CaUC06G113420 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G113420
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transcription factor bHLH92
Location	Ciama_Chr06: 8318037 .. 8319482 (+)
RNA-Seq Expression	CaUC06G113420
Synteny	CaUC06G113420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATCCCCTCTCTTCTCTCCTCATTTCCTCCCATGAGACCGTTGCAAGATCTGAACTGAATTTTGAAAAGAAGAAAAACTTGATCACCCAACTGATATATGGATCATACTTTTCCTGCGGAATTCTGGCATAGCGATTTCTTTTGGCTCGACGCTCCCATTTCCGTCCCCGCCGCCGGTCCTGCGAGACAGATAAGTGCTTTCGTACCATATGATCCGTCTCAAGTGGCTACCGGATTGGGACAAGAAAAAAATCCGACAACTACCACCGTCACCACGAGCTATAATTCTAGGAATGTCAACAAGAGGATGGTTGAGTATTGGAGGAAGCATTGGCATGAAAAGAAAGAAACAAGTCCCCTAGGGGAATTAGAGAGAGAAAAATGTCACCGTCACATGTTGAACGAGAGGATGAGAAGAGAGAAACAGAAACAGAGTTATTTGGCACTCCACTCCATGCTCCCCAAAAATACTAAGGTAGGATATATAAACTCCATGCATGTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTCTTTCAGCGTCCAAATTTAGTAGTGTTTGTCATTGTTTTTCCGTAGAACGATAAGAATTCGATCGTTCAAAGTGCGGCGAGAGCAATACAAGAAATGAAAGCCTTAGAGGAGATTTTAAAGAGGAGAAACTTAGAGTTGGAGATGGCAATAGCAAGGAAGAAGAAAGAAAAGGAAAAAGAGACAACACCAATAATAAGTGTAGCATTGTCCAATCCTTCTTGTGGGATCAACTCAATGCTGGCTGTTCTCAATGTTCTCAAAACTGTTGGAGTAAATTCCAAAGCCATTCATGCCACTTTCGTCAACTCTCAGTTTTCAGCCCAATTAGCCATTGATACCCATGTAAGAATACTAACCCCTCTTCTCAAATTTACGACAGAAAAATTATCATAATTTCAAAAAATATAACTTGTTGGGATAAATCTATTCGAATATCTCTGCATATCTCCTAGCTCATTCGATATCATTAATTACGAGGTTGGGGTCCAATAATTTATTTATTTTTATTACTTTTTTTAAAAGAGATTTTGTTGTTTGTTTGGTTGAGATTTGTAGATGGGAGCTGCCGAAGTAGAAAGAGCATTGCAGGTGACGCTAAACGAAGCTGAGAGGAAATTTCAAAGGCAATGCATGGAAGGGTCCAAACAAATAAAAGAGAGCCATTTTAATTTTAATAATAATAAAGGGGCCCACGAGGTGGGTCCAGAATTTCAATTTTAAATAGCCACGTGGGCACGTGGGAAATAAGGT

mRNA sequence

GTTATCCCCTCTCTTCTCTCCTCATTTCCTCCCATGAGACCGTTGCAAGATCTGAACTGAATTTTGAAAAGAAGAAAAACTTGATCACCCAACTGATATATGGATCATACTTTTCCTGCGGAATTCTGGCATAGCGATTTCTTTTGGCTCGACGCTCCCATTTCCGTCCCCGCCGCCGGTCCTGCGAGACAGATAAGTGCTTTCGTACCATATGATCCGTCTCAAGTGGCTACCGGATTGGGACAAGAAAAAAATCCGACAACTACCACCGTCACCACGAGCTATAATTCTAGGAATGTCAACAAGAGGATGGTTGAGTATTGGAGGAAGCATTGGCATGAAAAGAAAGAAACAAGTCCCCTAGGGGAATTAGAGAGAGAAAAATGTCACCGTCACATGTTGAACGAGAGGATGAGAAGAGAGAAACAGAAACAGAGTTATTTGGCACTCCACTCCATGCTCCCCAAAAATACTAAGCGTCCAAATTTAGTAGTGTTTGTCATTAACGATAAGAATTCGATCGTTCAAAGTGCGGCGAGAGCAATACAAGAAATGAAAGCCTTAGAGGAGATTTTAAAGAGGAGAAACTTAGAGTTGGAGATGGCAATAGCAAGGAAGAAGAAAGAAAAGGAAAAAGAGACAACACCAATAATAAGTGTAGCATTGTCCAATCCTTCTTGTGGGATCAACTCAATGCTGGCTGTTCTCAATGTTCTCAAAACTGTTGGAGTAAATTCCAAAGCCATTCATGCCACTTTCGTCAACTCTCAGTTTTCAGCCCAATTAGCCATTGATACCCATATGGGAGCTGCCGAAGTAGAAAGAGCATTGCAGGTGACGCTAAACGAAGCTGAGAGGAAATTTCAAAGGCAATGCATGGAAGGGTCCAAACAAATAAAAGAGAGCCATTTTAATTTTAATAATAATAAAGGGGCCCACGAGGTGGGTCCAGAATTTCAATTTTAAATAGCCACGTGGGCACGTGGGAAATAAGGT

Coding sequence (CDS)

ATGGATCATACTTTTCCTGCGGAATTCTGGCATAGCGATTTCTTTTGGCTCGACGCTCCCATTTCCGTCCCCGCCGCCGGTCCTGCGAGACAGATAAGTGCTTTCGTACCATATGATCCGTCTCAAGTGGCTACCGGATTGGGACAAGAAAAAAATCCGACAACTACCACCGTCACCACGAGCTATAATTCTAGGAATGTCAACAAGAGGATGGTTGAGTATTGGAGGAAGCATTGGCATGAAAAGAAAGAAACAAGTCCCCTAGGGGAATTAGAGAGAGAAAAATGTCACCGTCACATGTTGAACGAGAGGATGAGAAGAGAGAAACAGAAACAGAGTTATTTGGCACTCCACTCCATGCTCCCCAAAAATACTAAGCGTCCAAATTTAGTAGTGTTTGTCATTAACGATAAGAATTCGATCGTTCAAAGTGCGGCGAGAGCAATACAAGAAATGAAAGCCTTAGAGGAGATTTTAAAGAGGAGAAACTTAGAGTTGGAGATGGCAATAGCAAGGAAGAAGAAAGAAAAGGAAAAAGAGACAACACCAATAATAAGTGTAGCATTGTCCAATCCTTCTTGTGGGATCAACTCAATGCTGGCTGTTCTCAATGTTCTCAAAACTGTTGGAGTAAATTCCAAAGCCATTCATGCCACTTTCGTCAACTCTCAGTTTTCAGCCCAATTAGCCATTGATACCCATATGGGAGCTGCCGAAGTAGAAAGAGCATTGCAGGTGACGCTAAACGAAGCTGAGAGGAAATTTCAAAGGCAATGCATGGAAGGGTCCAAACAAATAAAAGAGAGCCATTTTAATTTTAATAATAATAAAGGGGCCCACGAGGTGGGTCCAGAATTTCAATTTTAA

Protein sequence

MDHTFPAEFWHSDFFWLDAPISVPAAGPARQISAFVPYDPSQVATGLGQEKNPTTTTVTTSYNSRNVNKRMVEYWRKHWHEKKETSPLGELEREKCHRHMLNERMRREKQKQSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHFNFNNNKGAHEVGPEFQF

Homology

[Close]

BLAST of CaUC06G113420 vs. NCBI nr
Match: XP_038875776.1 (transcription factor bHLH92 [Benincasa hispida])

HSP 1 Score: 441.4 bits (1134), Expect = 5.9e-120
Identity = 237/298 (79.53%), Postives = 256/298 (85.91%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVP----AAGPARQISAFVPYDPSQVATGLGQEKNPTT- 60
           MD +F  E+WH+DFFWLDAPISVP     + PARQISAFVPY  ++ ATGLGQE NPTT 
Sbjct: 1   MDDSFSVEYWHNDFFWLDAPISVPVPASTSAPARQISAFVPY-LTRPATGLGQENNPTTS 60

