CaUC04G078330 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G078330
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transcription factor PRE5-like
Location	Ciama_Chr04: 27677247 .. 27677614 (-)
RNA-Seq Expression	CaUC04G078330
Synteny	CaUC04G078330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACACCATTCCTTTCCAATTCTCCTTCTTTCATTCATGGCTTCCTCCAAATTAGGCGACGACCAGCTTCAAAATCTCATCTTCAAATTACAAACTTTGCTCCCTCACCTCAACCATAAGTCCGACGATTCTACGGTACATATATATACTCTCCTCTTCTAACTTACGATATAAACTTTTGAGTTCATTAGTGGTTTGACATGTATGCAGGTATCGACAGCGGAGATATTGAAGGAAACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATTTAAGTGAGAGGCTATGGAAGCAGCTGGATTCAATGGGTGTTGACTTTGAGATGGTTAAGGATCTTCTTCTTACTTAAAAAGAAATATT

mRNA sequence

AAACACCATTCCTTTCCAATTCTCCTTCTTTCATTCATGGCTTCCTCCAAATTAGGCGACGACCAGCTTCAAAATCTCATCTTCAAATTACAAACTTTGCTCCCTCACCTCAACCATAAGTCCGACGATTCTACGGTATCGACAGCGGAGATATTGAAGGAAACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATTTAAGTGAGAGGCTATGGAAGCAGCTGGATTCAATGGGTGTTGACTTTGAGATGGTTAAGGATCTTCTTCTTACTTAAAAAGAAATATT

Coding sequence (CDS)

ATGGCTTCCTCCAAATTAGGCGACGACCAGCTTCAAAATCTCATCTTCAAATTACAAACTTTGCTCCCTCACCTCAACCATAAGTCCGACGATTCTACGGTATCGACAGCGGAGATATTGAAGGAAACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATTTAAGTGAGAGGCTATGGAAGCAGCTGGATTCAATGGGTGTTGACTTTGAGATGGTTAAGGATCTTCTTCTTACTTAA

Protein sequence

MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLWKQLDSMGVDFEMVKDLLLT

Homology

[Close]

BLAST of CaUC04G078330 vs. NCBI nr
Match: XP_011649678.1 (transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa_014368 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDST-VSTAEILKETCDYIKKLQREVDDLSE 60
          MASSKLGDD+L+NL+ KLQTLLP LNHK  +S+ VS  EILKETCDYIKKLQREVDDLSE
Sbjct: 1  MASSKLGDDELKNLVSKLQTLLPQLNHKPHNSSEVSAGEILKETCDYIKKLQREVDDLSE 60

Query: 61 RLWKQLDSMGVDFEMVKDLL 80
          RLWKQLDSMG+DFEMVKDLL
Sbjct: 61 RLWKQLDSMGIDFEMVKDLL 80

[Close]

BLAST of CaUC04G078330 vs. NCBI nr
Match: XP_008440200.1 (PREDICTED: transcription factor PRE5-like [Cucumis melo] >KAA0036068.1 transcription factor PRE5-like [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 66/81 (81.48%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDST-VSTAEILKETCDYIKKLQREVDDLSE 60
          MASSKLGD++L+NL+ KL+TLLP LNHK D+S+  ST EILKETCDYIKKLQ+EVDDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWKQLDSMGVDFEMVKDLLL 81
          RLWKQLDSMGVDFEMVKDLL+
Sbjct: 61 RLWKQLDSMGVDFEMVKDLLI 81

[Close]

BLAST of CaUC04G078330 vs. NCBI nr
Match: XP_038895474.1 (transcription factor PRE5-like [Benincasa hispida])

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1   MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDS---TVSTAEILKETCDYIKKLQREVDDL 60
           MASSKL DD LQNL+FKLQTLLPHLN K D+    +VS  +ILKETCDYIKKLQREVDDL
Sbjct: 42  MASSKLADDDLQNLVFKLQTLLPHLNRKPDNDSAVSVSATDILKETCDYIKKLQREVDDL 101

Query: 61  SERLWKQLDSMGVDFEMVKDLLL 81
           SERLWKQLDSMGVD EMVKDL+L
Sbjct: 102 SERLWKQLDSMGVDLEMVKDLIL 124

[Close]

BLAST of CaUC04G078330 vs. NCBI nr
Match: KAG7020038.1 (Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.0 bits (328), Expect = 4.8e-27
Identity = 67/79 (84.81%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSER 60
          MASS L DDQL+NL+ +LQTLLP LNH    STVSTAEILKETCDYIKKLQREVDDLSER
Sbjct: 1  MASSTLPDDQLRNLLSRLQTLLPQLNHTLHTSTVSTAEILKETCDYIKKLQREVDDLSER 60

Query: 61 LWKQLDSMGVDFEMVKDLL 80
          LWKQLDSMGVDFEMVK LL
Sbjct: 61 LWKQLDSMGVDFEMVKHLL 79

[Close]

BLAST of CaUC04G078330 vs. NCBI nr
Match: KAG6584448.1 (Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130.6 bits (327), Expect = 6.2e-27
Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSER 60
          MASS L DDQL+NL+ +LQTLLP LNH    STVSTAEILKETCDYIKKLQREVDDLSER
Sbjct: 1  MASSTLPDDQLRNLLSRLQTLLPQLNHTLHTSTVSTAEILKETCDYIKKLQREVDDLSER 60

Query: 61 LWKQLDSMGVDFEMVKDLL 80
          LWKQLDSMG+DFEMVK LL
Sbjct: 61 LWKQLDSMGIDFEMVKHLL 79

[Close]

BLAST of CaUC04G078330 vs. ExPASy Swiss-Prot
Match: Q9LJX1 (Transcription factor PRE5 OS=Arabidopsis thaliana OX=3702 GN=PRE5 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-11
Identity = 31/69 (44.93%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLW 62
          +S++ DDQ+ +L+ KL+  LP ++ +     VS +++L+ETC+YI+KL REVD+LS+RL 
Sbjct: 12 ASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLS 71

Query: 63 KQLDSMGVD 72
          + LDS+  D
Sbjct: 72 QLLDSVDED 80

[Close]

BLAST of CaUC04G078330 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.5e-11
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLW 62
          SS++ DDQ+ +L+ KLQ L+P L  +  D  VS +++L+ETC+YI+ L REVDDLS+RL 
Sbjct: 14 SSRISDDQISDLVSKLQHLIPELRRRRSDK-VSASKVLQETCNYIRNLHREVDDLSDRLS 73

Query: 63 KQL---DSMGVDFEMVKDLL 80
          + L   D    +  +++ LL
Sbjct: 74 ELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CaUC04G078330 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-10
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERL 62
          +S++ +DQ+ +LI KLQ LLP L        VS A +L++TC+YI+ L REVDDLSERL
Sbjct: 14 TSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERL 72

[Close]

BLAST of CaUC04G078330 vs. ExPASy Swiss-Prot
Match: Q9LXG5 (Transcription factor PRE2 OS=Arabidopsis thaliana OX=3702 GN=PRE2 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-10
Identity = 29/67 (43.28%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 2  ASSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERL 61
          +SS++ DDQ+ +LI KL+  +P +      +TVS +++L+ETC+YI+ L +E DDLS+RL
Sbjct: 12 SSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRL 71

Query: 62 WKQLDSM 69
           + L+S+
Sbjct: 72 TQLLESI 78

[Close]

BLAST of CaUC04G078330 vs. ExPASy Swiss-Prot
Match: A2XD15 (Transcription factor ILI3 OS=Oryza sativa subsp. indica OX=39946 GN=ILI3 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-09
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 5  KLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSER---L 64
          ++ D+++  LI KLQ LLP  +     S  S +++LKETC YIK L REVDDLS+R   L
Sbjct: 13 RITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHREVDDLSDRLSEL 72

Query: 65 WKQLDSMGVDFEMVKDLL 80
             +D+     E+++ LL
Sbjct: 73 MSTMDNNSPQAEIIRSLL 90

[Close]

BLAST of CaUC04G078330 vs. ExPASy TrEMBL
Match: A0A0A0LQ05 (DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.1e-28
Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDST-VSTAEILKETCDYIKKLQREVDDLSE 60
          MASSKLGDD+L+NL+ KLQTLLP LNHK  +S+ VS  EILKETCDYIKKLQREVDDLSE
Sbjct: 1  MASSKLGDDELKNLVSKLQTLLPQLNHKPHNSSEVSAGEILKETCDYIKKLQREVDDLSE 60

Query: 61 RLWKQLDSMGVDFEMVKDLL 80
          RLWKQLDSMG+DFEMVKDLL
Sbjct: 61 RLWKQLDSMGIDFEMVKDLL 80

[Close]

BLAST of CaUC04G078330 vs. ExPASy TrEMBL
Match: A0A5A7SZP9 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00610 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 66/81 (81.48%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDST-VSTAEILKETCDYIKKLQREVDDLSE 60
          MASSKLGD++L+NL+ KL+TLLP LNHK D+S+  ST EILKETCDYIKKLQ+EVDDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWKQLDSMGVDFEMVKDLLL 81
          RLWKQLDSMGVDFEMVKDLL+
Sbjct: 61 RLWKQLDSMGVDFEMVKDLLI 81

[Close]

BLAST of CaUC04G078330 vs. ExPASy TrEMBL
Match: A0A1S3B0J1 (transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 66/81 (81.48%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDST-VSTAEILKETCDYIKKLQREVDDLSE 60
          MASSKLGD++L+NL+ KL+TLLP LNHK D+S+  ST EILKETCDYIKKLQ+EVDDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWKQLDSMGVDFEMVKDLLL 81
          RLWKQLDSMGVDFEMVKDLL+
Sbjct: 61 RLWKQLDSMGVDFEMVKDLLI 81

[Close]

BLAST of CaUC04G078330 vs. ExPASy TrEMBL
Match: A0A5D3BKI2 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00710 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.3e-25
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MASSKLGDDQLQNLIFKLQTLLPHLNHKSDDST-VSTAEILKETCDYIKKLQREVDDLSE 60
          MASSKLGD++L+NL+ KL+TLLP LNHK D+S+  ST EILKETCDYIKKLQ+EVDDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWKQLDSMGVDFEM 75
          RLWKQLDSMGVDFEM
Sbjct: 61 RLWKQLDSMGVDFEM 75

[Close]

BLAST of CaUC04G078330 vs. ExPASy TrEMBL
Match: A0A067K4V8 (BHLH domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_11607 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLW 62
          +SK+  +++ +LI KLQ LLPH+N +  DS VS ++ILKETC YI KLQREVDDLSE+L 
Sbjct: 11 ASKITKNEIIDLILKLQALLPHINQR-QDSRVSASKILKETCSYIGKLQREVDDLSEKLS 70

Query: 63 KQLDSM---GVDFEMVKDLLL 81
          + LDSM    VD E +  +LL
Sbjct: 71 QMLDSMDISNVDVESLISILL 90

[Close]

BLAST of CaUC04G078330 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.7e-12
Identity = 31/69 (44.93%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLW 62
          +S++ DDQ+ +L+ KL+  LP ++ +     VS +++L+ETC+YI+KL REVD+LS+RL 
Sbjct: 12 ASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLS 71

Query: 63 KQLDSMGVD 72
          + LDS+  D
Sbjct: 72 QLLDSVDED 80

[Close]

BLAST of CaUC04G078330 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 6.0e-12
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLW 62
          SS++ DDQ+ +L+ KLQ L+P L  +  D  VS +++L+ETC+YI+ L REVDDLS+RL 
Sbjct: 14 SSRISDDQISDLVSKLQHLIPELRRRRSDK-VSASKVLQETCNYIRNLHREVDDLSDRLS 73

Query: 63 KQL---DSMGVDFEMVKDLL 80
          + L   D    +  +++ LL
Sbjct: 74 ELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of CaUC04G078330 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 67.0 bits (162), Expect = 7.9e-12
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERL 62
          +S++ +DQ+ +LI KLQ LLP L        VS A +L++TC+YI+ L REVDDLSERL
Sbjct: 14 TSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERL 72

[Close]

BLAST of CaUC04G078330 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 )

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-11
Identity = 29/67 (43.28%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 2  ASSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERL 61
          +SS++ DDQ+ +LI KL+  +P +      +TVS +++L+ETC+YI+ L +E DDLS+RL
Sbjct: 12 SSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRL 71

Query: 62 WKQLDSM 69
           + L+S+
Sbjct: 72 TQLLESI 78

[Close]

BLAST of CaUC04G078330 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 61.6 bits (148), Expect = 3.3e-10
Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 3  SSKLGDDQLQNLIFKLQTLLPHLNHKSDDSTVSTAEILKETCDYIKKLQREVDDLSERLW 62
          +S + D+Q+ +L+ +L  LLP L +      VS + +L+ETC YI+ L +EVDDLSERL 
Sbjct: 13 ASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLS 72

Query: 63 KQLDSM-GVDFEMVKDLLL 81
          + L+S       +++ LL+
Sbjct: 73 QLLESTDSAQAALIRSLLM 91

The following BLAST results are available for this feature:

BLAST of CaUC04G078330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649678.1	1.3e-27	83.75	transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa...	[more]
XP_008440200.1	2.1e-27	81.48	PREDICTED: transcription factor PRE5-like [Cucumis melo] >KAA0036068.1 transcrip...	[more]
XP_038895474.1	2.1e-27	80.72	transcription factor PRE5-like [Benincasa hispida]	[more]
KAG7020038.1	4.8e-27	84.81	Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6584448.1	6.2e-27	83.54	Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CaUC04G078330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJX1	3.8e-11	44.93	Transcription factor PRE5 OS=Arabidopsis thaliana OX=3702 GN=PRE5 PE=1 SV=1	[more]
Q8GW32	8.5e-11	43.75	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
Q9CA64	1.1e-10	52.54	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q9LXG5	1.9e-10	43.28	Transcription factor PRE2 OS=Arabidopsis thaliana OX=3702 GN=PRE2 PE=1 SV=1	[more]
A2XD15	2.1e-09	42.31	Transcription factor ILI3 OS=Oryza sativa subsp. indica OX=39946 GN=ILI3 PE=3 SV...	[more]

BLAST of CaUC04G078330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ05	6.1e-28	83.75	DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1	[more]
A0A5A7SZP9	1.0e-27	81.48	Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B0J1	1.0e-27	81.48	transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1	[more]
A0A5D3BKI2	6.3e-25	81.33	Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A067K4V8	4.7e-12	55.56	BHLH domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_11607 PE=4 S...	[more]

BLAST of CaUC04G078330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28857.1	2.7e-12	44.93	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT1G26945.1	6.0e-12	43.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G74500.1	7.9e-12	52.54	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT5G15160.1	1.3e-11	43.28	BANQUO 2	[more]
AT3G47710.1	3.3e-10	39.24	BANQUO 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..67
None	No IPR available	PANTHER	PTHR38546:SF3	DNA BINDING PROTEIN	coord: 3..79
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 1..56 e-value: 0.0054 score: 26.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 9..51 e-value: 7.6E-8 score: 32.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 1..50 score: 9.864142
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 8..76 e-value: 1.3E-9 score: 40.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 9..61
IPR044172	Transcription factor ILI2-like	PANTHER	PTHR38546	DNA BINDING PROTEIN	coord: 3..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G078330.1	CaUC04G078330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity