CaUC09G177450 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAAATTAAAAAAAAAAAAAAAAATACACACGGAAGTTTATTTGGATAACGCTTGCGACTCTACCAGCAAAAAGCTTCCATTCTTTCAGCTTCCGCCATTGATATACAAAGGAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATTATTCCATCTCCTACTCTATTTAGTCCTTTATCATCCCATTCTTCTAAACCTAAACTTCTTCCCTTCTCTGCTTCATCTTCTACTGCTTTAAAGCTCAAACCCCTTCAATTTTCGTTGCCGTCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCGGATACCATTGAACCGCCTCCGGAAATCCTGGAAGGCTCTGGAGTTGCCACTCTCGAGGTTTGTGATGATTTTGTTCGAAATGGAGCAAAATGTTACAATTTCTCTTTGTTTTGTAATGGGTGTAAGAATTTTTGTTCTTGGGTTTGTTTCCTATTTTTTTGGGGCTGTGGCTCAGGTTGTAATACACTGGTGGTGTTCTAAATTTCCATTTCGTTTCCAATTTCATTGCAAGTAGCTAAGGGATTTCCATTTTATTTCTTTAAGGTAATGGATTGGACAATGTTTGTGTTTTTGTCTAATGTTATGTTCATGTTTAGGGTGAAGATTTTGAGGCGCCTGGGACTTCAGCGCTCAGCATTGGTGAGGATGTGGATAAGGTAAATTTTATGTTGTTCAGATAATGTTTTACTCTAGCTTTTCTTGTGGCTTTCTGAAGATATAAAATGGTCTGCAGAGAAACTTCTGAAACCAAAACCTAACTCTGAAATATATATTAGTTTTGATGAGTAAAGAAAGAGTGGCCAGAAAATATACAATGGAATCGTGTAATGAGATTATATCAGTATCATGATTCATGATCCTGCTAAGTTGACTGAGTAAGGTCATGAGTAAATGGAAAATTTAAATTGTCAGTATCAGTTATAGTTGTAGTGTTGCCTTAAAGGCTAATGACATGTTTGGAGTGTTTCTAAAATGGTTAAAATCACTTTTGTCATTTTCACTCCAAAAAAAATGCTTTTAATTATTCAAAATCAGTTTTAATAGTATGAAAATTGTGTTTAAAAGCGTAAAATTAAATATTGATTTGATTTTGAGTGTTTAAAGGTGTGCTTCGAAGTGATTTTAAACATAATAAAAATGATTTTAACCATTTCAAAATCACTCCAAGTATGCACTAAATAATGTGATGAATGTAATGCAGTATTGAAAGTTCCTAATGTAGTGGGATTGAGTGGAATGTTATGGTTCCATACTCCTTTGTATGCTAAAACAACCTCCTCAACTGGGTAGTGCATAGTTCTCCAATTGTACAATGCCTCTGCGGGCTTAATTTATGTGACTTATTGGCCAAGGCCATAGTTACAAAAAGGCCTAGTGAGCAAAGTCCAAAGAGAGACATTAAACCTGGCCACCTCTCAAAATGGATACCAAGATATTCACTTTGTACCTTTATATTGACAAAATGCCAATATGGTCTTCAGCAGGTCTCAGTGTTGTGTTATTTGATTTGTTTGATTATCTGTGGTATGAGGTGTGTCTAGGGACTTATCTTAGCCAATTGGTTTTGTAATTGATATTTGATAGTGTCCATCCTTTTCTTATGTTTGGCCGATTTTAACGAACTAAAGATGTTTTGGTTTCAGCTGGCGCCAAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAGATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATCTATTGTGTTCTTAAATCCCCTCATGTTCACAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATCGATATTTTGTACCCTACTGCCCAAACAATCGATTCTTTGATGCAACTAGACCTTCCTGCTGGTGTCGACGTCGAGGTCAAGCTATGA GGGAAAATTAAAAAAAAAAAAAAAAATACACACGGAAGTTTATTTGGATAACGCTTGCGACTCTACCAGCAAAAAGCTTCCATTCTTTCAGCTTCCGCCATTGATATACAAAGGAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATTATTCCATCTCCTACTCTATTTAGTCCTTTATCATCCCATTCTTCTAAACCTAAACTTCTTCCCTTCTCTGCTTCATCTTCTACTGCTTTAAAGCTCAAACCCCTTCAATTTTCGTTGCCGTCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCGGATACCATTGAACCGCCTCCGGAAATCCTGGAAGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAGGCGCCTGGGACTTCAGCGCTCAGCATTGGTGAGGATGTGGATAAGCTGGCGCCAAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAGATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATCTATTGTGTTCTTAAATCCCCTCATGTTCACAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATCGATATTTTGTACCCTACTGCCCAAACAATCGATTCTTTGATGCAACTAGACCTTCCTGCTGGTGTCGACGTCGAGGTCAAGCTATGA ATGGCTATTTCTTCACTCTCTGCTACTATTATTCCATCTCCTACTCTATTTAGTCCTTTATCATCCCATTCTTCTAAACCTAAACTTCTTCCCTTCTCTGCTTCATCTTCTACTGCTTTAAAGCTCAAACCCCTTCAATTTTCGTTGCCGTCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCGGATACCATTGAACCGCCTCCGGAAATCCTGGAAGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAGGCGCCTGGGACTTCAGCGCTCAGCATTGGTGAGGATGTGGATAAGCTGGCGCCAAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAGATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATCTATTGTGTTCTTAAATCCCCTCATGTTCACAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATCGATATTTTGTACCCTACTGCCCAAACAATCGATTCTTTGATGCAACTAGACCTTCCTGCTGGTGTCGACGTCGAGGTCAAGCTATGA MAISSLSATIIPSPTLFSPLSSHSSKPKLLPFSASSSTALKLKPLQFSLPSTRVYAAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEAPGTSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL Homology
BLAST of CaUC09G177450 vs. NCBI nr
Match: XP_008462962.2 (PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo]) HSP 1 Score: 387.1 bits (993), Expect = 9.4e-104 Identity = 200/206 (97.09%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CaUC09G177450 vs. NCBI nr
Match: XP_038899555.1 (30S ribosomal protein S10, chloroplastic [Benincasa hispida] >XP_038899556.1 30S ribosomal protein S10, chloroplastic [Benincasa hispida]) HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103 Identity = 199/206 (96.60%), Postives = 200/206 (97.09%), Query Frame = 0
BLAST of CaUC09G177450 vs. NCBI nr
Match: XP_004150471.1 (30S ribosomal protein S10, chloroplastic [Cucumis sativus] >XP_011651997.1 30S ribosomal protein S10, chloroplastic [Cucumis sativus] >XP_031744994.1 30S ribosomal protein S10, chloroplastic [Cucumis sativus] >KAE8645988.1 hypothetical protein Csa_015449 [Cucumis sativus]) HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101 Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of CaUC09G177450 vs. NCBI nr
Match: XP_022940678.1 (30S ribosomal protein S10, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 369.4 bits (947), Expect = 2.0e-98 Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of CaUC09G177450 vs. NCBI nr
Match: KAG7037344.1 (30S ribosomal protein S10, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98 Identity = 191/206 (92.72%), Postives = 195/206 (94.66%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy Swiss-Prot
Match: Q9M4Y3 (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 GN=RPS10 PE=2 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 9.9e-64 Identity = 144/212 (67.92%), Postives = 158/212 (74.53%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy Swiss-Prot
Match: Q9LK61 (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS10 PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.7e-61 Identity = 138/212 (65.09%), Postives = 162/212 (76.42%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy Swiss-Prot
Match: P82162 (30S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS10 PE=1 SV=2) HSP 1 Score: 218.0 bits (554), Expect = 9.9e-56 Identity = 135/215 (62.79%), Postives = 150/215 (69.77%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy Swiss-Prot
Match: P17009 (Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa OX=2762 GN=rps10 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.0e-33 Identity = 65/98 (66.33%), Postives = 86/98 (87.76%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy Swiss-Prot
Match: B7K833 (30S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=rpsJ PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32 Identity = 62/100 (62.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy TrEMBL
Match: A0A1S3CI46 (30S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 4.6e-104 Identity = 200/206 (97.09%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy TrEMBL
Match: A0A0A0LEH6 (Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G769090 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 5.6e-102 Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy TrEMBL
Match: A0A6J1FPZ5 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446197 PE=3 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 9.8e-99 Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy TrEMBL
Match: A0A6J1F6U3 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442692 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98 Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0
BLAST of CaUC09G177450 vs. ExPASy TrEMBL
Match: A0A6J1J2J9 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480677 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98 Identity = 190/206 (92.23%), Postives = 194/206 (94.17%), Query Frame = 0
BLAST of CaUC09G177450 vs. TAIR 10
Match: AT3G13120.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 236.5 bits (602), Expect = 1.9e-62 Identity = 138/212 (65.09%), Postives = 162/212 (76.42%), Query Frame = 0
BLAST of CaUC09G177450 vs. TAIR 10
Match: AT3G13120.2 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 236.5 bits (602), Expect = 1.9e-62 Identity = 138/212 (65.09%), Postives = 162/212 (76.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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