Query: 61  ------TTVTTSYNSRNVNKRMVEYWRKHWHEKKETSPLGELEREKCHRHMLNERMRREK 120
                 TT ++SYNSRNVNKRMVEYWRKHWHEKKE + LG+ EREKCHRHMLNERMRREK
Sbjct: 61  AAAATVTTTSSSYNSRNVNKRMVEYWRKHWHEKKEPTSLGDFEREKCHRHMLNERMRREK 120

Query: 121 QKQSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMA 180
           QKQSYLALHSMLPKNTK         NDKNSI+QSA R IQEMKALE+ LKRRNLELEMA
Sbjct: 121 QKQSYLALHSMLPKNTK---------NDKNSIIQSATRTIQEMKALEKTLKRRNLELEMA 180

Query: 181 IARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQL 240
           IARKKKEKEK TTPII+VALSNPSCGINSMLAVLN LKTVGVNSKAIHATF NSQFSAQL
Sbjct: 181 IARKKKEKEKGTTPIINVALSNPSCGINSMLAVLNFLKTVGVNSKAIHATFFNSQFSAQL 240

Query: 241 AIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHFNFNNNKGAHEVGPEFQ 288
           AIDTHMGAAEVERALQVTL+EAERKFQRQC EGSK+IKE+HFNFNN++G H VGPEF+
Sbjct: 241 AIDTHMGAAEVERALQVTLDEAERKFQRQCKEGSKEIKETHFNFNNSRGTHHVGPEFE 288

[Close]

BLAST of CaUC06G113420 vs. NCBI nr
Match: XP_008465193.1 (PREDICTED: transcription factor bHLH92 [Cucumis melo] >KAA0057518.1 transcription factor bHLH92 [Cucumis melo var. makuwa] >TYK08199.1 transcription factor bHLH92 [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-97
Identity = 210/284 (73.94%), Postives = 227/284 (79.93%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAG-----PARQISAFVPYDPSQVATGLGQEKN--- 60
           MD TFP EFWH+D FWLDAPISVP +      PA QISAF+PY  +     LGQ+ N   
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  PTTTTVTTSYNSRNVNKRMVEYWRKHWHEKKETS-PLGELEREKCHRHMLNERMRREKQK 120
            TTTT  TSY+SRNVNKRM+EYW KHWHEKKE     G+LEREKCHRHMLNERMRREKQK
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 QSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRN--LELEMA 180
           QSYLALHSMLPKNTK         NDKNSIVQSAAR IQEMK LE+ LKRRN  LE+E+A
Sbjct: 121 QSYLALHSMLPKNTK---------NDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIA 180

Query: 181 IARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQL 240
           IA KKKEKEK    II+VAL N SCGINSML VLNVLKTVGVNSKAIHATF NSQFSAQL
Sbjct: 181 IAMKKKEKEKR---IINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQL 240

Query: 241 AIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHFNF 274
           AIDTHMGAAEVERALQVTLNEAERKF+RQ  EGSK+IK+++F F
Sbjct: 241 AIDTHMGAAEVERALQVTLNEAERKFRRQYSEGSKEIKDNYFKF 272

[Close]

BLAST of CaUC06G113420 vs. NCBI nr
Match: XP_011649165.2 (transcription factor bHLH92 [Cucumis sativus] >KGN61628.1 hypothetical protein Csa_006720 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 5.0e-95
Identity = 207/289 (71.63%), Postives = 225/289 (77.85%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAG-----PARQISAFVPYDPSQVATG-LGQEKNPT 60
           MD TFP EFWH+D FWLDAPISVP +      PA+QISAF+PYD S   TG LGQ+ N  
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPVSAPTSPPPAKQISAFLPYDLSPPPTGLLGQDNNIA 60

Query: 61  TTT-----------VTTSYNSRNVNKRMVEYWRKHWHEKKETS-PLGELEREKCHRHMLN 120
           TTT            +TSY+SRNVNKRM+EYWRKHWHEKKE     G+LEREKCHRHMLN
Sbjct: 61  TTTAATVIASASASASTSYDSRNVNKRMIEYWRKHWHEKKELPVSAGDLEREKCHRHMLN 120

