CaUC03G053910 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAATGGTGAAGACGCCGAAAAATAGAATGGTATGGACGATAATAGCCTTGCCATTGGTGGTGAAGCTTCCGAATTCAACCATGCGAGAATTTCCGGGCAGCTGGAAAAGCAGCCCCGGCGAGAGGAGAATGAAGAGCAGTAATCCGAACAGAACCGGCGCCCAATCCAACATTGTTTATCGCTCCGGCTGCGGCTCCGGCACCGGCGACGACGAGTTCAACAAGCTTCAGAAGGAGGTGGGTGGTTTGTATTATCATACTTTTCCAGTCTATTTATAG ATGAGAATGGTGAAGACGCCGAAAAATAGAATGGTATGGACGATAATAGCCTTGCCATTGGTGGTGAAGCTTCCGAATTCAACCATGCGAGAATTTCCGGGCAGCTGGAAAAGCAGCCCCGGCGAGAGGAGAATGAAGAGCAGTAATCCGAACAGAACCGGCGCCCAATCCAACATTGTTTATCGCTCCGGCTGCGGCTCCGGCACCGGCGACGACGAGTTCAACAAGCTTCAGAAGGAGGTGGGTGGTTTGTATTATCATACTTTTCCAGTCTATTTATAG ATGAGAATGGTGAAGACGCCGAAAAATAGAATGGTATGGACGATAATAGCCTTGCCATTGGTGGTGAAGCTTCCGAATTCAACCATGCGAGAATTTCCGGGCAGCTGGAAAAGCAGCCCCGGCGAGAGGAGAATGAAGAGCAGTAATCCGAACAGAACCGGCGCCCAATCCAACATTGTTTATCGCTCCGGCTGCGGCTCCGGCACCGGCGACGACGAGTTCAACAAGCTTCAGAAGGAGGTGGGTGGTTTGTATTATCATACTTTTCCAGTCTATTTATAG MRMVKTPKNRMVWTIIALPLVVKLPNSTMREFPGSWKSSPGERRMKSSNPNRTGAQSNIVYRSGCGSGTGDDEFNKLQKEVGGLYYHTFPVYL Homology
BLAST of CaUC03G053910 vs. NCBI nr
Match: KAG6584156.1 (hypothetical protein SDJN03_20088, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21 Identity = 57/70 (81.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of CaUC03G053910 vs. NCBI nr
Match: PON95762.1 (hypothetical protein TorRG33x02_085910 [Trema orientale]) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of CaUC03G053910 vs. NCBI nr
Match: PON77275.1 (hypothetical protein PanWU01x14_028940 [Parasponia andersonii]) HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14 Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of CaUC03G053910 vs. NCBI nr
Match: OMO84140.1 (hypothetical protein CCACVL1_10983 [Corchorus capsularis]) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CaUC03G053910 vs. NCBI nr
Match: MBA0685522.1 (hypothetical protein [Gossypium aridum]) HSP 1 Score: 63.9 bits (154), Expect = 8.2e-07 Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of CaUC03G053910 vs. ExPASy TrEMBL
Match: A0A2P5FD82 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_085910 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.2e-15 Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of CaUC03G053910 vs. ExPASy TrEMBL
Match: A0A2P5DVF5 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_028940 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14 Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of CaUC03G053910 vs. ExPASy TrEMBL
Match: A0A1R3INM5 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_10983 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 6.2e-08 Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of CaUC03G053910 vs. ExPASy TrEMBL
Match: A0A7J8XEE1 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_013178 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.0e-07 Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of CaUC03G053910 vs. ExPASy TrEMBL
Match: A0A7J8M4G5 (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_016540 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.8e-07 Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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