CaUC09G177680 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTTGGTCCCTGGGGGAGCGAAGACAGTGAGGTCTCGTTTAGATTCTTGAAGTGGTGGAGGTTTGTCGTTGGGCAAACATCAATACAGAACGGGCATTTGCCACAGCTGGGAGGATTCTGGAAACTGTCGCTTTGGCCACAGATGCCAGGTTAGTTATTTCATCCCACCGTAATGATACGATCTGAATTATTAGCTCCACAGATTTATTGGCCTCTATGCAGTATCTTTGTTTATTACTTAAAAGTCAACTTAACTGAGATTCGATTGCTAATTAGACAAATGGATAAAAAAGTTATTCAGTACTATAAGATTAGAAGTTCATGTTCAAGTTTAATGGGTAACTTTTAGATTGAAGTGTTTCTTTATTATTTAATGTGGGTTAATTTTCCAATTATTCTTGTTTCATGTGGGTAGACTGAATTTATTTATCTTTTGAATAGCTTATTGAAATAAACTGAGGCATTAACAGAGTGGTAGATGAATCAATCTCGCTTAGCAAAGGTTTTATGAGAAAGTTCGGAGGCTGATTCAAGGATGGGATATATATCCCACTCTCAATTTTGTTTAGAATTTGGTCTCAGACAATGAACTCAGTTCTAATGCGTTTATGGACAGAGCGAAACAGTAGGTTGGCTGGCAAAATTGATGCACTTATGTATTATCACACCAAGTTGTTAGATTAGCAGATAAATGAACCATTGACTTTTTCAAAAGTTGGATTAATCATAGACTTCGACAAGAGCTCGACATTCCCTTTCAATGGTTGGATTGAGTACCAAATTGAGTTGATTGGAGCACCATGATTCATGACATGAATTTGAAGCCAAAGAAAACATAACACAACTATTTTTTATTTTAATATCCGTGAGTGTTATGACCAACTTATGTGTATCTCGTCATTTGGGTCTAGCTCACAGGACAACCCGTCAGACTGTACAACATTTGAGTGTCAAGGAAACCATAGGGATATTAAACCCTAGGTAAATAGCGACCATGGATTGAATCCATGACCTCTTAGCCCTTTGTCAAGGTCATGCCCATTTACCACTAGGTCAACTCATAATGATTCACAACACAACTAACTTCCAATATCCATTAATTATTGACATTGTGTGCTCTTGATTTATAATAATGGATATATTATTCAATTTCTTCTGTAATTCAATCTTGGGGGACAGGGACTTGGGATTGATCCTCCTCTTTAATACTTTAAATAATTAGGTTGGCAGATATTATTCCAAGAATGGGACGAAAAGCTTGAATTTCTCAAATTTTTTTTATCATCCATATATAATCTAACAATTATAAACCTATAGAATTTGAGTCCAATGATCTAAAATTTAATTGATTAAATATTTTGTTGTTGTTTTTTTTTTTTTTGGTGACTACAACAATTGTGAGGTGAGGATGGAAGACTGAACCTTCCACCTCTAAGATAGAAGTTCATGTCAATTACCATTGAACTAAGCTCACTTTGACAAATATTTTGTTTAGTTACTCATTTCATTTATCTATTCACCAAAAAGATTGGGGTCCTTTGTAATTTTTATGTAATTGTGATGGTGCATTATGGTATATATAGAGAGGAAAGTTCGCACTTAGAACCTCATAGCTATTTTGACACTATGTAAAACTATCATTATACTCAAAATTTTAGCAGTATAGGTTAAATTGCTAATCTTTTCTAATAATATTCTCAACCATACATGTTGAAATTGATGGAAAATAGTTTGATTTGCATTATACGGTGGTTTGATATGGTTTTTTTTTTTTTAATTGTATTTTCTGTTTGCAATTTGCACATAGATAGGAGGACCTTATGCTTACGTTATAGTGCACTTATTGCCTTGAACTTGGTACTGTGCTATGGATGTCTCACCAATTGCAAAATTATCATAGTCCTAATTTGATGGCAGGATTTATCGCAGTTTTCATTTTTTTTTTCATGCTTTTGCCAATCTGCATCGTGGTGCCCTCCCACCATGAAATTCAAGCGTAGATTTGTCGCGATTTTAGAATTAAGTCCAGATCAACCAACCACCCAAAGATGGTTCGCGTAATTTGAAAATTAACGTCATATTTTACTTACAATTCATTCAGATTGCAATCGGAACTCAGTTATTCGCAAAAACTCCCTTACACTAACACCAACCTTCGTCTGAGGAAACATGAATTAGCTCACAGTACCCACACAGTACATACGGAAGATACCAGAAAACGGCCAACAACAACCATTTCAGAAGAAACGTTACTGTGA ATGAAGAATGGTGGAGGTTTGTCGTTGGGCAAACATCAATACAGAACGGGCATTTGCCACAGCTGGGAGGATTCTGGAAACTGTCGCTTTGGCCACAGATGCCAGACAATGAACTCAGTTCTAATGCGTTTATGGACAGAGCGAAACAGTAGGTTGGCTGGCAAAATTGATGCACTTATATTGCAATCGGAACTCAGTTATTCGCAAAAACTCCCTTACACTAACACCAACCTTCGTCTGAGGAAACATGAATTAGCTCACAGTACCCACACAGTACATACGGAAGATACCAGAAAACGGCCAACAACAACCATTTCAGAAGAAACGTTACTGTGA ATGAAGAATGGTGGAGGTTTGTCGTTGGGCAAACATCAATACAGAACGGGCATTTGCCACAGCTGGGAGGATTCTGGAAACTGTCGCTTTGGCCACAGATGCCAGACAATGAACTCAGTTCTAATGCGTTTATGGACAGAGCGAAACAGTAGGTTGGCTGGCAAAATTGATGCACTTATATTGCAATCGGAACTCAGTTATTCGCAAAAACTCCCTTACACTAACACCAACCTTCGTCTGAGGAAACATGAATTAGCTCACAGTACCCACACAGTACATACGGAAGATACCAGAAAACGGCCAACAACAACCATTTCAGAAGAAACGTTACTGTGA MKNGGGLSLGKHQYRTGICHSWEDSGNCRFGHRCQTMNSVLMRLWTERNSRLAGKIDALILQSELSYSQKLPYTNTNLRLRKHELAHSTHTVHTEDTRKRPTTTISEETLL Homology
BLAST of CaUC09G177680 vs. NCBI nr
Match: XP_022974010.1 (uncharacterized protein LOC111472626 isoform X1 [Cucurbita maxima] >XP_022974011.1 uncharacterized protein LOC111472626 isoform X1 [Cucurbita maxima]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. NCBI nr
Match: XP_023536047.1 (mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. NCBI nr
Match: XP_022974000.1 (mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. NCBI nr
Match: XP_022974012.1 (mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. ExPASy TrEMBL
Match: A0A6J1ICU5 (uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. ExPASy TrEMBL
Match: A0A6J1I940 (mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. ExPASy TrEMBL
Match: A0A6J1ICT5 (mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of CaUC09G177680 vs. ExPASy TrEMBL
Match: A0A6J1EQM3 (uncharacterized protein LOC111436579 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436579 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|