Query: 121 ERMRREKQKQSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRR 180
           ERMRREKQKQ YLALHSMLP+NTK         NDKNSIVQSAAR IQEMK LE+ LKRR
Sbjct: 121 ERMRREKQKQCYLALHSMLPRNTK---------NDKNSIVQSAARTIQEMKGLEKTLKRR 180

Query: 181 NLELEMAIARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVN 240
           N ELEM IA   K+KEK+   II+VAL+N SCGINSML VLNVLKTVGVNS AIHATF N
Sbjct: 181 NSELEMEIAIAMKKKEKK-EGIINVALANTSCGINSMLTVLNVLKTVGVNSNAIHATFFN 240

Query: 241 SQFSAQLAIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHF 272
           SQFSAQLAIDTHM  AEVERALQ+TLNEAERKFQRQ  EGSK+IKES+F
Sbjct: 241 SQFSAQLAIDTHMRVAEVERALQLTLNEAERKFQRQHSEGSKEIKESYF 279

[Close]

BLAST of CaUC06G113420 vs. NCBI nr
Match: XP_023000539.1 (transcription factor bHLH92-like [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 1.5e-78
Identity = 168/268 (62.69%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAGPARQISAFVPYDPSQVATGLGQEKNPTTTTVTT 60
           MD  FP EFWH+D +WLD PISV    P  QISAFVPY P Q A G GQ+ NP   T   
Sbjct: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPG-QISAFVPYLP-QPAIGSGQKNNPIAATY-- 60

Query: 61  SYNSRNVNKRMVEYWRKHWHEKKETSPLGELEREKCHRHMLNERMRREKQKQSYLALHSM 120
              S N++KR+++YWRK W EKK+ + +G+LEREK H+HMLNERMRREK ++SY  LHSM
Sbjct: 61  ---SENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEKE 180
           LP  TK         NDKNSIVQ AAR I+E+KA E +LK+RN+ELEMA++ KK+++EK 
Sbjct: 121 LPSKTK---------NDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG 180

Query: 181 TTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAIDTHMGAAEV 240
           TTP I VA++NPS GINSML VLN+LKTVGVN+KAIHATF++SQFS  +AI++HM AAEV
Sbjct: 181 TTP-IRVAVANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEV 240

Query: 241 ERALQVTLNEAERKFQRQCMEGSKQIKE 269
           ERALQ+TL+EAERKFQRQC EGS  +K+
Sbjct: 241 ERALQMTLSEAERKFQRQCEEGSHDVKD 251

[Close]

BLAST of CaUC06G113420 vs. NCBI nr
Match: KAG7026190.1 (Transcription factor bHLH92, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.2 bits (757), Expect = 3.1e-76
Identity = 163/258 (63.18%), Postives = 199/258 (77.13%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAGPARQISAFVPYDPSQVATGLGQEKNPTTTTVTT 60
           MD  FP EFWH+D +WLD PI VP   P  QISAFVPY P Q   G  Q+ NP T T  T
Sbjct: 1   MDDGFPVEFWHTDLYWLDPPIPVPDPAPG-QISAFVPYLP-QPTIGSRQKNNPITATTIT 60

Query: 61  SYNSRNVNKRMVEYWRKHWHEKKETSPLGELEREKCHRHMLNERMRREKQKQSYLALHSM 120
           +  S NV+KR++EYWRK W EKK+ + +G+LERE+ HRHMLNERMRREK ++SY  LHSM
Sbjct: 61  ATYSENVHKRVIEYWRKQWQEKKKPAEMGDLERERSHRHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEKE 180
           LP  TK         NDKNSIVQ AAR I+E+KA E +LK+RN+ELEMA++ KK+++EK 
Sbjct: 121 LPSKTK---------NDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG 180

Query: 181 TTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAIDTHMGAAEV 240
           TTP I VA++NPS GINSML VLN+LKTVGVN+KAIHATF++S+FS  +AID+HM AAEV
Sbjct: 181 TTP-IRVAVANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSRFSTHIAIDSHMRAAEV 240

Query: 241 ERALQVTLNEAERKFQRQ 259
           ER LQ+T++EAERKFQRQ
Sbjct: 241 ERELQMTVSEAERKFQRQ 246

[Close]

BLAST of CaUC06G113420 vs. ExPASy Swiss-Prot
Match: Q9FIX5 (Transcription factor bHLH92 OS=Arabidopsis thaliana OX=3702 GN=BHLH92 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.1e-26
Identity = 84/190 (44.21%), Postives = 113/190 (59.47%), Query Frame = 0


Query: 66  NVNKRMVEYWRKHWHEKKET-SPLGELEREKCHRHMLNERMRREKQKQSYLALHSMLPKN 125
           NV KRMV   RK+W EKK T +P    E+E+  RHML ER RREKQKQSYLALHS+LP  
Sbjct: 60  NVKKRMVNLLRKNWEEKKNTVAP----EKERSRRHMLKERTRREKQKQSYLALHSLLPFA 119

Query: 126 TKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEKETTPI 185
           TK         NDKNSIV+ A   I +++ L++ L RR   +E   A+   ++  ET   
Sbjct: 120 TK---------NDKNSIVEKAVDEIAKLQRLKKELVRRIKVIEEKSAKDGHDEMSETK-- 179

Query: 186 ISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAIDTHMGAAEVERAL 245
           + V L  P  G++SML  L+ LK++G   K +HA F   +FSA + I+T +   EVE+ +
Sbjct: 180 VRVNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIETQIRGEEVEKRV 234

Query: 246 QVTLNEAERK 255
           +  L E E K
Sbjct: 240 ERRLQETEWK 234

[Close]

BLAST of CaUC06G113420 vs. ExPASy Swiss-Prot
Match: Q75KV9 (Transcription factor BHLH148 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 58/164 (35.37%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 90  ELEREKCHRHMLNERMRREKQKQSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAI 149
           ++E  +  RHM+ ER RREK  QSY  L++M+   +K          DKNSIVQSAA  I
Sbjct: 123 DVESSRGFRHMMRERQRREKLSQSYADLYAMVSSRSK---------GDKNSIVQSAAIYI 182

Query: 150 QEMKALEEILKRRNLELEMAIARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTV 209
            E+K   + L+RRN EL+   A+     E++    +   +  PS  I+SM+A L  LK +
Sbjct: 183 HELKVARDQLQRRNEELK---AQIMGHDEQQPCVTVQFEVDEPSSSIDSMIAALRRLKGM 242

Query: 210 GVNSKAIHATFVNSQFSAQLAIDTHMGAAEVERALQVTLNEAER 254
            V ++ I ++   ++   ++ ++T + A EVE+A++  L E ER
Sbjct: 243 SVKARGIRSSMSGNRLWTEMNVETTIAACEVEKAVEEALKEVER 274

[Close]

BLAST of CaUC06G113420 vs. ExPASy TrEMBL
Match: A0A5A7UQX2 (Transcription factor bHLH92 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00150 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 8.9e-98
Identity = 210/284 (73.94%), Postives = 227/284 (79.93%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAG-----PARQISAFVPYDPSQVATGLGQEKN--- 60
           MD TFP EFWH+D FWLDAPISVP +      PA QISAF+PY  +     LGQ+ N   
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  PTTTTVTTSYNSRNVNKRMVEYWRKHWHEKKETS-PLGELEREKCHRHMLNERMRREKQK 120
            TTTT  TSY+SRNVNKRM+EYW KHWHEKKE     G+LEREKCHRHMLNERMRREKQK
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 QSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRN--LELEMA 180
           QSYLALHSMLPKNTK         NDKNSIVQSAAR IQEMK LE+ LKRRN  LE+E+A
Sbjct: 121 QSYLALHSMLPKNTK---------NDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIA 180

Query: 181 IARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQL 240
           IA KKKEKEK    II+VAL N SCGINSML VLNVLKTVGVNSKAIHATF NSQFSAQL
Sbjct: 181 IAMKKKEKEKR---IINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQL 240

Query: 241 AIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHFNF 274
           AIDTHMGAAEVERALQVTLNEAERKF+RQ  EGSK+IK+++F F
Sbjct: 241 AIDTHMGAAEVERALQVTLNEAERKFRRQYSEGSKEIKDNYFKF 272

[Close]

BLAST of CaUC06G113420 vs. ExPASy TrEMBL
Match: A0A1S3CPU0 (transcription factor bHLH92 OS=Cucumis melo OX=3656 GN=LOC103502857 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 8.9e-98
Identity = 210/284 (73.94%), Postives = 227/284 (79.93%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAG-----PARQISAFVPYDPSQVATGLGQEKN--- 60
           MD TFP EFWH+D FWLDAPISVP +      PA QISAF+PY  +     LGQ+ N   
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPLSAPSSPPPATQISAFLPYLSAPPTGLLGQDNNNIA 60

Query: 61  PTTTTVTTSYNSRNVNKRMVEYWRKHWHEKKETS-PLGELEREKCHRHMLNERMRREKQK 120
            TTTT  TSY+SRNVNKRM+EYW KHWHEKKE     G+LEREKCHRHMLNERMRREKQK
Sbjct: 61  TTTTTAATSYDSRNVNKRMIEYWTKHWHEKKELPVSAGDLEREKCHRHMLNERMRREKQK 120

Query: 121 QSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRN--LELEMA 180
           QSYLALHSMLPKNTK         NDKNSIVQSAAR IQEMK LE+ LKRRN  LE+E+A
Sbjct: 121 QSYLALHSMLPKNTK---------NDKNSIVQSAARTIQEMKGLEKTLKRRNSELEMEIA 180

Query: 181 IARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQL 240
           IA KKKEKEK    II+VAL N SCGINSML VLNVLKTVGVNSKAIHATF NSQFSAQL
Sbjct: 181 IAMKKKEKEKR---IINVALRNTSCGINSMLTVLNVLKTVGVNSKAIHATFFNSQFSAQL 240

Query: 241 AIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHFNF 274
           AIDTHMGAAEVERALQVTLNEAERKF+RQ  EGSK+IK+++F F
Sbjct: 241 AIDTHMGAAEVERALQVTLNEAERKFRRQYSEGSKEIKDNYFKF 272

[Close]

BLAST of CaUC06G113420 vs. ExPASy TrEMBL
Match: A0A0A0LIK3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G193320 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.4e-95
Identity = 207/289 (71.63%), Postives = 225/289 (77.85%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAG-----PARQISAFVPYDPSQVATG-LGQEKNPT 60
           MD TFP EFWH+D FWLDAPISVP +      PA+QISAF+PYD S   TG LGQ+ N  
Sbjct: 1   MDDTFPVEFWHNDHFWLDAPISVPVSAPTSPPPAKQISAFLPYDLSPPPTGLLGQDNNIA 60

Query: 61  TTT-----------VTTSYNSRNVNKRMVEYWRKHWHEKKETS-PLGELEREKCHRHMLN 120
           TTT            +TSY+SRNVNKRM+EYWRKHWHEKKE     G+LEREKCHRHMLN
Sbjct: 61  TTTAATVIASASASASTSYDSRNVNKRMIEYWRKHWHEKKELPVSAGDLEREKCHRHMLN 120

Query: 121 ERMRREKQKQSYLALHSMLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRR 180
           ERMRREKQKQ YLALHSMLP+NTK         NDKNSIVQSAAR IQEMK LE+ LKRR
Sbjct: 121 ERMRREKQKQCYLALHSMLPRNTK---------NDKNSIVQSAARTIQEMKGLEKTLKRR 180

Query: 181 NLELEMAIARKKKEKEKETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVN 240
           N ELEM IA   K+KEK+   II+VAL+N SCGINSML VLNVLKTVGVNS AIHATF N
Sbjct: 181 NSELEMEIAIAMKKKEKK-EGIINVALANTSCGINSMLTVLNVLKTVGVNSNAIHATFFN 240

Query: 241 SQFSAQLAIDTHMGAAEVERALQVTLNEAERKFQRQCMEGSKQIKESHF 272
           SQFSAQLAIDTHM  AEVERALQ+TLNEAERKFQRQ  EGSK+IKES+F
Sbjct: 241 SQFSAQLAIDTHMRVAEVERALQLTLNEAERKFQRQHSEGSKEIKESYF 279

