CaUC09G162200 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G162200
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCCHC-type domain-containing protein
LocationCiama_Chr09: 4202504 .. 4203887 (+)
RNA-Seq ExpressionCaUC09G162200
SyntenyCaUC09G162200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTATGATTTTTTTAATGCATATGATTGTTGAGCCCAATAGATATGATAATTGACATCAATAAGTTGCAACCATTAGGGGTGGAGGTGGTTACACATTGAACTGGTGGTTTATTTCATTTATAGAATGAGATGCATGTGTACTCATTAAGAAGGCAAAATGCATTTTTGGTTCCTCAAGTTTGAAGTTGATATCTATTTAGTCATCGAGGTTTCAAATGATGCACTTTAATCCCCTTGGTTTGCAAAATAATTATAAATGACTCCTACCTTAACTTCAAAGTAACAAAATGCTTATTAGACTGTTAAGTGATGATGTAGATAGGATGACAAATGAGTTCGTTTAACAAATCATTTGGAGCTTGTCTTCTTCAAGATTCCTCCAAGATCCTCGTCGACTAAGGGTGTCGTCAGCCGTGGTGCTGCAAGTTGTGTTTGGTTCCCCTGCTGTTAAGGAGGGGTTTTTCTTTGTTTGATTACGTAATAAATAAGTGAGGGAGAGTATCCCCGGTGACATTTTTCTGGAAATTCACATTGTGAAGTGTAAGAAGAAGGGTGTTTCTGATGGCGGAACTTAAAGATCTTTCAGAAGATTGGAGGAAACTTCGTTTAACTAAAGAAGAAAATGATGTTCGAATTGATTATGACTCCCAAATGGACAACATAATTAGCAGGCAGATGGAATATTGTTTAATCAACAAGTTGCTATCCACACGAAGAATTGTTCTTGGAATCATTAAAAATACATTCGCAAATGCTTGGAGGTCGAACCTGGAATTCAATGTTGAAGGTTTAGGGAGGAATCTATTTCTGGTCAAGTTTGACACCAAAAAAGATAAAGAAATGGTCCTGCGCCTTTGTCCTTGGTGTTTTGATAATTTTTTACTGGCTTTGGAGGATCCGAAAGTTAACATCAGATTATCTCGTTTAGTCTTTGATAAAGTGGCTTTTTGGATCAGATTGCTAGATATTCCTCTTGGATTCCAGAACAAATATATGGCAAAAAAGGTGGGGGATGCAATTGGCAAATTTTTGGAAGTTGATTCTAATCAAGATATTTTTGTTGGGGAGAGAGTCTAAGGATTAAGATTCTGATTGACATCACCAAGTCGTTGAGACGTGGAATTTGGATTAAACCAGGGGAAGACCAAGAAAGAATGTGGATCAATATCAGGTATAAAAGGCTCCCTGATTTCTGCTATGGTTGTGGTCATATAGGCCATACAATCAAAGAATGTAAAGAGAGGGTGGGAGACTCTGATGCCGAAGTTGATCCGGGGAAATGGCAGTTTGGTGGATGGCTGAGATTTAAGGGTAATAATATAAGAAGAAGGAGGAAAAATTCACCACGGAGGAATGAGAAAGAGGGTTCCTTCGCATAA

mRNA sequence

ATGAGATTCCTCCAAGATCCTCGTCGACTAAGGGTGTCGTCAGCCGTGGTGCTGCAAGTTGTGTTTGGTTCCCCTGCTGTTAAGGAGGGTGTAAGAAGAAGGGTGTTTCTGATGGCGGAACTTAAAGATCTTTCAGAAGATTGGAGGAAACTTCGTTTAACTAAAGAAGAAAATGATGTTCGAATTGATTATGACTCCCAAATGGACAACATAATTAGCAGGCAGATGGAATATTGTTTAATCAACAAGTTGCTATCCACACGAAGAATTGTTCTTGGAATCATTAAAAATACATTCGCAAATGCTTGGAGGTCGAACCTGGAATTCAATGTTGAAGGTTTAGGGAGGAATCTATTTCTGGTCAAGTTTGACACCAAAAAAGATAAAGAAATGGTCCTGCGCCTTTGTCCTTGGTGTTTTGATAATTTTTTACTGGCTTTGGAGGATCCGAAAGTTAACATCAGATTATCTCGTTTAGTCTTTGATAAAGTGGCTTTTTGGATCAGATTGCTAGATATTCCTCTTGGATTCCAGAACAAATATATGGCAAAAAAGAGTCTAAGGATTAAGATTCTGATTGACATCACCAAGTCGTTGAGACGTGGAATTTGGATTAAACCAGGGGAAGACCAAGAAAGAATGTGGATCAATATCAGGTATAAAAGGCTCCCTGATTTCTGCTATGGTTGTGGTCATATAGGCCATACAATCAAAGAATGTAAAGAGAGGGTGGGAGACTCTGATGCCGAAGTTGATCCGGGGAAATGGCAGTTTGGTGGATGGCTGAGATTTAAGGGTAATAATATAAGAAGAAGGAGGAAAAATTCACCACGGAGGAATGAGAAAGAGGGTTCCTTCGCATAA

Coding sequence (CDS)

ATGAGATTCCTCCAAGATCCTCGTCGACTAAGGGTGTCGTCAGCCGTGGTGCTGCAAGTTGTGTTTGGTTCCCCTGCTGTTAAGGAGGGTGTAAGAAGAAGGGTGTTTCTGATGGCGGAACTTAAAGATCTTTCAGAAGATTGGAGGAAACTTCGTTTAACTAAAGAAGAAAATGATGTTCGAATTGATTATGACTCCCAAATGGACAACATAATTAGCAGGCAGATGGAATATTGTTTAATCAACAAGTTGCTATCCACACGAAGAATTGTTCTTGGAATCATTAAAAATACATTCGCAAATGCTTGGAGGTCGAACCTGGAATTCAATGTTGAAGGTTTAGGGAGGAATCTATTTCTGGTCAAGTTTGACACCAAAAAAGATAAAGAAATGGTCCTGCGCCTTTGTCCTTGGTGTTTTGATAATTTTTTACTGGCTTTGGAGGATCCGAAAGTTAACATCAGATTATCTCGTTTAGTCTTTGATAAAGTGGCTTTTTGGATCAGATTGCTAGATATTCCTCTTGGATTCCAGAACAAATATATGGCAAAAAAGAGTCTAAGGATTAAGATTCTGATTGACATCACCAAGTCGTTGAGACGTGGAATTTGGATTAAACCAGGGGAAGACCAAGAAAGAATGTGGATCAATATCAGGTATAAAAGGCTCCCTGATTTCTGCTATGGTTGTGGTCATATAGGCCATACAATCAAAGAATGTAAAGAGAGGGTGGGAGACTCTGATGCCGAAGTTGATCCGGGGAAATGGCAGTTTGGTGGATGGCTGAGATTTAAGGGTAATAATATAAGAAGAAGGAGGAAAAATTCACCACGGAGGAATGAGAAAGAGGGTTCCTTCGCATAA

Protein sequence

MRFLQDPRRLRVSSAVVLQVVFGSPAVKEGVRRRVFLMAELKDLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANAWRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVFDKVAFWIRLLDIPLGFQNKYMAKKSLRIKILIDITKSLRRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFGGWLRFKGNNIRRRRKNSPRRNEKEGSFA
Homology
BLAST of CaUC09G162200 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-39
Identity = 98/271 (36.16%), Postives = 143/271 (52.77%), Query Frame = 0

Query: 42  KDLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFAN 101
           ++L  DW+K +LT EE+++ +D D     +  + + Y L+ KLL+ R I   ++      
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 102 AWRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVF 161
           AW+   +  VE +G+NLFL  F  + D   V++  PW FD  L+ L+ P  +  +S L F
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 162 DKVAFWIRLLDIPLGFQNKYMAKK----------------------SLRIKILIDITKSL 221
           ++VAFWI L D+P+ + NK MA +                      SLRI++LIDITK L
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 222 RRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKER--VGDSDAEVDPGKWQ 281
           RRGI I         WI I+Y+RLPDFCY CG IGH+  +C  R      D+       +
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS---E 243

Query: 282 FGGWLRFKGNNI---RRRRKNSPRRNEKEGS 286
           +G WLRF G+     + R+  SP R +  GS
Sbjct: 244 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGS 271

BLAST of CaUC09G162200 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-32
Identity = 81/248 (32.66%), Postives = 129/248 (52.02%), Query Frame = 0

Query: 43  DLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANA 102
           +L E+W+  +LT EE+ + +D DS       + +E  LI KLLS R I   ++KNT   A
Sbjct: 5   NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64

