CaUC02G026970 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTTCTCCAGACGCATTTCTCAACAAAACTCACGTATGTCACTTCTACTCTTTTCTTTTTTCGTGGAGCGGTTAAAACTACTTTTGTTATGTTCATAATCATTTTGAAACATGTTGGATTTGATTTTATGCGTAGGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATGGGGAGAAAAGGGGCGAAGACGGTTGAAGTAGCGGGGTCGAGTTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGGCTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTTCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATGGGGAGAAAAGGGGCGAAGACGGTTGAAGTAGCGGGGTCGAGTTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGGCTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTTCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATGGGGAGAAAAGGGGCGAAGACGGTTGAAGTAGCGGGGTCGAGTTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGGCTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA MKPSTWFSILFIAFLLFPIPIFSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAMGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP Homology
BLAST of CaUC02G026970 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus]) HSP 1 Score: 201.4 bits (511), Expect = 4.3e-48 Identity = 108/125 (86.40%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of CaUC02G026970 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]) HSP 1 Score: 194.9 bits (494), Expect = 4.0e-46 Identity = 96/120 (80.00%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of CaUC02G026970 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 8.9e-46 Identity = 103/124 (83.06%), Postives = 106/124 (85.48%), Query Frame = 0
BLAST of CaUC02G026970 vs. NCBI nr
Match: KAG6572355.1 (Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187.6 bits (475), Expect = 6.4e-44 Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = 0
BLAST of CaUC02G026970 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.0 bits (445), Expect = 1.9e-40 Identity = 93/129 (72.09%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.0e-25 Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.7e-11 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.4e-11 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.1e-05 Identity = 36/121 (29.75%), Postives = 57/121 (47.11%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.1e-48 Identity = 108/125 (86.40%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 4.3e-46 Identity = 103/124 (83.06%), Postives = 106/124 (85.48%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.3e-41 Identity = 93/129 (72.09%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 6.0e-40 Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0
BLAST of CaUC02G026970 vs. ExPASy TrEMBL
Match: A0A6J1GMI9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455631 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.3e-38 Identity = 85/120 (70.83%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of CaUC02G026970 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 ) HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26 Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of CaUC02G026970 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). ) HSP 1 Score: 68.6 bits (166), Expect = 4.0e-12 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of CaUC02G026970 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein ) HSP 1 Score: 68.2 bits (165), Expect = 5.2e-12 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CaUC02G026970 vs. TAIR 10
Match: AT2G30370.2 (allergen-related ) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 36/121 (29.75%), Postives = 57/121 (47.11%), Query Frame = 0
BLAST of CaUC02G026970 vs. TAIR 10
Match: AT2G30370.1 (allergen-related ) HSP 1 Score: 48.1 bits (113), Expect = 5.6e-06 Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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