CaUC10G187450 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATTAGAAGTCTTGCGGCGATGCTTTTAGTTGCATTGTTGATTGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTGTCTCCGAGCAAATCACCATCGAAGGCTCCATCAGCGTCTCCGTCTGTTAAGTCGCCGAAATCCTCTCCGGCAGCCGCACCTACTCCGTCCTCTCTGAAGTCTCCACCATCTCCTCCGTCTACATCGCCGTCTACTTCTCCCTCTCCAGCGACCTCTCCTTCCTCGATCTCCTCACCGCCCGCTGATGCTCCTGCTCCGTCAGGTAACGGCGCCGCTTCGATCCCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTGCTATACGCCGTCGTTTTGATGATCTGAGAGCAGTCGGATTTGATTCGTTCTCCGTGTCTGTCTATCTGAGTGATTTATTGTAGCATCTTACTGAGTACATTTTTTCTTGATTTTGTATCTGTTTTTTTTTTCTCCTCTTTTTTTTTCACAGTTATTATCATTATTCTTCATTATCTGA ATGGCTATTAGAAGTCTTGCGGCGATGCTTTTAGTTGCATTGTTGATTGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTGTCTCCGAGCAAATCACCATCGAAGGCTCCATCAGCGTCTCCGTCTGTTAAGTCGCCGAAATCCTCTCCGGCAGCCGCACCTACTCCGTCCTCTCTGAAGTCTCCACCATCTCCTCCGTCTACATCGCCGTCTACTTCTCCCTCTCCAGCGACCTCTCCTTCCTCGATCTCCTCACCGCCCGCTGATGCTCCTGCTCCGTCAGGTAACGGCGCCGCTTCGATCCCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTGCTATACGCCTTATTATCATTATTCTTCATTATCTGA ATGGCTATTAGAAGTCTTGCGGCGATGCTTTTAGTTGCATTGTTGATTGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTGTCTCCGAGCAAATCACCATCGAAGGCTCCATCAGCGTCTCCGTCTGTTAAGTCGCCGAAATCCTCTCCGGCAGCCGCACCTACTCCGTCCTCTCTGAAGTCTCCACCATCTCCTCCGTCTACATCGCCGTCTACTTCTCCCTCTCCAGCGACCTCTCCTTCCTCGATCTCCTCACCGCCCGCTGATGCTCCTGCTCCGTCAGGTAACGGCGCCGCTTCGATCCCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTGCTATACGCCTTATTATCATTATTCTTCATTATCTGA MAIRSLAAMLLVALLIGSAIAQSPAASPSLSPSKSPSKAPSASPSVKSPKSSPAAAPTPSSLKSPPSPPSTSPSTSPSPATSPSSISSPPADAPAPSGNGAASIPFSVFGSVAVVLYALLSLFFII Homology
BLAST of CaUC10G187450 vs. NCBI nr
Match: XP_038877310.1 (classical arabinogalactan protein 1 [Benincasa hispida]) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33 Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of CaUC10G187450 vs. NCBI nr
Match: XP_023542663.1 (classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29 Identity = 94/120 (78.33%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of CaUC10G187450 vs. NCBI nr
Match: XP_022942993.1 (classical arabinogalactan protein 1-like [Cucurbita moschata]) HSP 1 Score: 138.3 bits (347), Expect = 4.7e-29 Identity = 96/120 (80.00%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CaUC10G187450 vs. NCBI nr
Match: KAG7030900.1 (hypothetical protein SDJN02_04937, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.5 bits (345), Expect = 7.9e-29 Identity = 97/126 (76.98%), Postives = 109/126 (86.51%), Query Frame = 0
BLAST of CaUC10G187450 vs. NCBI nr
Match: KGN53727.1 (hypothetical protein Csa_015026 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28 Identity = 95/120 (79.17%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of CaUC10G187450 vs. ExPASy Swiss-Prot
Match: Q8LCN5 (Classical arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=AGP1 PE=2 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11 Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 0
BLAST of CaUC10G187450 vs. ExPASy TrEMBL
Match: A0A6J1FW49 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447861 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 96/120 (80.00%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of CaUC10G187450 vs. ExPASy TrEMBL
Match: A0A0A0KZB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111620 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 5.0e-29 Identity = 95/120 (79.17%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of CaUC10G187450 vs. ExPASy TrEMBL
Match: A0A6J1E9Q3 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430664 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.9e-28 Identity = 98/120 (81.67%), Postives = 103/120 (85.83%), Query Frame = 0
BLAST of CaUC10G187450 vs. ExPASy TrEMBL
Match: A0A6J1J6X2 (classical arabinogalactan protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483108 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28 Identity = 98/120 (81.67%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of CaUC10G187450 vs. ExPASy TrEMBL
Match: A0A6J1JSK4 (classical arabinogalactan protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488535 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27 Identity = 93/120 (77.50%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of CaUC10G187450 vs. TAIR 10
Match: AT5G64310.1 (arabinogalactan protein 1 ) HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12 Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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