Query: 103 WRSNLE-FNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVF 162
           W+ + + F+V+ +G N+FL  F+   D+  +LR+ PW FD  L+ +++P    +   + F
Sbjct: 65  WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124

Query: 163 DKVAFWIRLLDIPLGFQNKYMAKK----------------------SLRIKILIDITKSL 222
             V+ W+   D+ L   NK MA +                       LR+++  D+ K L
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPL 184

Query: 223 RRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFG 268
            RGI +         WI I+Y+RLPDF Y CG + H +K+C +   DS ++      Q+G
Sbjct: 185 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK----NLQYG 244

BLAST of CaUC09G162200 vs. NCBI nr
Match: TXG48504.1 (hypothetical protein EZV62_024379 [Acer yangbiense])

HSP 1 Score: 150.2 bits (378), Expect = 2.7e-32
Identity = 80/245 (32.65%), Postives = 133/245 (54.29%), Query Frame = 0

Query: 40  ELKDLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTF 99
           ELK+L++    L LT E++++   +   ++N   + + +CL+ K+LS+RR+     K   
Sbjct: 2   ELKELAKLCENLSLTDEDSEIHQVFGG-IENEGVKDVHHCLVGKVLSSRRVNREAFKTII 61

Query: 100 ANAWRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRL 159
              W      ++E +G+N FL  F   +D+  + R  PW FD  LLALE  +    +S+L
Sbjct: 62  EQIWSPFGTVDIEAVGKNTFLFYFANPEDRNRIWRRGPWHFDRHLLALEKLEGTGNISQL 121

Query: 160 VFDKVAFWIRLLDIPLGFQNKYMAK---------------------KSLRIKILIDITKS 219
            F K  FW+++ DIP+   N+ MAK                     K LR+K+LIDI++ 
Sbjct: 122 SFSKAEFWVQIHDIPIMCMNRCMAKWLAAQIGDIIEIPSKSRECWGKFLRVKVLIDISRP 181

Query: 220 LRRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQF 264
           L+R + +K  +    + +N++Y+RLP+FCY CG +GH+I +C + V    A V+    +F
Sbjct: 182 LKRWLRLKLDQSDNIVMVNLKYERLPEFCYACGRLGHSIGDCND-VEAKKAAVEGPITKF 241

BLAST of CaUC09G162200 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-30
Identity = 82/247 (33.20%), Postives = 117/247 (47.37%), Query Frame = 0

Query: 43  DLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANA 102
           DL E+W+  +LT EE +  ID D+        ++E  L+ KL   R I   ++KNT   A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 103 WR-SNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVF 162
           W+  N  F V+ LG NLFL  F    D+  + +  PW FD  L+ +  P   I  S L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 163 DKVAFWIRLLDIPLGFQNKYMAKK----------------------SLRIKILIDITKSL 222
            K+  W+R  D+PLG   + MA +                      +LR+++++DI+K L
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 223 RRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFG 267
           RRGI +         WI I+Y+RLPDFCY CG                       K Q+G
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG-----------------LSSSRKKHQYG 234

BLAST of CaUC09G162200 vs. NCBI nr
Match: TXG68535.1 (hypothetical protein EZV62_003470 [Acer yangbiense])

HSP 1 Score: 142.9 bits (359), Expect = 4.3e-30
Identity = 76/242 (31.40%), Postives = 125/242 (51.65%), Query Frame = 0

Query: 43  DLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANA 102
           DL+     L +  E+N+VR      +D      +++CL+ K+LS +R+     K      
Sbjct: 5   DLARLCENLSIKDEDNEVR-QVSEGIDRDGVEDVDHCLVGKVLSGKRVNREAFKTVIEQL 64

Query: 103 WRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVFD 162
           W       +E +G N F+  F+  +D++ + +  PW FD  L+ LE P+    +S+L F+
Sbjct: 65  WSPFGNVEIEVVGDNTFMFYFNNPEDRDRIWQRGPWHFDRSLIVLEKPEGMGDISQLCFN 124

Query: 163 KVAFWIRLLDIPLGFQNKYMAK---------------------KSLRIKILIDITKSLRR 222
           K  FW+++ DIP+   NK MAK                     K LR+K+LIDI+K L+R
Sbjct: 125 KAEFWVQIHDIPIMCMNKRMAKWLAEQIGRVVEIPMESRECWGKFLRVKVLIDISKPLKR 184