[Close]

BLAST of CaUC06G113420 vs. ExPASy TrEMBL
Match: A0A6J1KK97 (transcription factor bHLH92-like OS=Cucurbita maxima OX=3661 GN=LOC111494781 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 7.1e-79
Identity = 168/268 (62.69%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAGPARQISAFVPYDPSQVATGLGQEKNPTTTTVTT 60
           MD  FP EFWH+D +WLD PISV    P  QISAFVPY P Q A G GQ+ NP   T   
Sbjct: 1   MDDGFPVEFWHTDLYWLDTPISVSDPAPG-QISAFVPYLP-QPAIGSGQKNNPIAATY-- 60

Query: 61  SYNSRNVNKRMVEYWRKHWHEKKETSPLGELEREKCHRHMLNERMRREKQKQSYLALHSM 120
              S N++KR+++YWRK W EKK+ + +G+LEREK H+HMLNERMRREK ++SY  LHSM
Sbjct: 61  ---SENIHKRVIKYWRKKWQEKKKPAEMGDLEREKSHQHMLNERMRREKHRRSYSELHSM 120

Query: 121 LPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEKE 180
           LP  TK         NDKNSIVQ AAR I+E+KA E +LK+RN+ELEMA++ KK+++EK 
Sbjct: 121 LPSKTK---------NDKNSIVQMAARTIEELKASEGMLKKRNIELEMALSAKKRKQEKG 180

Query: 181 TTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAIDTHMGAAEV 240
           TTP I VA++NPS GINSML VLN+LKTVGVN+KAIHATF++SQFS  +AI++HM AAEV
Sbjct: 181 TTP-IRVAVANPSSGINSMLGVLNLLKTVGVNAKAIHATFLDSQFSTHIAIESHMRAAEV 240

Query: 241 ERALQVTLNEAERKFQRQCMEGSKQIKE 269
           ERALQ+TL+EAERKFQRQC EGS  +K+
Sbjct: 241 ERALQMTLSEAERKFQRQCEEGSHDVKD 251

[Close]

BLAST of CaUC06G113420 vs. ExPASy TrEMBL
Match: A0A6J1CBV8 (transcription factor bHLH92 OS=Momordica charantia OX=3673 GN=LOC111009795 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 8.1e-75
Identity = 168/278 (60.43%), Postives = 201/278 (72.30%), Query Frame = 0


Query: 1   MDHTFPAEFWHSDFFWLDAPISVPAAGPARQISAFVPYDPSQVATGLGQEKNPTTTTVTT 60
           MD  FP EFW SD FWLDA ++     P  + SAF PY  ++     GQ+ N  T     
Sbjct: 1   MDDGFPVEFWQSDAFWLDADLA-----PVARTSAFDPYS-TRTNARFGQDNNLATAAAIV 60

Query: 61  SYNSRNVNKRMVEYWRKHWHEKKETSPLGE-LEREKCHRHMLNERMRREKQKQSYLALHS 120
             NSRN+NKRM+E+WRK WHEK + +  GE LEREK +RHMLNER+RREKQ++SYL LHS
Sbjct: 61  GDNSRNINKRMIEFWRKKWHEKNKAAAAGEDLEREKNYRHMLNERLRREKQRKSYLELHS 120

Query: 121 MLPKNTKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEK 180
           MLPK TK         NDKNSIVQ AA  IQE+K LE IL+RR+LELE+A+A +K+EKE 
Sbjct: 121 MLPKKTK---------NDKNSIVQMAASTIQELKTLEAILERRDLELEIALAARKREKEN 180

Query: 181 ETTPIISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAID--THMGA 240
            TT  I VAL+NPS GINSMLA+LNVLKTVGVN K I+A F +++FSAQL ID    MGA
Sbjct: 181 GTTTTIRVALANPSSGINSMLAILNVLKTVGVNVKVINANFFDAEFSAQLDIDHTQMMGA 240

