CaUC09G177770 (gene) Watermelon (USVL246-FR2) v1

InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Position :
0
Zoom :
x 1
ATGGATGAAGGTGAGGGTGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCCATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGACGAGGATGAATATGAAGACCTGTATAACGATGTTAATGTTGGGGAGGGGTTCCTTCAGTCGTTGAGGAAGAACGATGATTTAGGATTCAAGAGTGAGGAGGAGCCCAAGATGGAGCCTCCTGCACCTGTACCACCCAGTTCCGGTGCTTCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTGGTTTAGGAGATGGTGGGCGCAGTGTTTCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATTTAAGAGCGAATGAGATGGCTATCAGAGGTGGGGTGGGATCGGGGCCGCCTGTGGCCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACAAATGAGTTGGAGGAGCGAAGTAGTAATAACGTAACTGCGCATCAGGGTCAACATCAGCATCAGCAACAACCGCAGACGCAGCCGCAGCCGCAGCACCACCACCCACCTCCTCAGAGCGGAGTCATGGGAAATCCTGGGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATATAGGGAGTGCAGGGGGAAGTGGCGGTGGAACGATCTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAGTCAAAAGGTTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACAGCTTGCAAGGAGGGAATGAATGGGCATATTTTTAATGGACGACCATGTGTTGTTGCATATGCATCCCCTTTTAGTGTTAAGAAGATGGGAGAAGCGCAAGTTAACAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATGTTGTTGGTAAAATTGGTGGAAGTAGCATTGCAACGGGTGGTAACTATCAAGGTGGTGATAACAATAGAGGTTCTGGGAGAGGCAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCGGCTGGCCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCTACCCCTCCTTTGTTGCATCCGCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCCCCTCCTTTTTCTGGAATTTTGTCGTCCTTTCCCCCTGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAGCACGGTGGAGGCAGAGCTGGCGAGTCTAGTTACGGTGAAGAAGCTGGTTCTGACCAGCAATATGGCGAAGGTAGTCATGAAAGAGGTGCGTGGGCCAATTCTGCAAAGGAGAAAGATAGAGGCTCCGAAAGGGATTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGATGTTGGATATGATAGAGAAAGATCCAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGATCGAGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGCCATCATGATCGTGATCGTGAACGTGATAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGATCGGGAACCAGAGCATGAAGAGGATTGGGAAAGGGGACGGTCATCAAGGACTCATAGCAAGTCTCGATTATCACAAGAAGAAGAGAATCGTTCTAGATCAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAG200400600800100012001400160018002000Expect = 3.7E-19 / Score = 79.7Expect = 7.0E-13 / Score = 48.2Score = 13.361938Expect = 4.5E-25 / Score = 90.2Score = Score = Score = Score = Score = Score = Score = Score = Expect = 3.10797E-33 / Score = 120.093Score = Score = SequenceSM00360PF00076PS50102G3DSA:3.30.70.330mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litePTHR23204:SF9cd12372PTHR23204SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 238..311
e-value: 3.7E-19
score: 79.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 239..308
e-value: 7.0E-13
score: 48.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 237..315
score: 13.361938
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 158..332
e-value: 4.5E-25
score: 90.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..107
NoneNo IPR availablePANTHERPTHR23204:SF9CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKEcoord: 1..713
NoneNo IPR availableCDDcd12372RRM_CFIm68_CFIm59coord: 239..312
e-value: 3.10797E-33
score: 120.093
IPR034772CPSF6/7 familyPANTHERPTHR23204CLEAVAGE AND POLYADENYLATION SPECIFIC FACTORcoord: 1..713
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 235..323