Query: 223 GIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFGGW 264
            + +K       + + ++Y+RLP+FCY CG +GH I +C +     +A ++  K +FG W
Sbjct: 185 WLRLKLDRSDNIVVVGLKYERLPEFCYACGKVGHGINKCTDTEAKKEA-IEGPKTKFGSW 244

BLAST of CaUC09G162200 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 98/271 (36.16%), Postives = 143/271 (52.77%), Query Frame = 0

Query: 42  KDLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFAN 101
           ++L  DW+K +LT EE+++ +D D     +  + + Y L+ KLL+ R I   ++      
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 102 AWRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVF 161
           AW+   +  VE +G+NLFL  F  + D   V++  PW FD  L+ L+ P  +  +S L F
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 162 DKVAFWIRLLDIPLGFQNKYMAKK----------------------SLRIKILIDITKSL 221
           ++VAFWI L D+P+ + NK MA +                      SLRI++LIDITK L
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPL 183

Query: 222 RRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKER--VGDSDAEVDPGKWQ 281
           RRGI I         WI I+Y+RLPDFCY CG IGH+  +C  R      D+       +
Sbjct: 184 RRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS---E 243

Query: 282 FGGWLRFKGNNI---RRRRKNSPRRNEKEGS 286
           +G WLRF G+     + R+  SP R +  GS
Sbjct: 244 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGS 271

BLAST of CaUC09G162200 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-32
Identity = 81/248 (32.66%), Postives = 129/248 (52.02%), Query Frame = 0

Query: 43  DLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANA 102
           +L E+W+  +LT EE+ + +D DS       + +E  LI KLLS R I   ++KNT   A
Sbjct: 5   NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64

Query: 103 WRSNLE-FNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVF 162
           W+ + + F+V+ +G N+FL  F+   D+  +LR+ PW FD  L+ +++P    +   + F
Sbjct: 65  WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124

Query: 163 DKVAFWIRLLDIPLGFQNKYMAKK----------------------SLRIKILIDITKSL 222
             V+ W+   D+ L   NK MA +                       LR+++  D+ K L
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPL 184

Query: 223 RRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFG 268
            RGI +         WI I+Y+RLPDF Y CG + H +K+C +   DS ++      Q+G
Sbjct: 185 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK----NLQYG 244

BLAST of CaUC09G162200 vs. ExPASy TrEMBL
Match: A0A5C7GUN2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024379 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-32
Identity = 80/245 (32.65%), Postives = 133/245 (54.29%), Query Frame = 0

Query: 40  ELKDLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTF 99
           ELK+L++    L LT E++++   +   ++N   + + +CL+ K+LS+RR+     K   
Sbjct: 2   ELKELAKLCENLSLTDEDSEIHQVFGG-IENEGVKDVHHCLVGKVLSSRRVNREAFKTII 61

Query: 100 ANAWRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRL 159
              W      ++E +G+N FL  F   +D+  + R  PW FD  LLALE  +    +S+L
Sbjct: 62  EQIWSPFGTVDIEAVGKNTFLFYFANPEDRNRIWRRGPWHFDRHLLALEKLEGTGNISQL 121

Query: 160 VFDKVAFWIRLLDIPLGFQNKYMAK---------------------KSLRIKILIDITKS 219
            F K  FW+++ DIP+   N+ MAK                     K LR+K+LIDI++ 
Sbjct: 122 SFSKAEFWVQIHDIPIMCMNRCMAKWLAAQIGDIIEIPSKSRECWGKFLRVKVLIDISRP 181

Query: 220 LRRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQF 264
           L+R + +K  +    + +N++Y+RLP+FCY CG +GH+I +C + V    A V+    +F
Sbjct: 182 LKRWLRLKLDQSDNIVMVNLKYERLPEFCYACGRLGHSIGDCND-VEAKKAAVEGPITKF 241

BLAST of CaUC09G162200 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.2e-31
Identity = 82/247 (33.20%), Postives = 117/247 (47.37%), Query Frame = 0

Query: 43  DLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANA 102
           DL E+W+  +LT EE +  ID D+        ++E  L+ KL   R I   ++KNT   A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 103 WR-SNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVF 162
           W+  N  F V+ LG NLFL  F    D+  + +  PW FD  L+ +  P   I  S L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 163 DKVAFWIRLLDIPLGFQNKYMAKK----------------------SLRIKILIDITKSL 222
            K+  W+R  D+PLG   + MA +                      +LR+++++DI+K L
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 223 RRGIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFG 267
           RRGI +         WI I+Y+RLPDFCY CG                       K Q+G
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG-----------------LSSSRKKHQYG 234

