTGCCATTGTTGGTAGCGGTGGCAACGCTAGCCCGCTCGGGATGTTCACCGGAGAGCTCGGAAGCGGAGGGAGGTTAAGTTTAGGCAATGTGGGTTGTGGTAAATTCGGAAGAGTAGTAGGGTTTGGCAAGGCGGGCAATGGCGGTATCCCGGTTGGGATCACCGGAAGGTTTGGCACCAAGGGGGGAGTGGTTTGCAAAAGATGGCGAGCAGCTTGGCCGAAGTGGATGCTGGAAAGAGCCAAAGAAAACGAAACTTTGACTATAAGTATCTTCATTTAG
Protein sequence
MGGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFGRVVGFGKAGNGGIPVGITGRFGTKGGVVCKRWRAAWPKWMLERAKENETLTISIFI
Homology
BLAST of CaUC10G187500 vs. NCBI nr
Match:
KAG6576875.1 (hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 134.0 bits (336), Expect = 8.2e-28
Identity = 76/112 (67.86%), Postives = 83/112 (74.11%), Query Frame = 0
Query: 2 GGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFG 61
GGGDKNGMEGN+ GMVGID AIVGSGG+A+PLGM TG+LG GNVGCG+FG
Sbjct: 111 GGGDKNGMEGNEAGMVGID-----AIVGSGGSAAPLGMLTGKLGK------GNVGCGRFG 170
Query: 62 RVVGFGKAGNGGIPVGITGRFGTKGGVVCKRWRAAWPKWMLERAKENETLTI 114
R AGNGGIPVG TG+FGTK GVVCKRWRAAWP +LERAK TI
Sbjct: 171 R------AGNGGIPVGTTGKFGTKDGVVCKRWRAAWPMSILERAKVAMKTTI 205
BLAST of CaUC10G187500 vs. NCBI nr
Match:
KAG7014899.1 (hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 134.0 bits (336), Expect = 8.2e-28
Identity = 76/112 (67.86%), Postives = 83/112 (74.11%), Query Frame = 0
Query: 2 GGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFG 61
GGGDKNGMEGN+ GMVGID AIVGSGG+A+PLGM TG+LG GNVGCG+FG
Sbjct: 111 GGGDKNGMEGNEAGMVGID-----AIVGSGGSAAPLGMLTGKLGK------GNVGCGRFG 170
Query: 62 RVVGFGKAGNGGIPVGITGRFGTKGGVVCKRWRAAWPKWMLERAKENETLTI 114
R AGNGGIPVG TG+FGTK GVVCKRWRAAWP +LERAK TI
Sbjct: 171 R------AGNGGIPVGTTGKFGTKDGVVCKRWRAAWPMSILERAKVAMKTTI 205
BLAST of CaUC10G187500 vs. NCBI nr
Match:
XP_022984242.1 (uncharacterized protein LOC111482613 [Cucurbita maxima])
HSP 1 Score: 95.1 bits (235), Expect = 4.2e-16
Identity = 61/114 (53.51%), Postives = 73/114 (64.04%), Query Frame = 0
Query: 1 MGGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKF 60
+ GG KNG +G+ VGM G DGK GS VG+GG A+P+GMF GELGSGG +SLG+ G
Sbjct: 19 VAGGGKNGSDGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGV--L 78
Query: 61 GRVVGFGKAGNGGI--------PVGITGRFGTKGGVVCKRWRAAWPKWMLERAK 107
G VVGFG GN G GI GR G++GG VC+R R A P+ LE AK
Sbjct: 79 GPVVGFGNMGNAGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAK 130
BLAST of CaUC10G187500 vs. NCBI nr
Match:
KAG6576877.1 (hypothetical protein SDJN03_24451, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12
Identity = 57/106 (53.77%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 1 MGGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKF 60
+ GG KNG +G+ VG+ G DGK GS VG+GG A+P GMF GELGSGG +SLG+ G
Sbjct: 19 VAGGGKNGSDGSVVGIDGRDGKVGSEDVGNGGKAAPAGMFIGELGSGGSVSLGSDGI--L 78
Query: 61 GRVVGFGK---AGNGGI-----PVGITGRFGTKGGVVCKRWRAAWP 99
VVGFG AG GG GI GR G+KGG VC+R R A P
Sbjct: 79 DPVVGFGNMGDAGRGGSAHGLGSDGIGGRVGSKGGAVCRRCRVARP 122
BLAST of CaUC10G187500 vs. NCBI nr
Match:
XP_023552841.1 (uncharacterized protein LOC111810367 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 81.6 bits (200), Expect = 4.8e-12
Identity = 54/104 (51.92%), Postives = 64/104 (61.54%), Query Frame = 0
Query: 3 GGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFGR 62
GG KNG +G+ VG+ G DGK GS VG+GG A P GMF GELGSGG +SLG+ G
Sbjct: 21 GGGKNGSDGSVVGIDGRDGKVGSEGVGNGGKAGPAGMFIGELGSGGSVSLGSDGI--LDP 80
Query: 63 VVGFGKAGNGGI--------PVGITGRFGTKGGVVCKRWRAAWP 99
VVGFG GN G GI GR G++GG VC+R + A P
Sbjct: 81 VVGFGNMGNAGRGGSADGLGSDGIGGRVGSEGGAVCRRCQVARP 122
BLAST of CaUC10G187500 vs. ExPASy TrEMBL
Match:
A0A0A0L0M4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 77/98 (78.57%), Postives = 82/98 (83.67%), Query Frame = 0
Query: 9 MEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFGRVVGFGK 68
MEGN++GMVGIDGKFGS IVGSGGNASP +GSGG+L GNVGCG FGR VGFGK
Sbjct: 1 MEGNEIGMVGIDGKFGSVIVGSGGNASP-------IGSGGKLIFGNVGCGNFGR-VGFGK 60
Query: 69 AGNGGIPVGITGRFGTKGGVVCKRWRAAWPKWMLERAK 107
GNGGI VGI GRFGTKGGVVC+RWRAAWPK MLERAK
Sbjct: 61 PGNGGIRVGIAGRFGTKGGVVCERWRAAWPKLMLERAK 90
BLAST of CaUC10G187500 vs. ExPASy TrEMBL
Match:
A0A0A0KYM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 8.5e-31
Identity = 75/98 (76.53%), Postives = 81/98 (82.65%), Query Frame = 0
Query: 9 MEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFGRVVGFGK 68
MEGN++GMVGIDGKFGS IVGSGGN SP + SGG+L+ GNVGCGKFGR VGFGK
Sbjct: 1 MEGNEIGMVGIDGKFGSVIVGSGGNGSP-------IESGGKLTFGNVGCGKFGR-VGFGK 60
Query: 69 AGNGGIPVGITGRFGTKGGVVCKRWRAAWPKWMLERAK 107
GNGGI VGI GRFGTKGGVVC+RWR AWPK MLERAK
Sbjct: 61 PGNGGIRVGIAGRFGTKGGVVCQRWRVAWPKLMLERAK 90
BLAST of CaUC10G187500 vs. ExPASy TrEMBL
Match:
A0A0A0L399 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0
Query: 9 MEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKFGRVVGFGK 68
MEGN++GMVGI G FGS IVGSGGNASP +GSGG+L GNVGCG FGR VGFGK
Sbjct: 1 MEGNEIGMVGIGGNFGSVIVGSGGNASP-------IGSGGKLIFGNVGCGNFGR-VGFGK 60
Query: 69 AGNGGIPVGITGRFGTKGGVVCKRWRAAWPKWMLERAK 107
GNGGI VGI GRFGTKGGVVC+RWRAAWPK MLERAK
Sbjct: 61 PGNGGIRVGIAGRFGTKGGVVCERWRAAWPKLMLERAK 90
BLAST of CaUC10G187500 vs. ExPASy TrEMBL
Match:
A0A6J1J1P5 (uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 2.0e-16
Identity = 61/114 (53.51%), Postives = 73/114 (64.04%), Query Frame = 0
Query: 1 MGGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKF 60
+ GG KNG +G+ VGM G DGK GS VG+GG A+P+GMF GELGSGG +SLG+ G
Sbjct: 19 VAGGGKNGSDGSVVGMDGRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGV--L 78
Query: 61 GRVVGFGKAGNGGI--------PVGITGRFGTKGGVVCKRWRAAWPKWMLERAK 107
G VVGFG GN G GI GR G++GG VC+R R A P+ LE AK
Sbjct: 79 GPVVGFGNMGNAGRGGSADGLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAK 130
BLAST of CaUC10G187500 vs. ExPASy TrEMBL
Match:
A0A5D3E0R8 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00040 PE=3 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 4.0e-12
Identity = 56/110 (50.91%), Postives = 70/110 (63.64%), Query Frame = 0
Query: 2 GGGDKNGM-EGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGELGSGGRLSLGNVGCGKF 61
GGG+KNG +G+ VG+ G DGKFGS +VG GGNA+ +GMF G LGSGG +SLG G GKF
Sbjct: 282 GGGEKNGSDDGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKF 341
Query: 62 GR--VVG-FGKAGNGGIPVGI-TGRFGTKGGVVCKRWRAAWPKWMLERAK 107
G ++G G G GG G+ + G K G+VC+R R LE AK
Sbjct: 342 GMDGILGPVGTGGRGGTADGLGSDGIGGKFGIVCRRCREVRAASTLENAK 391
BLAST of CaUC10G187500 vs. TAIR 10
Match:
AT4G33610.1 (glycine-rich protein )
HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0
Query: 2 GGGDKNGMEGNDVGMVGIDGKFGSAIVGSGGNASPLGMFTGE----LGSGGRLSLGNVGC 61
GGG+KNGM+G VG G+DG+ +VG G G+ G +G+ G++ +G +
Sbjct: 12 GGGEKNGMDGRLVGREGMDGR----LVGREGMD---GILVGREGIVVGNEGKVGIGGIAV 71
Query: 62 GKFGRVVGFGKA---GNGGIPVGITGRFGTKG 87
G GR G GKA GNG I VGI GR G G
Sbjct: 72 GMVGR-FGCGKADGIGNGDIAVGIVGRVGKDG 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6576875.1 | 8.2e-28 | 67.86 | hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7014899.1 | 8.2e-28 | 67.86 | hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022984242.1 | 4.2e-16 | 53.51 | uncharacterized protein LOC111482613 [Cucurbita maxima] | [more] |
| KAG6576877.1 | 1.3e-12 | 53.77 | hypothetical protein SDJN03_24451, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023552841.1 | 4.8e-12 | 51.92 | uncharacterized protein LOC111810367 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L0M4 | 1.0e-31 | 78.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1 | [more] |
| A0A0A0KYM4 | 8.5e-31 | 76.53 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1 | [more] |
| A0A0A0L399 | 2.5e-30 | 76.53 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1 | [more] |
| A0A6J1J1P5 | 2.0e-16 | 53.51 | uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613... | [more] |
| A0A5D3E0R8 | 4.0e-12 | 50.91 | Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G33610.1 | 1.0e-04 | 42.39 | glycine-rich protein | [more] |