Query: 241 AEVERALQVTLNEAERKFQRQCMEGSKQIKESHFNFNN 276
           AEVER +Q+TL EAERKFQ QC E +K IK+S+FNFNN
Sbjct: 241 AEVERVVQLTLTEAERKFQGQCQERTKFIKQSYFNFNN 263

[Close]

BLAST of CaUC06G113420 vs. TAIR 10
Match: AT5G43650.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-27
Identity = 84/190 (44.21%), Postives = 113/190 (59.47%), Query Frame = 0


Query: 66  NVNKRMVEYWRKHWHEKKET-SPLGELEREKCHRHMLNERMRREKQKQSYLALHSMLPKN 125
           NV KRMV   RK+W EKK T +P    E+E+  RHML ER RREKQKQSYLALHS+LP  
Sbjct: 60  NVKKRMVNLLRKNWEEKKNTVAP----EKERSRRHMLKERTRREKQKQSYLALHSLLPFA 119

Query: 126 TKRPNLVVFVINDKNSIVQSAARAIQEMKALEEILKRRNLELEMAIARKKKEKEKETTPI 185
           TK         NDKNSIV+ A   I +++ L++ L RR   +E   A+   ++  ET   
Sbjct: 120 TK---------NDKNSIVEKAVDEIAKLQRLKKELVRRIKVIEEKSAKDGHDEMSETK-- 179

Query: 186 ISVALSNPSCGINSMLAVLNVLKTVGVNSKAIHATFVNSQFSAQLAIDTHMGAAEVERAL 245
           + V L  P  G++SML  L+ LK++G   K +HA F   +FSA + I+T +   EVE+ +
Sbjct: 180 VRVNLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIETQIRGEEVEKRV 234

Query: 246 QVTLNEAERK 255
           +  L E E K
Sbjct: 240 ERRLQETEWK 234

The following BLAST results are available for this feature:

BLAST of CaUC06G113420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875776.1	5.9e-120	79.53	transcription factor bHLH92 [Benincasa hispida]	[more]
XP_008465193.1	1.8e-97	73.94	PREDICTED: transcription factor bHLH92 [Cucumis melo] >KAA0057518.1 transcriptio...	[more]
XP_011649165.2	5.0e-95	71.63	transcription factor bHLH92 [Cucumis sativus] >KGN61628.1 hypothetical protein C...	[more]
XP_023000539.1	1.5e-78	62.69	transcription factor bHLH92-like [Cucurbita maxima]	[more]
KAG7026190.1	3.1e-76	63.18	Transcription factor bHLH92, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of CaUC06G113420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIX5	5.1e-26	44.21	Transcription factor bHLH92 OS=Arabidopsis thaliana OX=3702 GN=BHLH92 PE=1 SV=1	[more]
Q75KV9	1.2e-14	35.37	Transcription factor BHLH148 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH148...	[more]

BLAST of CaUC06G113420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQX2	8.9e-98	73.94	Transcription factor bHLH92 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CPU0	8.9e-98	73.94	transcription factor bHLH92 OS=Cucumis melo OX=3656 GN=LOC103502857 PE=4 SV=1	[more]
A0A0A0LIK3	2.4e-95	71.63	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G193320 PE=4 S...	[more]
A0A6J1KK97	7.1e-79	62.69	transcription factor bHLH92-like OS=Cucurbita maxima OX=3661 GN=LOC111494781 PE=...	[more]
A0A6J1CBV8	8.1e-75	60.43	transcription factor bHLH92 OS=Momordica charantia OX=3673 GN=LOC111009795 PE=4 ...	[more]

BLAST of CaUC06G113420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43650.1	3.6e-27	44.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..181
None	No IPR available	PANTHER	PTHR46665:SF6	TRANSCRIPTION FACTOR BHLH92	coord: 1..260
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 99..160 e-value: 2.95494E-7 score: 44.4796
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 89..170 e-value: 1.8E-5 score: 26.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 93..169
IPR044658	Transcription factor bHLH92/bHLH041-like	PANTHER	PTHR46665	TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED	coord: 1..260
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 94..152 score: 9.476738

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G113420.1	CaUC06G113420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding