CaUC09G177720 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTATATGGCTTAATAAAGTTGACATTTAATTAAAATATTGTTAAACAGAGAAAAAAAAATGATTGTATGGTGATTTTTTTCTTTGTTTTTTTGAGGGAAGGGATCAATCCTCATCTTCATCATTGACTATTCATCCAATGCAAGTTAGGTATAAAGTTGAGGAAACAAAAAGTCCAATATATTAATGCAGGTGCGTTTTTCAAATTAGGGTTTCTATCTCTATATATATTATCGTTTCTGCACTCATTTCATTATTGGACTGTCAACGATCTTTAAATGTTATCTGCTTCTACTCACTCCCTATTTTGTAAGTTCTTCTATCCACTTTGTGATTCTTTCTTGTATTTGAATTTTACTTTTGAATGAATACTAAAAATTAGTGATGGATGAAGGCGAGGGAGGGTGTGGAACAAATTGACCAGTTCCATAGAAATGAAGTGACATCCGTTGTTGTTGATGGAGGGTTTCTTAGGCAAAGATGAAGATAAATATGAGGCCCTATAAAATGATGTTAATGTTAGGGAAGGGTTTCTCTAGTCCTCGAAGAAGAACAATGATTTGGGATATAAGAAGGGGGAGGAGCCGAAGATCAAAATGAGCCTACTTCAGTTGCAGTTGTCGCTCCGATACTTGGGGTTGGCGGTGCTGCGACTAAAGTCGGTGGTCTAGGAGATGGCCCGAGGGTTTCAAAGAGAGTTACAACTGTATTCCGAATTTTAAGAATAAATGAGATGTATACGAGAGGAGGGTTGGGATCTAGGCCTCTGGTGGGTGCTGGAGGTGAAATTAGGGTTAAATTAGGCCAAGGGGATGAATGTAGGAATAATTGCATAAAAAACTTATTTTAAAGGCCCAAAATGGCAAATATCCTAATTTCTTTTTTAAAAAATGACATATAATCCTTAGATGGTGTCATGTCATGACCATGTGAAATTACGGTATTGCCCTTCTTGATATTTTTTTTCTTTTTTTCTTCTCCCCCAGTGTTCGACTCTTCTTCTTTTTTTTTTTTTTTTTCTTTTTCCTTTTTTATCTTCTTCACCGGCATTCGACTCCCTCTCTCTTTCTTTTTTCTTTTTTTCTTCTCCCCCAGCGTTCGACTCTTCTTCTTTTTTTTTTTACTTATTTTTCCCTCTCTTTTTTTTTCTTTTTCCTTTTTTATCTTCTTCACCGGCATTCGACTCCCTCTCTCTTTCTTTTTTCTTTTTTTCCCCTTCTTCTCTAGAAATCCCTCTCTCTTTTTTTCTTCTTTTCCAACTTCTTCTTCTTTGACACGACGAGTCCATACGAGCAGCTCTGACATGACCAACTTCGGTGAGTGAGAGCGAGAGATGGATGAAAGTGATTGGGAGTGAGGAAAGGAAGGGAGAGCGAGATGGGCTTTTCCGTGTGCACAAGTTCATTTTGGTAATTTCATCCGAACTTGACGTCAGCAAAGGGTCATTTGGCATTTTTTTTTTTTTAAAACAGGGTCGTTTGACATTTTAGGCTTAATTTTTAGGTTATCCGTACAAATTTTTCGTAAATTTAATGAATTGGAAGAGAGAAGTAGTAATAATGTAGCTGAGAATCCAGATCCTCACCAACATCATCACTAGCCTCATCATGAAGGAGTTTTAGCAAATGCAAGAAATGTAAAGAGTGAAGGTTTGCTTAGGCAAAGTGGTGGAGTGAAGGTGAATTGA ATGGAAGGGGGAGGAGCCGAAGATCAAAATGAGCCTACTTCAGTTGCAGTTGTCGCTCCGATACTTGGGGTTGGCGGTGCTGCGACTAAAGTCGGTGGTCTAGGAGATGGCCCGAGGGTTTCAAAGAGAGTTACAACTGTATTCCGAATTTTAAGAATAAATGAGATGTATACGAGAGGAGGGTTGGGATCTAGGCCTCTGGTGGGTGCTGGAGGTGAAATTAGGCCTCATCATGAAGGAGTTTTAGCAAATGCAAGAAATGTAAAGAGTGAAGGTTTGCTTAGGCAAAGTGGTGGAGTGAAGGTGAATTGA ATGGAAGGGGGAGGAGCCGAAGATCAAAATGAGCCTACTTCAGTTGCAGTTGTCGCTCCGATACTTGGGGTTGGCGGTGCTGCGACTAAAGTCGGTGGTCTAGGAGATGGCCCGAGGGTTTCAAAGAGAGTTACAACTGTATTCCGAATTTTAAGAATAAATGAGATGTATACGAGAGGAGGGTTGGGATCTAGGCCTCTGGTGGGTGCTGGAGGTGAAATTAGGCCTCATCATGAAGGAGTTTTAGCAAATGCAAGAAATGTAAAGAGTGAAGGTTTGCTTAGGCAAAGTGGTGGAGTGAAGGTGAATTGA MEGGGAEDQNEPTSVAVVAPILGVGGAATKVGGLGDGPRVSKRVTTVFRILRINEMYTRGGLGSRPLVGAGGEIRPHHEGVLANARNVKSEGLLRQSGGVKVN Homology