BLAST of CaUC09G162200 vs. ExPASy TrEMBL
Match: A0A5C7IHI0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003470 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30
Identity = 76/242 (31.40%), Postives = 125/242 (51.65%), Query Frame = 0

Query: 43  DLSEDWRKLRLTKEENDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANA 102
           DL+     L +  E+N+VR      +D      +++CL+ K+LS +R+     K      
Sbjct: 5   DLARLCENLSIKDEDNEVR-QVSEGIDRDGVEDVDHCLVGKVLSGKRVNREAFKTVIEQL 64

Query: 103 WRSNLEFNVEGLGRNLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVFD 162
           W       +E +G N F+  F+  +D++ + +  PW FD  L+ LE P+    +S+L F+
Sbjct: 65  WSPFGNVEIEVVGDNTFMFYFNNPEDRDRIWQRGPWHFDRSLIVLEKPEGMGDISQLCFN 124

Query: 163 KVAFWIRLLDIPLGFQNKYMAK---------------------KSLRIKILIDITKSLRR 222
           K  FW+++ DIP+   NK MAK                     K LR+K+LIDI+K L+R
Sbjct: 125 KAEFWVQIHDIPIMCMNKRMAKWLAEQIGRVVEIPMESRECWGKFLRVKVLIDISKPLKR 184

Query: 223 GIWIKPGEDQERMWINIRYKRLPDFCYGCGHIGHTIKECKERVGDSDAEVDPGKWQFGGW 264
            + +K       + + ++Y+RLP+FCY CG +GH I +C +     +A ++  K +FG W
Sbjct: 185 WLRLKLDRSDNIVVVGLKYERLPEFCYACGKVGHGINKCTDTEAKKEA-IEGPKTKFGSW 244

BLAST of CaUC09G162200 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 6.0e-06
Identity = 51/221 (23.08%), Postives = 86/221 (38.91%), Query Frame = 0

Query: 58  NDVRIDYDSQMDNIISRQMEYCLINKLLSTRRIVLGIIKNTFANAW-RSNLEFNVEGLGR 117
           +D+       + N    +  + L  + +  RR  L  I  +    W +S L       GR
Sbjct: 112 DDIPFALPEDIVNHAVAENRFILFGRPVMPRRQNLRSIVASMPRIWGQSGLVHGRIMEGR 171

Query: 118 NLFLVKFDTKKDKEMVLRLCPWCFDNFLLALEDPKVNIRLSRLVFDKVAFWIRLLDIPLG 177
               + F  ++  E VLR  PW F+++++ L+  +  I L    F  + FW+++  IP  
Sbjct: 172 QFHFI-FTLEESLETVLRRGPWAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQ 231

Query: 178 FQNKYMAK----------------------KSLRIKILIDITKSLR--RGIWIKPGEDQE 237
           F N+ + +                         R+ +  DIT  LR  R      G +  
Sbjct: 232 FLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVN-- 291

Query: 238 RMWINIRYKRLPDFCYGCGHIGHTIKECK-ERVGDSDAEVD 253
              +  RY+RL  FC  CG + H    C  +  G+  A+ D
Sbjct: 292 -TLLRFRYERLRGFCEVCGMLTHDFGACLIQNGGEEQADDD 324

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.12.3e-3936.16uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.12.1e-3232.66uncharacterized protein LOC111005481 [Momordica charantia][more]
TXG48504.12.7e-3232.65hypothetical protein EZV62_024379 [Acer yangbiense][more]
XP_022158377.11.5e-3033.20uncharacterized protein LOC111024874 [Momordica charantia][more]
TXG68535.14.3e-3031.40hypothetical protein EZV62_003470 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU551.1e-3936.16uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ11.0e-3232.66uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A5C7GUN21.3e-3232.65CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02437... [more]
A0A6J1DX307.2e-3133.20uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5C7IHI02.1e-3031.40CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00347... [more]
Match NameE-valueIdentityDescription
AT3G31430.16.0e-0623.08unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 74..183
e-value: 1.6E-14
score: 53.6
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 193..241
e-value: 3.3E-12
score: 45.9
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 186..242
coord: 52..184
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 186..242
coord: 52..184
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 227..242
score: 9.405477

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G162200.1CaUC09G162200.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding