CaUC02G036270 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G036270
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDetected protein of confused Function
LocationCiama_Chr02: 19567298 .. 19571298 (+)
RNA-Seq ExpressionCaUC02G036270
SyntenyCaUC02G036270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGGAGAATAAAATCGTTGGTAGATAAGTTCGTGGAGGAAGTGAAGGCGGAGGTGGAAGCGGATGTTGAAGATAGAATGAGGAAGGAGAAAGAGATGCAAATCGAACGAGAACAGGAAGCAACTGAGCGGGAAGCTGATTGGGAGGCCGAGCTTTCACGCCGAGAGGTACTCTGAAAATGCCCAACTCTCTTCTTCTTTCTCTTCTGCTCTCTTATTAAAGCTTTTGATTTAGGAAATTGTCATAAGCAAGGAAGGCTGCACCTAATATAACATTTCTGTTGGATGCTAGACAAACTGCACCTCTGGTGCAAAATTTCCAACTAAATAGAAATTTTTGTTTTTTCTTCAATTTCTACGAAATTTCGATCTGATTTTTCCATTTCGATCAAATTGTGACAATTTTGAGAAAATTTTGATTTTTTTTTAATTAACTATGCTAAATTCAAAATTTTCAATTTCCTAGTCTTGATTACTAGGGTTAGTAACAGGGACAAGGGTTTCCCCATTCCTGCCTTTTTAGGGAACTTACTCCCATCCCCGCTATAGGCGGGGATTCTCCGTCGGGGAAACAGGGCCCCATTCCCCATTTCCCCCTCCACAGGAGAGAGCGAGAGTGTGAAAGGGAGCGAGAAAGATAGAGTGATTGTGAGTAAGGAAAGAATGAGAGGAAGAGAGAGCGAGAGCGTGAATGTGAGAGAGAGCAAGAGAGATAGAGTGAGTGAGAGAGAGCGAGAGAGATAGAGTGATGGTGAGCGATAGCAAGAGTTAGTATATATAATATATATTTGGGGTTGGGATCGGGGAATCGGAATCGGGGTCGAGGCGGGAATACCCTCCTCGTCCCAGCCCTGTCCTCAGACAAGGATCCAAAAATGGTCCTCAGTTTGACCCTCATCTTCGATCAAACCGGGGATTCCCTGACCCGATTGGGATCAGGTCCCGCGGGATTTTTTTCAACCTTATTGATTACACACAATTCTATAAGTTCATATTGATAATGATTAAGTTTTTTTTTTTTTTTTTTTTGTGCTACTATTTTTAATTTTCAACTTTTCTCAATTTTTAGCTTTATTTTCAACCCAAAACTTTCATCTCTAAAGAAACTGAATTTGAAAAAACCACCAAAATTACATATATTTATTTTTAACCTCATTCAAACTTTTTTCATTAAATTTTCACATCATTTCACCTCAAAATTGAATTGATTTTTTTCTTTTACCACCCAAAACTTTTATAATTTTCATATTATTTCACCTCAAAATATTCATAAATTTTATGTTGTAATTATTTTTCCATTTCTTTTTAAAATTTATGCTTCACATCAACATTTACATAGACATTTACAATACACATCTAAATATTGTCTTACTTTATAGAAATTGTGATTAAAAATGGTCCGTTATAGTCTAATTAAGTTATAAATAAAGTTTCATTAATTAATTATAATAAATTTTCATCAATTTCCATAATTTTTCCCGAAATTTCCATTGATATTGATATTTCCATAAAATTGGGACTTTGATATTTTCATCAATATCAATATTTCAAACCTTGACTGTACCTAAAATCTTTCTTAAAAAATCACAAATAGCACATTATTTAAATTTCATCTTTCACAAATAACACATTATTTTGTCAATTATTTTAATAACATGTCTCGTATGTCCAAACCATCCATCCATCTTTATATCTTTCTCGGTGGGACCTCTACCATGACGAATATACTTAGGGTATGTTTAGAATACATTTTTAAGTGTTTAATTTAAAATATAAGTCATTTAGAAAATTTAGAGTGTTTGACAACCACTTAAAAAAGCTTTTGAAGTGTATTTTAAATCATTTTTATCAAAAGTGTTTAAATAAAAATGAGTTTTTCGAAAAACACTATTTTCTCAAGTCAATCCAAACAGGTTCTTAATTTTTCTCAAATAAATATTATGTAGGTAATCTTTTTTAATATTTTGTAAATATTATGCATAGAATAATTGTCGATCAATAGCTGGTTTGGATGTGCATTTAAAAATGTTAAACTTTTTGTTTCGGTCCTCATCCTAGTCAAGACGTATTGAAATGAGTCGTTAAAAGAATTGGTCAAAAAAAAGGTGTTATGAAAACTTTGACGGTTATTTCTAACAATTTTCATTTTGTGTTAAATAAGTTTTCAAATTTCAATTTTGCATATTTTCTAAAATTGACAAATTATTAGTTATAAAATTGAAATTTTGGGTTCTATTAACAAAACATTCAAAATTTTAATTTTTAAAAAAGTTAATCTTTTAAGAAAAAAATATTAAATATGTCAAGAACTCATTCGACACAAAATTGAAAGTTTTAAAAGGTTCATAAATCTATTAGAGTTCAAGATTTTTTTTTTTTCTTTTTTCGAAAGGTTTAAGTTCAAAAATTTATCGGGCATAAACTTGAAAATTTATTGACCGAACTTGTTACTATTTTTATATCATATTAAGTTAGCTAATACTAAAGATTACAAAACATATAGCAGAACGATTTCCTCTCGGTCAAGAGAACAAGCCTTAGTCGGTTTTGTTTAAGTTAGCTAATATTAAAGATTACAACCTAAATTACAAAGTTTGTCCTTGTGGTTTGAAGAAAGTCAAAATTTTATCAATATAATTTGATAAAACTTCATAAATAATTTCTATGATTTGACAACTCTTATAAATTGTATATGTAGTAGATTAAAATTTTCTCCAAAAAAAAAAACCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAGAAAACAAAATTGCGATTGCTATATGTTTTAGCCTTTATTGTCTCAATTTTTTTTTCATTATTTGGTCTTTTATGTTTAAAAATTTTCAATTTAGTCTCTTATATTATCAAAATTGCTTAATTATACCTTCACTATTGAGAAATATTAAAATTGGCTTGTAACAAATTTACATAACATGATACTAATTGAGTTGTAAAAGATTTTCAAGAAGAAAATTGGTCACCTAAGAGAGAAAAAAATTCTAATTCCTGTAAATTATTATTATTATTATTATGAACATAGCAGACACAATGTTGAAATTAATATTTAAAAAAGATTTGCATTCAAGAATTTAATTCCCATGCAAAATTTAGAAAAGAATATGATGCTTGTATTTTATCCAGGCAGAGATTGCACGACAAGAATTAAAGTTGAGAATGGAGAAGGAGGAGTTTGAAAACGAAAAAAGGGATCTTCTTACAAGACCTACATTCATCCAAGATGACAAAGATGGAGCTCTTGAAATCACTGTTAATGGTGACAAATACCGATGCCTCAGATTTGCCAAAGCTAAGAGATGA

mRNA sequence

ATGTTGTGGAGAATAAAATCGTTGGTAGATAAGTTCGTGGAGGAAGTGAAGGCGGAGGTGGAAGCGGATGTTGAAGATAGAATGAGGAAGGAGAAAGAGATGCAAATCGAACGAGAACAGGAAGCAACTGAGCGGGAAGCTGATTGGGAGGCCGAGCTTTCACGCCGAGAGGCAGAGATTGCACGACAAGAATTAAAGTTGAGAATGGAGAAGGAGGAGTTTGAAAACGAAAAAAGGGATCTTCTTACAAGACCTACATTCATCCAAGATGACAAAGATGGAGCTCTTGAAATCACTGTTAATGGTGACAAATACCGATGCCTCAGATTTGCCAAAGCTAAGAGATGA

Coding sequence (CDS)

ATGTTGTGGAGAATAAAATCGTTGGTAGATAAGTTCGTGGAGGAAGTGAAGGCGGAGGTGGAAGCGGATGTTGAAGATAGAATGAGGAAGGAGAAAGAGATGCAAATCGAACGAGAACAGGAAGCAACTGAGCGGGAAGCTGATTGGGAGGCCGAGCTTTCACGCCGAGAGGCAGAGATTGCACGACAAGAATTAAAGTTGAGAATGGAGAAGGAGGAGTTTGAAAACGAAAAAAGGGATCTTCTTACAAGACCTACATTCATCCAAGATGACAAAGATGGAGCTCTTGAAATCACTGTTAATGGTGACAAATACCGATGCCTCAGATTTGCCAAAGCTAAGAGATGA

Protein sequence

MLWRIKSLVDKFVEEVKAEVEADVEDRMRKEKEMQIEREQEATEREADWEAELSRREAEIARQELKLRMEKEEFENEKRDLLTRPTFIQDDKDGALEITVNGDKYRCLRFAKAKR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016900551.11.2e-2870.09PREDICTED: uncharacterized protein LOC103490446 [Cucumis melo] >KAA0047813.1 unc... [more]
XP_004139976.18.9e-2768.10uncharacterized protein LOC101213270 [Cucumis sativus] >KGN46645.1 hypothetical ... [more]
XP_017970845.19.8e-2664.41PREDICTED: uncharacterized protein LOC18608381 [Theobroma cacao] >XP_021274045.1... [more]
OMP11366.19.8e-2664.41hypothetical protein COLO4_03844 [Corchorus olitorius][more]
XP_022743995.11.3e-2564.41uncharacterized protein LOC111294953 [Durio zibethinus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BMP96.0e-2970.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DX446.0e-2970.09uncharacterized protein LOC103490446 OS=Cucumis melo OX=3656 GN=LOC103490446 PE=... [more]
A0A0A0KAA04.3e-2768.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117750 PE=4 SV=1[more]
A0A6J0ZHS14.7e-2664.41uncharacterized protein LOC110409121 OS=Herrania umbratica OX=108875 GN=LOC11040... [more]
A0A061E1K04.7e-2664.41Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_007592 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G17350.16.5e-2861.02unknown protein; Has 119 Blast hits to 93 proteins in 40 species: Archae - 0; Ba... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..84
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availablePANTHERPTHR35715:SF2OS08G0511800 PROTEINcoord: 1..114
NoneNo IPR availablePANTHERPTHR35715OS08G0511800 PROTEINcoord: 1..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G036270.1CaUC02G036270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016757 glycosyltransferase activity