BLAST of CaUC09G177720 vs. NCBI nr
Match: XP_022981402.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita maxima]) HSP 1 Score: 68.6 bits (166), Expect = 3.7e-08 Identity = 58/148 (39.19%), Postives = 65/148 (43.92%), Query Frame = 0
BLAST of CaUC09G177720 vs. NCBI nr
Match: XP_022941468.1 (uncharacterized protein LOC111446757 [Cucurbita moschata]) HSP 1 Score: 67.8 bits (164), Expect = 6.3e-08 Identity = 57/144 (39.58%), Postives = 64/144 (44.44%), Query Frame = 0
BLAST of CaUC09G177720 vs. NCBI nr
Match: XP_023524756.1 (uncharacterized protein LOC111788596 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 57/150 (38.00%), Postives = 65/150 (43.33%), Query Frame = 0
BLAST of CaUC09G177720 vs. NCBI nr
Match: KAG6607749.1 (Cleavage and polyadenylation specificity factor subunit, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.5 bits (158), Expect = 3.1e-07 Identity = 57/148 (38.51%), Postives = 64/148 (43.24%), Query Frame = 0
BLAST of CaUC09G177720 vs. NCBI nr
Match: XP_038897113.1 (uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida]) HSP 1 Score: 64.3 bits (155), Expect = 7.0e-07 Identity = 51/133 (38.35%), Postives = 59/133 (44.36%), Query Frame = 0
BLAST of CaUC09G177720 vs. ExPASy TrEMBL
Match: A0A6J1ITV5 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita maxima OX=3661 GN=LOC111480534 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08 Identity = 58/148 (39.19%), Postives = 65/148 (43.92%), Query Frame = 0
BLAST of CaUC09G177720 vs. ExPASy TrEMBL
Match: A0A6J1FS69 (uncharacterized protein LOC111446757 OS=Cucurbita moschata OX=3662 GN=LOC111446757 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.1e-08 Identity = 57/144 (39.58%), Postives = 64/144 (44.44%), Query Frame = 0
BLAST of CaUC09G177720 vs. ExPASy TrEMBL
Match: A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.4e-07 Identity = 52/139 (37.41%), Postives = 61/139 (43.88%), Query Frame = 0
BLAST of CaUC09G177720 vs. ExPASy TrEMBL
Match: A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06 Identity = 51/132 (38.64%), Postives = 58/132 (43.94%), Query Frame = 0
BLAST of CaUC09G177720 vs. ExPASy TrEMBL
Match: A0A5D3C9W4 (Putative PE-PGRS family protein PE_PGRS54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00790 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06 Identity = 50/132 (37.88%), Postives = 58/132 (43.94%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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